RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CTDSPL2Q05D32 466 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 RNF20Q5VTR2 975 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 DLK2Q6UY11 383 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 TBC1D10CQ8IV04 446 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 ZSCAN29Q8IWY8 852 aaPredicted RBP11.72□□□□□ -0.53
DDB1-202ENST00000414411 AMOTL1Q8IY63 956 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 CSRNP1Q96S65 589 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 INCENPQ9NQS7 918 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 SNX14Q9Y5W7 946 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 LAMB1P07942 1786 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 TBC1D12O60347 775 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 HLA-DOAP06340 250 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 SLURP2P0DP57 97 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 AKNAD1Q5T1N1 836 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 NBPF12Q5TAG4 269 aaPredicted RBP11.72□□□□□ -0.53
DDB1-202ENST00000414411 PRAMEF18Q5VWM3 479 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 STOX1Q6ZVD7 989 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 C16orf86Q6ZW13 317 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 USP48Q86UV5 1035 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
DDB1-202ENST00000414411 STAG1Q8WVM7 1258 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 DYNLL2Q96FJ2 89 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDB1-202ENST00000414411 ADM5C9JUS6 153 aa11.71□□□□□ -0.53
DDB1-202ENST00000414411 E7EWF7 191 aa11.71□□□□□ -0.53
DDB1-202ENST00000414411 PCP11498 1178 aaKnown RBP11.71□□□□□ -0.53
DDB1-202ENST00000414411 ZKSCAN1P17029 563 aaPredicted RBP11.71□□□□□ -0.53
DDB1-202ENST00000414411 YY1P25490 414 aa11.71□□□□□ -0.53
DDB1-202ENST00000414411 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.53
DDB1-202ENST00000414411 GLIS2Q9BZE0 524 aaPredicted RBP11.71□□□□□ -0.53
DDB1-202ENST00000414411 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.53
DDB1-202ENST00000414411 ORC4O43929 436 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 CDK8P49336 464 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 ADCK5Q3MIX3 580 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 TATDN1Q6P1N9 297 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 ARID3AQ99856 593 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 PANK2Q9BZ23 570 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 GRPEL1Q9HAV7 217 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 DDX49Q9Y6V7 483 aaKnown RBP11.7□□□□□ -0.54
DDB1-202ENST00000414411 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
DDB1-202ENST00000414411 SLC3A2P08195 630 aaKnown RBP11.7□□□□□ -0.54
DDB1-202ENST00000414411 SHMT1P34896 483 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 PDE4BQ07343 736 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 COL9A3Q14050 684 aaPredicted RBP11.7□□□□□ -0.54
DDB1-202ENST00000414411 MFSD6Q6ZSS7 791 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 NOL8Q76FK4 1167 aaKnown RBP11.7□□□□□ -0.54
DDB1-202ENST00000414411 ZNF784Q8NCA9 323 aaPredicted RBP11.7□□□□□ -0.54
DDB1-202ENST00000414411 SLC44A5Q8NCS7 719 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 LMBRD1Q9NUN5 540 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
DDB1-202ENST00000414411 SSC5DA1L4H1 1573 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 BRD1O95696 1058 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 KRT32Q14532 448 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 SUPT20HL1Q3ZLR7 823 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 CHADLQ6NUI6 762 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 MIGA2Q7L4E1 593 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 GAS2L3Q86XJ1 694 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 TTC14Q96N46 770 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
DDB1-202ENST00000414411 RNF41Q9H4P4 317 aaPredicted RBP11.69□□□□□ -0.54
DDB1-202ENST00000414411 FAM196BA6NMK8 535 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 PHF20L1A8MW92 1017 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 PRDM1O75626 825 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 RASA1P20936 1047 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 RRP1BQ14684 758 aaKnown RBP11.68□□□□□ -0.54
DDB1-202ENST00000414411 CRACR2BQ8N4Y2 399 aaPredicted RBP11.68□□□□□ -0.54
DDB1-202ENST00000414411 HOOK2Q96ED9 719 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 ZNF287Q9HBT7 754 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 NEDD4P46934 1319 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 TRAF5O00463 557 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 NT5C2P49902 561 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 KRT23Q9C075 422 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 CNNM2Q9H8M5 875 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.68□□□□□ -0.54
DDB1-202ENST00000414411 MKNK2Q9HBH9 465 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 ZSWIM6Q9HCJ5 1215 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 ZSWIM5Q9P217 1185 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
DDB1-202ENST00000414411 MYH8P13535 1937 aa11.67□□□□□ -0.54
DDB1-202ENST00000414411 USP2O75604 605 aaPredicted RBP11.67□□□□□ -0.54
DDB1-202ENST00000414411 EXOSC10Q01780 885 aaKnown RBP11.67□□□□□ -0.54
DDB1-202ENST00000414411 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.543e-7■■■■□ 20.9
DDB1-202ENST00000414411 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
DDB1-202ENST00000414411 FAM43AQ8N2R8 423 aa11.67□□□□□ -0.54
DDB1-202ENST00000414411 JAKMIP1Q96N16 626 aaKnown RBP11.67□□□□□ -0.54
DDB1-202ENST00000414411 B4E1Z4 1266 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 KDM4AO75164 1064 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 TRDNQ13061 729 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms