RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 PPP1R9BQ96SB3 815 aa4.41□□□□□ -1.7
CCDC110-202ENST00000393540 ZSCAN10Q96SZ4 725 aaPredicted RBP4.41□□□□□ -1.7
CCDC110-202ENST00000393540 MAP3K14Q99558 947 aa4.41□□□□□ -1.7
CCDC110-202ENST00000393540 RTEL1Q9NZ71 1219 aa4.41□□□□□ -1.7
CCDC110-202ENST00000393540 KIF13BQ9NQT8 1826 aa4.41□□□□□ -1.7
CCDC110-202ENST00000393540 COL4A5P29400 1685 aa4.41□□□□□ -1.7
CCDC110-202ENST00000393540 STK36Q9NRP7 1315 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 PSME4Q14997 1843 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 GOLGA8AA7E2F4 631 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 H3BQV1 296 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 PLEKHA8P1O95397 391 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 NPR1P16066 1061 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 U2AF2P26368 475 aaKnown RBP eCLIP4.4□□□□□ -1.7
CCDC110-202ENST00000393540 NASPP49321 788 aaPredicted RBP4.4□□□□□ -1.7
CCDC110-202ENST00000393540 TOB1P50616 345 aaPredicted RBP4.4□□□□□ -1.7
CCDC110-202ENST00000393540 CEBPZQ03701 1054 aaKnown RBP4.4□□□□□ -1.7
CCDC110-202ENST00000393540 PTPAQ15257 358 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 SLC4A8Q2Y0W8 1093 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 AXDND1Q5T1B0 1012 aaPredicted RBP4.4□□□□□ -1.7
CCDC110-202ENST00000393540 KRT40Q6A162 431 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 ZNF654Q8IZM8 581 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 FAM184AQ8NB25 1140 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 FANCBQ8NB91 859 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 LINC00301Q8NCQ3 95 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 SLC44A5Q8NCS7 719 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 PDLIM2Q96JY6 352 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 C8orf76Q96K31 380 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 ALG1Q9BT22 464 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 ATP8A2Q9NTI2 1148 aa4.4□□□□□ -1.7
CCDC110-202ENST00000393540 WNT7AO00755 349 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 RIMBP2O15034 1052 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 NPHP1O15259 732 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 WDHD1O75717 1129 aaPredicted RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 POLR3DP05423 398 aaPredicted RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 BTDP43251 543 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 RCAN1P53805 252 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 WTAPQ15007 396 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 NOM1Q5C9Z4 860 aaKnown RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 EARS2Q5JPH6 523 aaKnown RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 MYSM1Q5VVJ2 828 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 SPTY2D1Q68D10 685 aaPredicted RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 TMED8Q6PL24 325 aaPredicted RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 SRBD1Q8N5C6 995 aaKnown RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 OXER1Q8TDS5 423 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 ANKS1AQ92625 1134 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 CRNKL1Q9BZJ0 848 aaKnown RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 SCAND2PQ9GZW5 306 aaPredicted RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 RNF41Q9H4P4 317 aaPredicted RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 RRAGDQ9NQL2 400 aaPredicted RBP4.4□□□□□ -1.71
CCDC110-202ENST00000393540 PCDHA7Q9UN72 937 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 PCDHAC2Q9Y5I4 1007 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 SLC12A7Q9Y666 1083 aa4.4□□□□□ -1.71
CCDC110-202ENST00000393540 hCG_1642624A0A1W2PR95 340 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 POLD1P28340 1107 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 CHRNA5P30532 468 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 DOK7Q18PE1 504 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 NFXL1Q6ZNB6 911 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 RASGRP2Q7LDG7 609 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 DZIP1Q86YF9 867 aaKnown RBP4.39□□□□□ -1.71
CCDC110-202ENST00000393540 MAPKAPK5Q8IW41 473 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 TGFBRAP1Q8WUH2 860 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 ESR2Q92731 530 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 TNFRSF25Q93038 417 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 MASTLQ96GX5 879 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 SLC26A6Q9BXS9 759 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 TSPY26PQ9H489 355 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 CLSTN2Q9H4D0 955 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 DDX4Q9NQI0 724 aaKnown RBP4.39□□□□□ -1.71
CCDC110-202ENST00000393540 MCM9Q9NXL9 1143 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 DACT1Q9NYF0 836 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.39□□□□□ -1.71
CCDC110-202ENST00000393540 SAP30BPQ9UHR5 308 aaKnown RBP4.39□□□□□ -1.71
CCDC110-202ENST00000393540 KCNJ14Q9UNX9 436 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 DAGLAQ9Y4D2 1042 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 MRVI1Q9Y6F6 885 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 SZT2Q5T011 3432 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 USP17L3A6NCW0 530 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 USP17L4A6NCW7 530 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 FAM205CA6NFA0 338 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 CCDC69A6NI79 296 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 DHX16O60231 1041 aaKnown RBP4.39□□□□□ -1.71
CCDC110-202ENST00000393540 IGSF3O75054 1194 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 SLURP2P0DP57 97 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 RASA1P20936 1047 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 KCNA3P22001 575 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 IARSP41252 1262 aaKnown RBP4.39□□□□□ -1.71
CCDC110-202ENST00000393540 NOVP48745 357 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 GTF2IP78347 998 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 CAMK4Q16566 473 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 RTN1Q16799 776 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 KRTAP21-3Q3LHN1 58 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 MFSD14BQ5SR56 506 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 ATL3Q6DD88 541 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 USP17L1Q7RTZ2 530 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 TMC4Q7Z404 712 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 FMR1NBQ8N0W7 255 aaPredicted RBP4.39□□□□□ -1.71
CCDC110-202ENST00000393540 RNF214Q8ND24 703 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 FLAD1Q8NFF5 587 aa4.39□□□□□ -1.71
CCDC110-202ENST00000393540 COA1Q9GZY4 146 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms