RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SH3TC2Q8TF17 1288 aa13.43□□□□□ -0.26
SSBP3-206ENST00000420121 WDR18Q9BV38 432 aa13.43□□□□□ -0.26
SSBP3-206ENST00000420121 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
SSBP3-206ENST00000420121 CHMP4BQ9H444 224 aaKnown RBP13.43□□□□□ -0.26
SSBP3-206ENST00000420121 GOLIM4O00461 696 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 GDF11O95390 407 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 ASNSP08243 561 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 EN2P19622 333 aaPredicted RBP13.42□□□□□ -0.26
SSBP3-206ENST00000420121 EVX2Q03828 476 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 TTF1Q15361 905 aaPredicted RBP13.42□□□□□ -0.26
SSBP3-206ENST00000420121 SLFNL1Q499Z3 407 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 TATDN1Q6P1N9 297 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 DNAJC2Q99543 621 aaKnown RBP13.42□□□□□ -0.26
SSBP3-206ENST00000420121 EHD4Q9H223 541 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 ZBTB21Q9ULJ3 1066 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 GABRQQ9UN88 632 aa13.42□□□□□ -0.26
SSBP3-206ENST00000420121 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 ZNF532Q9HCE3 1301 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 SMARCA5O60264 1052 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-206ENST00000420121 FMNL1O95466 1100 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-206ENST00000420121 CHGBP05060 677 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 HLA-DOAP06340 250 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 ATP5JP18859 108 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 USP5P45974 858 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 PLCD1P51178 756 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 BACE1P56817 501 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 PRKCZQ05513 592 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 SLC9C2Q5TAH2 1124 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 CRACR2BQ8N4Y2 399 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-206ENST00000420121 BOLA2Q9H3K6 86 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 GINM1Q9NU53 330 aa13.41□□□□□ -0.26
SSBP3-206ENST00000420121 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 FCGRTP55899 365 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 GABPAQ06546 454 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 MTMR2Q13614 643 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 MTFR1Q15390 333 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 NBPF11Q86T75 865 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 LCORLQ8N3X6 602 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 HAUS7Q99871 368 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 LRRCC1Q9C099 1032 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 ASCC2Q9H1I8 757 aaPredicted RBP13.4□□□□□ -0.26
SSBP3-206ENST00000420121 DCTPP1Q9H773 170 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 AS3MTQ9HBK9 375 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 PAG1Q9NWQ8 432 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 SERPINB13Q9UIV8 391 aa13.4□□□□□ -0.26
SSBP3-206ENST00000420121 RLFQ13129 1914 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 GH2P01242 217 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 SHMT1P34896 483 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 ADD2P35612 726 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 FAM110CQ1W6H9 321 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 POTEEQ6S8J3 1075 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 ANKRD13CQ8N6S4 541 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 SMCR8Q8TEV9 937 aaPredicted RBP13.39□□□□□ -0.27
SSBP3-206ENST00000420121 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
SSBP3-206ENST00000420121 USP17L10C9JJH3 530 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 MYCP01106 439 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-206ENST00000420121 HOXD10P28358 340 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 HOXA7P31268 230 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-206ENST00000420121 GRK4P32298 578 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 GUCY1A2P33402 732 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 SDR42E1Q8WUS8 393 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 SHISA4Q96DD7 197 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-206ENST00000420121 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 PCDHB15Q9Y5E8 787 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
SSBP3-206ENST00000420121 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 SMIM22K7EJ46 135 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 PRKAB2O43741 272 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 PEX10O60683 326 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 CYP2D6P10635 497 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 FLT3LGP49771 235 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
SSBP3-206ENST00000420121 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
SSBP3-206ENST00000420121 RAET1EQ8TD07 263 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 TMEM106CQ9BVX2 250 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 TRIM34Q9BYJ4 488 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 CRNKL1Q9BZJ0 848 aaKnown RBP13.37□□□□□ -0.27
SSBP3-206ENST00000420121 MORF4L1Q9UBU8 362 aa13.37□□□□□ -0.27
SSBP3-206ENST00000420121 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-206ENST00000420121 TNPO2O14787 897 aaKnown RBP13.36□□□□□ -0.27
SSBP3-206ENST00000420121 MBD4O95243 580 aa13.36□□□□□ -0.27
SSBP3-206ENST00000420121 GCLCP48506 637 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-206ENST00000420121 IRF5Q13568 498 aa13.36□□□□□ -0.27
SSBP3-206ENST00000420121 CERKLQ49MI3 558 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-206ENST00000420121 ACER1Q8TDN7 264 aa13.36□□□□□ -0.27
SSBP3-206ENST00000420121 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
SSBP3-206ENST00000420121 P2RX7Q99572 595 aaKnown RBP13.36□□□□□ -0.27
SSBP3-206ENST00000420121 TXNRD2Q9NNW7 524 aa13.36□□□□□ -0.27
SSBP3-206ENST00000420121 MCM9Q9NXL9 1143 aa13.36□□□□□ -0.27
SSBP3-206ENST00000420121 A0A0G2JMZ2 1700 aa13.36□□□□□ -0.27
SSBP3-206ENST00000420121 CEP290O15078 2479 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 ELNP15502 786 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
SSBP3-206ENST00000420121 HERVK_113P62684 666 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 UBE3CQ15386 1083 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 ABCB5Q2M3G0 1257 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms