RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 EPS15P42566 896 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 FAM83AQ86UY5 434 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 IQCA1Q86XH1 822 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 ZSCAN29Q8IWY8 852 aaPredicted RBP32.31■■■□□ 2.76
CPNE1-203ENST00000397442 ZNF444Q8N0Y2 327 aaPredicted RBP32.31■■■□□ 2.76
CPNE1-203ENST00000397442 ENAHQ8N8S7 591 aaPredicted RBP32.31■■■□□ 2.76
CPNE1-203ENST00000397442 SWAP70Q9UH65 585 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 MYH8P13535 1937 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 NMT2O60551 498 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 METTL16Q86W50 562 aaKnown RBP32.31■■■□□ 2.76
CPNE1-203ENST00000397442 GTF3C6Q969F1 213 aa32.31■■■□□ 2.76
CPNE1-203ENST00000397442 ASTN2O75129 1339 aaPredicted RBP32.3■■■□□ 2.76
CPNE1-203ENST00000397442 SHMT1P34896 483 aa32.3■■■□□ 2.76
CPNE1-203ENST00000397442 WTAPQ15007 396 aa32.3■■■□□ 2.76
CPNE1-203ENST00000397442 TRPM4Q8TD43 1214 aa32.3■■■□□ 2.76
CPNE1-203ENST00000397442 IL17RBQ9NRM6 502 aa32.3■■■□□ 2.76
CPNE1-203ENST00000397442 HPS5Q9UPZ3 1129 aa32.3■■■□□ 2.76
CPNE1-203ENST00000397442 ERICH2A1L162 156 aa32.29■■■□□ 2.76
CPNE1-203ENST00000397442 SCRN1Q12765 414 aa32.29■■■□□ 2.76
CPNE1-203ENST00000397442 PGAP2Q9UHJ9 254 aa32.29■■■□□ 2.76
CPNE1-203ENST00000397442 APOA5Q6Q788 366 aa32.28■■■□□ 2.76
CPNE1-203ENST00000397442 FOXP4Q8IVH2 680 aaPredicted RBP32.28■■■□□ 2.76
CPNE1-203ENST00000397442 TAOK2Q9UL54 1235 aa32.28■■■□□ 2.76
CPNE1-203ENST00000397442 ZC3H4Q9UPT8 1303 aaKnown RBP32.28■■■□□ 2.76
CPNE1-203ENST00000397442 CSRNP1Q96S65 589 aa32.27■■■□□ 2.76
CPNE1-203ENST00000397442 TMEM39BQ9GZU3 492 aa32.27■■■□□ 2.76
CPNE1-203ENST00000397442 TCP11L1Q9NUJ3 509 aa32.27■■■□□ 2.76
CPNE1-203ENST00000397442 TSPY3P0CV98 308 aa32.27■■■□□ 2.76
CPNE1-203ENST00000397442 TSPY8P0CW00 308 aa32.27■■■□□ 2.76
CPNE1-203ENST00000397442 TMTC2Q8N394 836 aa32.27■■■□□ 2.76
CPNE1-203ENST00000397442 HACL1Q9UJ83 578 aa32.27■■■□□ 2.76
CPNE1-203ENST00000397442 GOLGA8BA8MQT2 603 aa32.26■■■□□ 2.75
CPNE1-203ENST00000397442 HIRAP54198 1017 aaPredicted RBP32.26■■■□□ 2.75
CPNE1-203ENST00000397442 RCSD1Q6JBY9 416 aa32.26■■■□□ 2.75
CPNE1-203ENST00000397442 NFXL1Q6ZNB6 911 aa32.26■■■□□ 2.75
CPNE1-203ENST00000397442 NEDD1Q8NHV4 660 aa32.26■■■□□ 2.75
CPNE1-203ENST00000397442 NAP1L2Q9ULW6 460 aaPredicted RBP32.26■■■□□ 2.75
CPNE1-203ENST00000397442 FAM196BA6NMK8 535 aa32.25■■■□□ 2.75
CPNE1-203ENST00000397442 CDAN1Q8IWY9 1227 aa32.25■■■□□ 2.75
CPNE1-203ENST00000397442 CRACR2BQ8N4Y2 399 aaPredicted RBP32.25■■■□□ 2.75
CPNE1-203ENST00000397442 CCDC69A6NI79 296 aa32.24■■■□□ 2.75
CPNE1-203ENST00000397442 CCT2P78371 535 aaKnown RBP32.24■■■□□ 2.75
CPNE1-203ENST00000397442 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.24■■■□□ 2.75
CPNE1-203ENST00000397442 NCOA5Q9HCD5 579 aaKnown RBP32.24■■■□□ 2.75
CPNE1-203ENST00000397442 CWC22Q9HCG8 908 aaKnown RBP32.24■■■□□ 2.75
CPNE1-203ENST00000397442 SCAF8Q9UPN6 1271 aaKnown RBP32.24■■■□□ 2.75
CPNE1-203ENST00000397442 ZSCAN21Q9Y5A6 473 aaPredicted RBP32.24■■■□□ 2.75
CPNE1-203ENST00000397442 PLIN4Q96Q06 1357 aa32.24■■■□□ 2.75
CPNE1-203ENST00000397442 DPY19L2Q6NUT2 758 aa32.24■■■□□ 2.75
CPNE1-203ENST00000397442 TATDN1Q6P1N9 297 aa32.24■■■□□ 2.75
CPNE1-203ENST00000397442 RAB11FIP4Q86YS3 637 aa32.24■■■□□ 2.75
CPNE1-203ENST00000397442 L3MBTL3Q96JM7 780 aaPredicted RBP32.24■■■□□ 2.75
CPNE1-203ENST00000397442 SLC12A7Q9Y666 1083 aa32.24■■■□□ 2.75
CPNE1-203ENST00000397442 GREB1LQ9C091 1923 aaPredicted RBP32.23■■■□□ 2.75
CPNE1-203ENST00000397442 DTNBO60941 627 aa32.23■■■□□ 2.75
CPNE1-203ENST00000397442 AKR1B1P15121 316 aa32.23■■■□□ 2.75
CPNE1-203ENST00000397442 TNNI2P48788 182 aa32.23■■■□□ 2.75
CPNE1-203ENST00000397442 RASA3Q14644 834 aa32.23■■■□□ 2.75
CPNE1-203ENST00000397442 IFIT1BQ5T764 474 aaKnown RBP32.23■■■□□ 2.75
CPNE1-203ENST00000397442 ANKS1AQ92625 1134 aa32.23■■■□□ 2.75
CPNE1-203ENST00000397442 TNFAIP1Q13829 316 aa32.22■■■□□ 2.75
CPNE1-203ENST00000397442 MYL10Q9BUA6 226 aa32.22■■■□□ 2.75
CPNE1-203ENST00000397442 LMOD1P29536 600 aaPredicted RBP32.21■■■□□ 2.75
CPNE1-203ENST00000397442 DGKHQ86XP1 1220 aa32.21■■■□□ 2.75
CPNE1-203ENST00000397442 TEPSINQ96N21 525 aa32.21■■■□□ 2.75
CPNE1-203ENST00000397442 ADARB2Q9NS39 739 aaKnown RBP32.21■■■□□ 2.75
CPNE1-203ENST00000397442 NID2Q14112 1375 aa32.21■■■□□ 2.75
CPNE1-203ENST00000397442 ZBTB43O43298 467 aa32.21■■■□□ 2.75
CPNE1-203ENST00000397442 RXRAP19793 462 aa32.21■■■□□ 2.75
CPNE1-203ENST00000397442 CCDC178Q5BJE1 867 aa32.21■■■□□ 2.75
CPNE1-203ENST00000397442 ZNF654Q8IZM8 581 aa32.21■■■□□ 2.75
CPNE1-203ENST00000397442 HERC5Q9UII4 1024 aaKnown RBP32.21■■■□□ 2.75
CPNE1-203ENST00000397442 IGKV6D-41A0A0C4DH26 115 aa32.2■■■□□ 2.74
CPNE1-203ENST00000397442 CTDNEP1O95476 244 aa32.2■■■□□ 2.74
CPNE1-203ENST00000397442 NOVP48745 357 aa32.2■■■□□ 2.74
CPNE1-203ENST00000397442 ANGEL2Q5VTE6 544 aaKnown RBP32.2■■■□□ 2.74
CPNE1-203ENST00000397442 MICU3Q86XE3 530 aa32.2■■■□□ 2.74
CPNE1-203ENST00000397442 GLTPD2A6NH11 291 aa32.19■■■□□ 2.74
CPNE1-203ENST00000397442 RCAN1P53805 252 aa32.19■■■□□ 2.74
CPNE1-203ENST00000397442 CCDC17Q96LX7 622 aa32.19■■■□□ 2.74
CPNE1-203ENST00000397442 TRIM34Q9BYJ4 488 aa32.19■■■□□ 2.74
CPNE1-203ENST00000397442 SMC3Q9UQE7 1217 aa32.19■■■□□ 2.74
CPNE1-203ENST00000397442 METAP2P50579 478 aaKnown RBP eCLIP32.18■■■□□ 2.74
CPNE1-203ENST00000397442 CEP95Q96GE4 821 aa32.18■■■□□ 2.74
CPNE1-203ENST00000397442 LLPHQ9BRT6 129 aaKnown RBP32.18■■■□□ 2.74
CPNE1-203ENST00000397442 FAM217BQ9NTX9 383 aaPredicted RBP32.18■■■□□ 2.74
CPNE1-203ENST00000397442 CIZ1Q9ULV3 898 aaPredicted RBP32.18■■■□□ 2.74
CPNE1-203ENST00000397442 NSUN7Q8NE18 718 aaKnown RBP32.18■■■□□ 2.74
CPNE1-203ENST00000397442 DEFB129Q9H1M3 183 aa32.18■■■□□ 2.74
CPNE1-203ENST00000397442 CHMP5Q9NZZ3 219 aa32.18■■■□□ 2.74
CPNE1-203ENST00000397442 TBC1D12O60347 775 aa32.17■■■□□ 2.74
CPNE1-203ENST00000397442 CDC27P30260 824 aa32.17■■■□□ 2.74
CPNE1-203ENST00000397442 MAP3K10Q02779 954 aa32.17■■■□□ 2.74
CPNE1-203ENST00000397442 CERKLQ49MI3 558 aaPredicted RBP32.17■■■□□ 2.74
CPNE1-203ENST00000397442 SYNE3Q6ZMZ3 975 aa32.17■■■□□ 2.74
CPNE1-203ENST00000397442 SMARCC2Q8TAQ2 1214 aa32.17■■■□□ 2.74
CPNE1-203ENST00000397442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.17■■■□□ 2.749e-8■■■■■ 116.8
CPNE1-203ENST00000397442 GGA3Q9NZ52 723 aa32.17■■■□□ 2.74
CPNE1-203ENST00000397442 JAK2O60674 1132 aa32.16■■■□□ 2.74
CPNE1-203ENST00000397442 GJB2P29033 226 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms