RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 CACNA1SQ13698 1873 aa17.55■□□□□ 0.4
LIMK2-204ENST00000406516 GSDMDP57764 484 aa17.55■□□□□ 0.4
LIMK2-204ENST00000406516 CPLX2Q6PUV4 134 aaKnown RBP17.55■□□□□ 0.4
LIMK2-204ENST00000406516 TMC6Q7Z403 805 aa17.55■□□□□ 0.4
LIMK2-204ENST00000406516 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
LIMK2-204ENST00000406516 SPDYE4A6NLX3 237 aa17.55■□□□□ 0.4
LIMK2-204ENST00000406516 UBE2Q2LH0YL09 131 aa17.55■□□□□ 0.4
LIMK2-204ENST00000406516 ZBTB43O43298 467 aa17.55■□□□□ 0.4
LIMK2-204ENST00000406516 U2AF2P26368 475 aaKnown RBP eCLIP17.55■□□□□ 0.48e-7■■□□□ 13.2
LIMK2-204ENST00000406516 SYKP43405 635 aa17.55■□□□□ 0.4
LIMK2-204ENST00000406516 GOLGA8AA7E2F4 631 aa17.54■□□□□ 0.4
LIMK2-204ENST00000406516 TMEM67Q5HYA8 995 aa17.54■□□□□ 0.4
LIMK2-204ENST00000406516 NYAP1Q6ZVC0 841 aa17.54■□□□□ 0.4
LIMK2-204ENST00000406516 CCAR2Q8N163 923 aaKnown RBP17.54■□□□□ 0.4
LIMK2-204ENST00000406516 STRBPQ96SI9 672 aaKnown RBP17.54■□□□□ 0.4
LIMK2-204ENST00000406516 TCRBV5S4A2TA0A5A2 114 aa17.54■□□□□ 0.4
LIMK2-204ENST00000406516 ARID4AP29374 1257 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-204ENST00000406516 CCDC93Q567U6 631 aa17.54■□□□□ 0.4
LIMK2-204ENST00000406516 SMAP1Q8IYB5 467 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-204ENST00000406516 GPR101Q96P66 508 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-204ENST00000406516 OSBPL5Q9H0X9 879 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-204ENST00000406516 TMX4Q9H1E5 349 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-204ENST00000406516 POLLQ9UGP5 575 aa17.54■□□□□ 0.4
LIMK2-204ENST00000406516 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
LIMK2-204ENST00000406516 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
LIMK2-204ENST00000406516 IARSP41252 1262 aaKnown RBP17.53■□□□□ 0.4
LIMK2-204ENST00000406516 TPM4P67936 248 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 CTDSPL2Q05D32 466 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 NCAPHQ15003 741 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 SHC4Q6S5L8 630 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 IGDCC4Q8TDY8 1250 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 TMEM87BQ96K49 555 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 LY9Q9HBG7 655 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 UQCRFS1P1P0C7P4 283 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 PUM3Q15397 648 aaKnown RBP17.53■□□□□ 0.4
LIMK2-204ENST00000406516 DPP8Q6V1X1 898 aaPredicted RBP17.53■□□□□ 0.4
LIMK2-204ENST00000406516 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 MAGEB6Q8N7X4 407 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 IMPACTQ9P2X3 320 aa17.53■□□□□ 0.4
LIMK2-204ENST00000406516 SNED1Q8TER0 1413 aa17.52■□□□□ 0.4
LIMK2-204ENST00000406516 MBD4O95243 580 aa17.52■□□□□ 0.4
LIMK2-204ENST00000406516 TRIM29Q14134 588 aa17.52■□□□□ 0.4
LIMK2-204ENST00000406516 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
LIMK2-204ENST00000406516 NAPBQ9H115 298 aa17.52■□□□□ 0.4
LIMK2-204ENST00000406516 EPB41L4AQ9HCS5 686 aaPredicted RBP17.52■□□□□ 0.4
LIMK2-204ENST00000406516 MROH5Q6ZUA9 1318 aa17.52■□□□□ 0.4
LIMK2-204ENST00000406516 NFKBIEO00221 500 aa17.52■□□□□ 0.39
LIMK2-204ENST00000406516 PTPAQ15257 358 aa17.52■□□□□ 0.39
LIMK2-204ENST00000406516 NTRK3Q16288 839 aa17.52■□□□□ 0.39
LIMK2-204ENST00000406516 JMYQ8N9B5 988 aa17.52■□□□□ 0.39
LIMK2-204ENST00000406516 LPIN2Q92539 896 aa17.52■□□□□ 0.39
LIMK2-204ENST00000406516 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.39
LIMK2-204ENST00000406516 PODXL2Q9NZ53 605 aa17.52■□□□□ 0.39
LIMK2-204ENST00000406516 IFIT3O14879 490 aaKnown RBP17.51■□□□□ 0.39
LIMK2-204ENST00000406516 PNOCQ13519 176 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 ARMCX5Q6P1M9 558 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 RTKN2Q8IZC4 609 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 SPATA5Q8NB90 893 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 TBC1D16Q8TBP0 767 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 ANKRD2Q9GZV1 360 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 ARMT1Q9H993 441 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 FAM217BQ9NTX9 383 aaPredicted RBP17.51■□□□□ 0.39
LIMK2-204ENST00000406516 XDHP47989 1333 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 C6orf229H3BNL8 230 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 PPP6R2O75170 966 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 ATP1A3P13637 1013 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 IFNL3Q8IZI9 196 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 MAP3K14Q99558 947 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 ZSWIM5Q9P217 1185 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 HPSEQ9Y251 543 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 SLC12A7Q9Y666 1083 aa17.51■□□□□ 0.39
LIMK2-204ENST00000406516 UFL1O94874 794 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 SFPQP23246 707 aaKnown RBP eCLIP17.5■□□□□ 0.39
LIMK2-204ENST00000406516 RASSF7Q02833 373 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 RASGRF1Q13972 1273 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 SYCP1Q15431 976 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 STK11IPQ8N1F8 1099 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 TIGD1Q96MW7 591 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 PATL2C9JE40 543 aaKnown RBP17.5■□□□□ 0.39
LIMK2-204ENST00000406516 KLRK1P26718 216 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 FANCCQ00597 558 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 RRP12Q5JTH9 1297 aaKnown RBP17.5■□□□□ 0.39
LIMK2-204ENST00000406516 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 CCDC150Q8NCX0 1101 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.5■□□□□ 0.39
LIMK2-204ENST00000406516 TOMM22Q9NS69 142 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 GGA1Q9UJY5 639 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 TACC3Q9Y6A5 838 aa17.5■□□□□ 0.39
LIMK2-204ENST00000406516 FGFR2P21802 821 aa17.49■□□□□ 0.39
LIMK2-204ENST00000406516 PRELPP51888 382 aa17.49■□□□□ 0.39
LIMK2-204ENST00000406516 MAP3K12Q12852 859 aa17.49■□□□□ 0.39
LIMK2-204ENST00000406516 TXNRD3Q86VQ6 643 aa17.49■□□□□ 0.39
LIMK2-204ENST00000406516 PKNOX2Q96KN3 472 aa17.49■□□□□ 0.39
LIMK2-204ENST00000406516 ZNF277Q9NRM2 450 aaPredicted RBP17.49■□□□□ 0.39
LIMK2-204ENST00000406516 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.49■□□□□ 0.39
LIMK2-204ENST00000406516 V9GYY5 206 aaPredicted RBP17.49■□□□□ 0.39
LIMK2-204ENST00000406516 ZNF804BA4D1E1 1349 aa17.49■□□□□ 0.39
LIMK2-204ENST00000406516 E4F1Q66K89 784 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms