RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 CDK5RAP2Q96SN8 1893 aa16.09■□□□□ 0.17
SDF4-203ENST00000403997 PHIPQ8WWQ0 1821 aa16.08■□□□□ 0.17
SDF4-203ENST00000403997 GH2P01242 217 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 OSBPP22059 807 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 PLCD1P51178 756 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 FCGRTP55899 365 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 BACE1P56817 501 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 PABPC4Q13310 644 aaKnown RBP eCLIP16.08■□□□□ 0.16
SDF4-203ENST00000403997 MTMR2Q13614 643 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 SH3D19Q5HYK7 790 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 SDR42E1Q8WUS8 393 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 CRBNQ96SW2 442 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 EHD4Q9H223 541 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 FOCADQ5VW36 1801 aa16.08■□□□□ 0.16
SDF4-203ENST00000403997 C19orf81C9J6K1 198 aa16.07■□□□□ 0.16
SDF4-203ENST00000403997 USP17L10C9JJH3 530 aa16.07■□□□□ 0.16
SDF4-203ENST00000403997 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
SDF4-203ENST00000403997 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
SDF4-203ENST00000403997 TATDN1Q6P1N9 297 aa16.07■□□□□ 0.16
SDF4-203ENST00000403997 ANKRD13CQ8N6S4 541 aa16.07■□□□□ 0.16
SDF4-203ENST00000403997 SRRDQ9UH36 339 aa16.07■□□□□ 0.16
SDF4-203ENST00000403997 SIPA1L1O43166 1804 aa16.07■□□□□ 0.16
SDF4-203ENST00000403997 MYH1P12882 1939 aa16.07■□□□□ 0.16
SDF4-203ENST00000403997 PTPRFP10586 1907 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 POTEFA5A3E0 1075 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 MBD4O95243 580 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 UBE3CQ15386 1083 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 RAET1EQ8TD07 263 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 SH3TC2Q8TF17 1288 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 ZNF333Q96JL9 665 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 DCP1AQ9NPI6 582 aaPredicted RBP16.06■□□□□ 0.16
SDF4-203ENST00000403997 HTTP42858 3142 aa16.06■□□□□ 0.16
SDF4-203ENST00000403997 ATAD5Q96QE3 1844 aa16.05■□□□□ 0.16
SDF4-203ENST00000403997 MYPNQ86TC9 1320 aa16.05■□□□□ 0.16
SDF4-203ENST00000403997 PRKAB2O43741 272 aa16.05■□□□□ 0.16
SDF4-203ENST00000403997 MYCP01106 439 aaPredicted RBP16.05■□□□□ 0.16
SDF4-203ENST00000403997 CHGBP05060 677 aa16.05■□□□□ 0.16
SDF4-203ENST00000403997 RAB3GAP1Q15042 981 aa16.05■□□□□ 0.16
SDF4-203ENST00000403997 ABCB5Q2M3G0 1257 aa16.05■□□□□ 0.16
SDF4-203ENST00000403997 TSHZ3Q63HK5 1081 aa16.05■□□□□ 0.16
SDF4-203ENST00000403997 ASCC2Q9H1I8 757 aaPredicted RBP16.05■□□□□ 0.16
SDF4-203ENST00000403997 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
SDF4-203ENST00000403997 KIAA0100Q14667 2235 aaKnown RBP16.04■□□□□ 0.16
SDF4-203ENST00000403997 ZSWIM8A7E2V4 1837 aa16.04■□□□□ 0.16
SDF4-203ENST00000403997 CYP2D6P10635 497 aa16.04■□□□□ 0.16
SDF4-203ENST00000403997 SHMT1P34896 483 aa16.04■□□□□ 0.16
SDF4-203ENST00000403997 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
SDF4-203ENST00000403997 IRX3P78415 501 aaPredicted RBP16.04■□□□□ 0.16
SDF4-203ENST00000403997 GABPAQ06546 454 aa16.04■□□□□ 0.16
SDF4-203ENST00000403997 USP17L2Q6R6M4 530 aa16.04■□□□□ 0.16
SDF4-203ENST00000403997 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
SDF4-203ENST00000403997 CENPFP49454 3210 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 TNPO2O14787 897 aaKnown RBP16.03■□□□□ 0.16
SDF4-203ENST00000403997 HOXA7P31268 230 aaPredicted RBP16.03■□□□□ 0.16
SDF4-203ENST00000403997 EVX2Q03828 476 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 PRKCZQ05513 592 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 FAM110CQ1W6H9 321 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 DDRGK1Q96HY6 314 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 FEZ1Q99689 392 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
SDF4-203ENST00000403997 EMILIN3Q9NT22 766 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
SDF4-203ENST00000403997 GABRQQ9UN88 632 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 SLC4A4Q9Y6R1 1079 aa16.03■□□□□ 0.16
SDF4-203ENST00000403997 MPHOSPH10O00566 681 aaKnown RBP16.02■□□□□ 0.16
SDF4-203ENST00000403997 EN2P19622 333 aaPredicted RBP16.02■□□□□ 0.16
SDF4-203ENST00000403997 GRK4P32298 578 aa16.02■□□□□ 0.16
SDF4-203ENST00000403997 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.16
SDF4-203ENST00000403997 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
SDF4-203ENST00000403997 KBTBD3Q8NAB2 608 aa16.02■□□□□ 0.16
SDF4-203ENST00000403997 P2RX7Q99572 595 aaKnown RBP16.02■□□□□ 0.16
SDF4-203ENST00000403997 BIN2Q9UBW5 565 aaPredicted RBP16.02■□□□□ 0.16
SDF4-203ENST00000403997 USP17L12C9JPN9 530 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 USP17L21D6R901 530 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 ERC2O15083 957 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 FLT3LGP49771 235 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 USP14P54578 494 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 SEPT2Q15019 361 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 ANKRD45Q5TZF3 282 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 SLC44A5Q8NCS7 719 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 ACER1Q8TDN7 264 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 COA7Q96BR5 231 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 DYNLL2Q96FJ2 89 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 SWAP70Q9UH65 585 aa16.01■□□□□ 0.15
SDF4-203ENST00000403997 TTC41PQ6P2S7 1318 aa16■□□□□ 0.15
SDF4-203ENST00000403997 RNF113AO15541 343 aaKnown RBP16■□□□□ 0.15
SDF4-203ENST00000403997 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
SDF4-203ENST00000403997 GUCY1A2P33402 732 aa16■□□□□ 0.15
SDF4-203ENST00000403997 HERVK_113P62684 666 aa16■□□□□ 0.15
SDF4-203ENST00000403997 OTUD7AQ8TE49 926 aaPredicted RBP16■□□□□ 0.15
SDF4-203ENST00000403997 STRBPQ96SI9 672 aaKnown RBP16■□□□□ 0.15
SDF4-203ENST00000403997 KIAA1683Q9H0B3 1180 aa16■□□□□ 0.15
SDF4-203ENST00000403997 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
SDF4-203ENST00000403997 LOC285556D6RIA3 1793 aa16■□□□□ 0.15
SDF4-203ENST00000403997 CYP2D7A0A087X1C5 515 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 ADCY3O60266 1144 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 ZFYP08048 801 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 249.7 ms