RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 CCDC63Q8NA47 563 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 PROCA1Q8NCQ7 364 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 ERMNQ8TAM6 284 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 ZSWIM6Q9HCJ5 1215 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 USTQ9Y2C2 406 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 PCDHB13Q9Y5F0 798 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 ADAMTS12P58397 1594 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 MAST1Q9Y2H9 1570 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 PDIA3P30101 505 aaKnown RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 GTF2A1P52655 376 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 GYS2P54840 703 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 KRT83P78385 493 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 SPAG1Q07617 926 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 HS1BP3Q53T59 392 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 RILPL1Q5EBL4 403 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 ZNF654Q8IZM8 581 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 CACTINQ8WUQ7 758 aaKnown RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 MYO1AQ9UBC5 1043 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 CCNL1Q9UK58 526 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 RTL9Q8NET4 1388 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 IBTKQ9P2D0 1353 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 POTEB2H3BUK9 544 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 ARID4AP29374 1257 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 CA8P35219 290 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 MXRA7P84157 204 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 PPP1R7Q15435 360 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 CNBD1Q8NA66 436 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 MARCH10Q8NA82 808 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 ERO1AQ96HE7 468 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 NAPGQ99747 312 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 SLC39A2Q9NP94 309 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.59□□□□□ -1.51
LTN1-202ENST00000389194 ZNF521Q96K83 1311 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 BUB1BO60566 1050 aaPredicted RBP5.59□□□□□ -1.51
LTN1-202ENST00000389194 ATP5JP18859 108 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 CXCR5P32302 372 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 OTUD6BQ8N6M0 293 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 TAOK3Q9H2K8 898 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 COMMD10Q9Y6G5 202 aa5.59□□□□□ -1.51
LTN1-202ENST00000389194 CEP104O60308 925 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 VIMP08670 466 aaKnown RBP5.59□□□□□ -1.52
LTN1-202ENST00000389194 PDE6AP16499 860 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 GTF2IP78347 998 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 BIRC3Q13489 604 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 CNGA4Q8IV77 575 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 LRRC8AQ8IWT6 810 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 IFNL3Q8IZI9 196 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 PUS7LQ9H0K6 701 aaKnown RBP5.59□□□□□ -1.52
LTN1-202ENST00000389194 CPVLQ9H3G5 476 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 ATP6V0A2Q9Y487 856 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 GNAT2P19087 354 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 GNAQP50148 359 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 CFAP58Q5T655 872 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 SND1Q7KZF4 910 aaKnown RBP eCLIP5.59□□□□□ -1.52
LTN1-202ENST00000389194 CCDC91Q7Z6B0 441 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 SPICE1Q8N0Z3 855 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 EHBP1Q8NDI1 1231 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 FBF1Q8TES7 1133 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 SELENOOQ9BVL4 669 aa5.59□□□□□ -1.52
LTN1-202ENST00000389194 ATP1A3P13637 1013 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 GNA11P29992 359 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 CYP4A11Q02928 519 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 PPARAQ07869 468 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 EPC1Q9H2F5 836 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 ADCY1Q08828 1119 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 CCDC6Q16204 474 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 EPHA10Q5JZY3 1008 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 IKBKGQ9Y6K9 419 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 EBAG9O00559 213 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 GCNT3O95395 438 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 VAV2P52735 878 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 NKX1-1Q15270 411 aaPredicted RBP5.58□□□□□ -1.52
LTN1-202ENST00000389194 LRRC41Q15345 812 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 TRAPPC3LQ5T215 181 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 KCTD16Q68DU8 428 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 CCDC155Q8N6L0 562 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 LPIN2Q92539 896 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 LRWD1Q9UFC0 647 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 PCDHA5Q9Y5H7 936 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 INSRP06213 1382 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 EIF4G3O43432 1585 aaKnown RBP5.58□□□□□ -1.52
LTN1-202ENST00000389194 KDM5AP29375 1690 aaKnown RBP5.58□□□□□ -1.52
LTN1-202ENST00000389194 YEATS2Q9ULM3 1422 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 CUTAO60888 179 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 KIF4AO95239 1232 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 PHKG2P15735 406 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 NF2P35240 595 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 ZBTB16Q05516 673 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 C8orf74Q6P047 294 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 HS2ST1Q7LGA3 356 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 HDXQ7Z353 690 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 FAM76AQ8TAV0 307 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 TMEM87BQ96K49 555 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 ZNF408Q9H9D4 720 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 TNKSO95271 1327 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 CTSWP56202 376 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 SNAP25P60880 206 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 PTGDRQ13258 359 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 PHLDB2Q86SQ0 1253 aa5.58□□□□□ -1.52
LTN1-202ENST00000389194 KIAA0825Q8IV33 1275 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms