RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 CDC42BPGQ6DT37 1551 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 GOLGA8HP0CJ92 632 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 TNNT1P13805 278 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 SPA17Q15506 151 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 ARHGEF16Q5VV41 709 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 TDRD3Q9H7E2 651 aaKnown RBP11.41□□□□□ -0.58
KDM3A-202ENST00000409064 TTC12Q9H892 705 aaPredicted RBP11.41□□□□□ -0.58
KDM3A-202ENST00000409064 DEPDC5O75140 1603 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 SLC27A2O14975 620 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 ECE2O60344 883 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 DEXIO95424 95 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
KDM3A-202ENST00000409064 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 NAP1L4Q99733 375 aaKnown RBP11.41□□□□□ -0.58
KDM3A-202ENST00000409064 LRRC7Q96NW7 1537 aa11.41□□□□□ -0.58
KDM3A-202ENST00000409064 DNM2P50570 870 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 CTAGE5O15320 804 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 DKC1O60832 514 aaKnown RBP eCLIP11.4□□□□□ -0.58
KDM3A-202ENST00000409064 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
KDM3A-202ENST00000409064 ARHGAP29Q52LW3 1261 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 APBB1IPQ7Z5R6 666 aaPredicted RBP11.4□□□□□ -0.58
KDM3A-202ENST00000409064 TAF4BQ92750 862 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 SPAG5Q96R06 1193 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 ATP8A2Q9NTI2 1148 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 DBNLQ9UJU6 430 aaKnown RBP11.4□□□□□ -0.58
KDM3A-202ENST00000409064 CCPG1Q9ULG6 757 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 VWA3AA6NCI4 1184 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 DYNLL1P63167 89 aaKnown RBP11.4□□□□□ -0.58
KDM3A-202ENST00000409064 OSBPL3Q9H4L5 887 aa11.4□□□□□ -0.58
KDM3A-202ENST00000409064 SGSM2O43147 1006 aa11.4□□□□□ -0.59
KDM3A-202ENST00000409064 NEFHP12036 1026 aa11.4□□□□□ -0.59
KDM3A-202ENST00000409064 DNA2P51530 1060 aa11.4□□□□□ -0.59
KDM3A-202ENST00000409064 CCDC125Q86Z20 511 aa11.4□□□□□ -0.59
KDM3A-202ENST00000409064 PHKBQ93100 1093 aa11.4□□□□□ -0.59
KDM3A-202ENST00000409064 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.59
KDM3A-202ENST00000409064 PI4KBQ9UBF8 816 aa11.4□□□□□ -0.59
KDM3A-202ENST00000409064 AOX1Q06278 1338 aa11.4□□□□□ -0.59
KDM3A-202ENST00000409064 MYO3AQ8NEV4 1616 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 ARHGEF35A5YM69 484 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CCNT1O60563 726 aaKnown RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CIAO1O76071 339 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 NCAPH2Q6IBW4 605 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 IFT74Q96LB3 600 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 RMND1Q9NWS8 449 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 VWDEQ8N2E2 1590 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 REREQ9P2R6 1566 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 USP32Q8NFA0 1604 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 SPTLC2O15270 562 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 USP14P54578 494 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 PDE4DQ08499 809 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 REXO1Q8N1G1 1221 aaKnown RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 NUP88Q99567 741 aaPredicted RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 LZTS2Q9BRK4 669 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 MINPP1Q9UNW1 487 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 SSH2Q76I76 1423 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 ANKRD62A6NC57 917 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 KLRF2D3W0D1 207 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 NONOQ15233 471 aaKnown RBP eCLIP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 GRIPAP1Q4V328 841 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 METTL13Q8N6R0 699 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 DHX36Q9H2U1 1008 aaKnown RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CD209Q9NNX6 404 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 DIP2CQ9Y2E4 1556 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 MRPL11Q9Y3B7 192 aaKnown RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CLTCQ00610 1675 aaKnown RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CDK12Q9NYV4 1490 aaPredicted RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CCP110O43303 1012 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 LPXNO60711 386 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 GADD45BO75293 160 aaPredicted RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 SMTNP53814 917 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CBX1P83916 185 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 FBXO11Q86XK2 927 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 ZNF354CQ86Y25 554 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CCDC97Q96F63 343 aaPredicted RBP11.39□□□□□ -0.59
KDM3A-202ENST00000409064 CHAMP1Q96JM3 812 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 WRNIP1Q96S55 665 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 TRPC6Q9Y210 931 aa11.39□□□□□ -0.59
KDM3A-202ENST00000409064 PSMA7O14818 248 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 SYT1P21579 422 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 CDR1P51861 262 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 HSP90AA4PQ58FG1 418 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 HAUS7Q99871 368 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 ADGRB1O14514 1584 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 CTNNA2P26232 953 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 FAM114A1Q8IWE2 563 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 DIS3L2Q8IYB7 885 aaKnown RBP11.38□□□□□ -0.59
KDM3A-202ENST00000409064 KANSL2Q9H9L4 492 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 PODXL2Q9NZ53 605 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 ZHX1Q9UKY1 873 aaPredicted RBP11.38□□□□□ -0.59
KDM3A-202ENST00000409064 SHPRHQ149N8 1683 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 RPS6KB1P23443 525 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 DNM1Q05193 864 aaKnown RBP11.38□□□□□ -0.59
KDM3A-202ENST00000409064 UBE3CQ15386 1083 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 ZNF654Q8IZM8 581 aa11.38□□□□□ -0.59
KDM3A-202ENST00000409064 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
KDM3A-202ENST00000409064 N4BP3O15049 544 aa11.37□□□□□ -0.59
KDM3A-202ENST00000409064 FGAP02671 866 aa11.37□□□□□ -0.59
KDM3A-202ENST00000409064 HAUS3Q68CZ6 603 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms