RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 MPHOSPH10O00566 681 aaKnown RBP35.03■■■■□ 3.2
CHCHD4-202ENST00000396914 IRF6O14896 467 aa35.03■■■■□ 3.2
CHCHD4-202ENST00000396914 FOXP2O15409 715 aa35.03■■■■□ 3.2
CHCHD4-202ENST00000396914 ASNSP08243 561 aa35.03■■■■□ 3.2
CHCHD4-202ENST00000396914 CDK8P49336 464 aa35.03■■■■□ 3.2
CHCHD4-202ENST00000396914 CABP5Q9NP86 173 aa35.03■■■■□ 3.2
CHCHD4-202ENST00000396914 SLC3A2P08195 630 aaKnown RBP35.02■■■■□ 3.2
CHCHD4-202ENST00000396914 GTF2A2P52657 109 aa35.02■■■■□ 3.2
CHCHD4-202ENST00000396914 ABCB5Q2M3G0 1257 aa35.02■■■■□ 3.2
CHCHD4-202ENST00000396914 C16orf86Q6ZW13 317 aa35.02■■■■□ 3.2
CHCHD4-202ENST00000396914 REM2Q8IYK8 340 aaPredicted RBP35.02■■■■□ 3.2
CHCHD4-202ENST00000396914 RAD50Q92878 1312 aa35.02■■■■□ 3.2
CHCHD4-202ENST00000396914 GH2P01242 217 aa35.01■■■■□ 3.2
CHCHD4-202ENST00000396914 PPARAQ07869 468 aa35.01■■■■□ 3.2
CHCHD4-202ENST00000396914 SHROOM1Q2M3G4 852 aaPredicted RBP35.01■■■■□ 3.2
CHCHD4-202ENST00000396914 MKNK2Q9HBH9 465 aa35.01■■■■□ 3.2
CHCHD4-202ENST00000396914 ZBTB21Q9ULJ3 1066 aa35.01■■■■□ 3.2
CHCHD4-202ENST00000396914 LAMB1P07942 1786 aa35.01■■■■□ 3.19
CHCHD4-202ENST00000396914 FGAP02671 866 aa35■■■■□ 3.19
CHCHD4-202ENST00000396914 JAG1P78504 1218 aa35■■■■□ 3.19
CHCHD4-202ENST00000396914 SNAPC2Q13487 334 aa35■■■■□ 3.19
CHCHD4-202ENST00000396914 TAOK2Q9UL54 1235 aa35■■■■□ 3.19
CHCHD4-202ENST00000396914 USP17L5A8MUK1 530 aa34.99■■■■□ 3.19
CHCHD4-202ENST00000396914 RAB3GAP1Q15042 981 aa34.99■■■■□ 3.19
CHCHD4-202ENST00000396914 ALX1Q15699 326 aa34.99■■■■□ 3.19
CHCHD4-202ENST00000396914 CASC1Q6TDU7 716 aa34.99■■■■□ 3.19
CHCHD4-202ENST00000396914 IL25Q9H293 177 aa34.99■■■■□ 3.19
CHCHD4-202ENST00000396914 TRIM75PA6NK02 468 aa34.98■■■■□ 3.19
CHCHD4-202ENST00000396914 GINM1Q9NU53 330 aa34.98■■■■□ 3.19
CHCHD4-202ENST00000396914 MYH8P13535 1937 aa34.98■■■■□ 3.19
CHCHD4-202ENST00000396914 CCL15-CCL14A0A0B4J2E2 113 aa34.98■■■■□ 3.19
CHCHD4-202ENST00000396914 INHBEP58166 350 aa34.98■■■■□ 3.19
CHCHD4-202ENST00000396914 CCL15Q16663 113 aa34.98■■■■□ 3.19
CHCHD4-202ENST00000396914 AS3MTQ9HBK9 375 aa34.98■■■■□ 3.19
CHCHD4-202ENST00000396914 ZNF287Q9HBT7 754 aa34.98■■■■□ 3.19
CHCHD4-202ENST00000396914 CETPP11597 493 aa34.97■■■■□ 3.19
CHCHD4-202ENST00000396914 CTDSPL2Q05D32 466 aa34.97■■■■□ 3.19
CHCHD4-202ENST00000396914 AFG3L2Q9Y4W6 797 aa34.97■■■■□ 3.19
CHCHD4-202ENST00000396914 PDE4BQ07343 736 aa34.96■■■■□ 3.19
CHCHD4-202ENST00000396914 MS4A4AQ96JQ5 239 aa34.96■■■■□ 3.19
CHCHD4-202ENST00000396914 WBP1LQ9NX94 342 aa34.96■■■■□ 3.19
CHCHD4-202ENST00000396914 ROBO3Q96MS0 1386 aa34.95■■■■□ 3.19
CHCHD4-202ENST00000396914 SGSM2O43147 1006 aa34.95■■■■□ 3.19
CHCHD4-202ENST00000396914 CDC45O75419 566 aa34.95■■■■□ 3.19
CHCHD4-202ENST00000396914 TM4SF4P48230 202 aa34.95■■■■□ 3.19
CHCHD4-202ENST00000396914 SPP2Q13103 211 aa34.95■■■■□ 3.19
CHCHD4-202ENST00000396914 DSCC1Q9BVC3 393 aa34.95■■■■□ 3.19
CHCHD4-202ENST00000396914 TBC1D2Q9BYX2 928 aa34.95■■■■□ 3.19
CHCHD4-202ENST00000396914 PCNTO95613 3336 aa34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 PRDM1O75626 825 aa34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 HSPA1AP0DMV8 641 aaKnown RBP34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 HSPA1BP0DMV9 641 aaKnown RBP34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 AKR1B1P15121 316 aa34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 HAND2P61296 217 aa34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 ZNF444Q8N0Y2 327 aaPredicted RBP34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 ZNF280CQ8ND82 737 aa34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 CCDC17Q96LX7 622 aa34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 KCNH4Q9UQ05 1017 aa34.94■■■■□ 3.18
CHCHD4-202ENST00000396914 CXCL11O14625 94 aa34.93■■■■□ 3.18
CHCHD4-202ENST00000396914 OTUD7BQ6GQQ9 843 aa34.93■■■■□ 3.18
CHCHD4-202ENST00000396914 KIAA1211Q6ZU35 1233 aa34.93■■■■□ 3.18
CHCHD4-202ENST00000396914 BRI3BPQ8WY22 251 aa34.93■■■■□ 3.18
CHCHD4-202ENST00000396914 CTNNA3Q9UI47 895 aa34.92■■■■□ 3.18
CHCHD4-202ENST00000396914 ZMYM6O95789 1325 aa34.92■■■■□ 3.18
CHCHD4-202ENST00000396914 SEPT2Q15019 361 aa34.91■■■■□ 3.18
CHCHD4-202ENST00000396914 GADL1Q6ZQY3 521 aa34.91■■■■□ 3.18
CHCHD4-202ENST00000396914 TMEM179Q6ZVK1 233 aa34.91■■■■□ 3.18
CHCHD4-202ENST00000396914 IFNL1Q8IU54 200 aa34.91■■■■□ 3.18
CHCHD4-202ENST00000396914 ESYT1Q9BSJ8 1104 aa34.91■■■■□ 3.18
CHCHD4-202ENST00000396914 TOMM22Q9NS69 142 aa34.91■■■■□ 3.18
CHCHD4-202ENST00000396914 PHIPQ8WWQ0 1821 aa34.91■■■■□ 3.18
CHCHD4-202ENST00000396914 ZNF213O14771 459 aa34.9■■■■□ 3.18
CHCHD4-202ENST00000396914 TRPA1O75762 1119 aa34.9■■■■□ 3.18
CHCHD4-202ENST00000396914 RASA1P20936 1047 aa34.89■■■■□ 3.18
CHCHD4-202ENST00000396914 FEZ1Q99689 392 aa34.89■■■■□ 3.18
CHCHD4-202ENST00000396914 WDR18Q9BV38 432 aa34.89■■■■□ 3.18
CHCHD4-202ENST00000396914 RNF186Q9NXI6 227 aa34.89■■■■□ 3.18
CHCHD4-202ENST00000396914 ANAPC4Q9UJX5 808 aa34.89■■■■□ 3.18
CHCHD4-202ENST00000396914 TESPA1A2RU30 521 aaPredicted RBP34.89■■■■□ 3.18
CHCHD4-202ENST00000396914 IGF2BP3O00425 579 aaKnown RBP eCLIP34.89■■■■□ 3.18
CHCHD4-202ENST00000396914 PTPN18Q99952 460 aa34.89■■■■□ 3.18
CHCHD4-202ENST00000396914 A0A0G2JLL6 359 aaPredicted RBP34.88■■■■□ 3.17
CHCHD4-202ENST00000396914 PTH1RQ03431 593 aa34.88■■■■□ 3.17
CHCHD4-202ENST00000396914 MTMR2Q13614 643 aa34.88■■■■□ 3.17
CHCHD4-202ENST00000396914 IMMTQ16891 758 aaKnown RBP34.88■■■■□ 3.17
CHCHD4-202ENST00000396914 FASTKD5Q7L8L6 764 aaKnown RBP34.88■■■■□ 3.17
CHCHD4-202ENST00000396914 PRRT2Q7Z6L0 340 aaPredicted RBP34.88■■■■□ 3.17
CHCHD4-202ENST00000396914 INCENPQ9NQS7 918 aa34.88■■■■□ 3.17
CHCHD4-202ENST00000396914 TSKSQ9UJT2 592 aa34.88■■■■□ 3.17
CHCHD4-202ENST00000396914 USP17L10C9JJH3 530 aa34.87■■■■□ 3.17
CHCHD4-202ENST00000396914 CA12O43570 354 aa34.87■■■■□ 3.17
CHCHD4-202ENST00000396914 GUCY1A2P33402 732 aa34.87■■■■□ 3.17
CHCHD4-202ENST00000396914 HMGCS2P54868 508 aa34.87■■■■□ 3.17
CHCHD4-202ENST00000396914 RRP12Q5JTH9 1297 aaKnown RBP34.87■■■■□ 3.17
CHCHD4-202ENST00000396914 ALDH1A1P00352 501 aa34.86■■■■□ 3.17
CHCHD4-202ENST00000396914 ATP2B2Q01814 1243 aa34.86■■■■□ 3.17
CHCHD4-202ENST00000396914 ZYXQ15942 572 aaKnown RBP34.86■■■■□ 3.17
CHCHD4-202ENST00000396914 TSPY3P0CV98 308 aa34.85■■■■□ 3.17
CHCHD4-202ENST00000396914 TSPY8P0CW00 308 aa34.85■■■■□ 3.17
CHCHD4-202ENST00000396914 ANO2Q9NQ90 1003 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms