RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 MAST3O60307 1309 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 GDF11O95390 407 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 SERPINB2P05120 415 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 MCM6Q14566 821 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 PPP1R9BQ96SB3 815 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 SMIM23A6NLE4 172 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 ZNF526Q8TF50 670 aaPredicted RBP16.42■□□□□ 0.22
PSME4-201ENST00000389993 ZSWIM6Q9HCJ5 1215 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 PIH1D3Q9NQM4 214 aaKnown RBP16.42■□□□□ 0.22
PSME4-201ENST00000389993 HEG1Q9ULI3 1381 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 RAD17O75943 681 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 TBC1D5Q92609 795 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 IGKV5-2P06315 115 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 PAGR1Q9BTK6 254 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 ARHGEF10LQ9HCE6 1279 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 EEF2P13639 858 aaKnown RBP16.41■□□□□ 0.22
PSME4-201ENST00000389993 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 NOC4LQ9BVI4 516 aaKnown RBP16.41■□□□□ 0.22
PSME4-201ENST00000389993 CLSTN2Q9H4D0 955 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 ZKSCAN5Q9Y2L8 839 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 ADCY7P51828 1080 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 GOLGA8FQ08AF8 430 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 GOLGA8DPQ0D2H9 430 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 CALCRLQ16602 461 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 PYM1Q9BRP8 204 aaKnown RBP16.41■□□□□ 0.22
PSME4-201ENST00000389993 PDIA3P30101 505 aaKnown RBP16.41■□□□□ 0.22
PSME4-201ENST00000389993 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
PSME4-201ENST00000389993 NEK11Q8NG66 645 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 ATG3Q9NT62 314 aa16.41■□□□□ 0.22
PSME4-201ENST00000389993 CWC15Q9P013 229 aaKnown RBP16.41■□□□□ 0.22
PSME4-201ENST00000389993 KRT5P13647 590 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 GBP2P32456 591 aaPredicted RBP16.4■□□□□ 0.22
PSME4-201ENST00000389993 CTAGE1Q96RT6 745 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 NF2P35240 595 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 RILPL1Q5EBL4 403 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 MYL5Q02045 173 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 MIGA2Q7L4E1 593 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 MTMR6Q9Y217 621 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 NEMFO60524 1076 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 TPH2Q8IWU9 490 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 LRRC27Q9C0I9 530 aa16.4■□□□□ 0.22
PSME4-201ENST00000389993 DESP17661 470 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
PSME4-201ENST00000389993 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
PSME4-201ENST00000389993 CDK12Q9NYV4 1490 aaPredicted RBP16.39■□□□□ 0.21
PSME4-201ENST00000389993 MADDQ8WXG6 1647 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 CDC25AP30304 524 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 GTF2F1P35269 517 aaKnown RBP eCLIP16.39■□□□□ 0.215e-160■■■■■ 227.4
PSME4-201ENST00000389993 GRAMD1CQ8IYS0 662 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 LRMPQ12912 555 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 DNAJC21Q5F1R6 531 aaKnown RBP16.39■□□□□ 0.21
PSME4-201ENST00000389993 TSC1Q92574 1164 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 CDC42BPGQ6DT37 1551 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 BRD1O95696 1058 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 FANCCQ00597 558 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 ZNF354CQ86Y25 554 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 IGSF22Q8N9C0 903 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 CCDC42Q96M95 316 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 THRAP3Q9Y2W1 955 aaKnown RBP16.39■□□□□ 0.21
PSME4-201ENST00000389993 SPATA31A3Q5VYP0 1347 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 SYNRGQ9UMZ2 1314 aa16.39■□□□□ 0.21
PSME4-201ENST00000389993 ATP2C2O75185 946 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 POSTNQ15063 836 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 LLPHQ9BRT6 129 aaKnown RBP16.38■□□□□ 0.21
PSME4-201ENST00000389993 TMOD4Q9NZQ9 345 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 LRWD1Q9UFC0 647 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 KIF2AO00139 706 aaPredicted RBP16.38■□□□□ 0.21
PSME4-201ENST00000389993 KIAA0754O94854 1291 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 PFKFB1P16118 471 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 ADKP55263 362 aaKnown RBP16.38■□□□□ 0.21
PSME4-201ENST00000389993 NDUFA8P51970 172 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 CABP7Q86V35 215 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 FANCBQ8NB91 859 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 HINFPQ9BQA5 517 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 MTX1Q13505 466 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 CTR9Q6PD62 1173 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 CCDC50Q8IVM0 306 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 KRT9P35527 623 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 CYLC1P35663 651 aaPredicted RBP16.38■□□□□ 0.21
PSME4-201ENST00000389993 PDE6BP35913 854 aa16.38■□□□□ 0.21
PSME4-201ENST00000389993 CPVLQ9H3G5 476 aa16.37■□□□□ 0.21
PSME4-201ENST00000389993 USP17L3A6NCW0 530 aa16.37■□□□□ 0.21
PSME4-201ENST00000389993 USP17L4A6NCW7 530 aa16.37■□□□□ 0.21
PSME4-201ENST00000389993 PRR16Q569H4 304 aa16.37■□□□□ 0.21
PSME4-201ENST00000389993 USP17L1Q7RTZ2 530 aa16.37■□□□□ 0.21
PSME4-201ENST00000389993 KRT27Q7Z3Y8 459 aa16.37■□□□□ 0.21
PSME4-201ENST00000389993 CSGALNACT2Q8N6G5 542 aa16.37■□□□□ 0.21
PSME4-201ENST00000389993 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
PSME4-201ENST00000389993 NONOQ15233 471 aaKnown RBP eCLIP16.37■□□□□ 0.21
PSME4-201ENST00000389993 SMYD4Q8IYR2 804 aaPredicted RBP16.37■□□□□ 0.21
PSME4-201ENST00000389993 IFT81Q8WYA0 676 aa16.37■□□□□ 0.21
PSME4-201ENST00000389993 FAM196BA6NMK8 535 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms