RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 CXCL9Q07325 125 aa17.29■□□□□ 0.36
POLR1E-202ENST00000377798 CPLX2Q6PUV4 134 aaKnown RBP17.29■□□□□ 0.36
POLR1E-202ENST00000377798 AGBL3Q8NEM8 1001 aa17.29■□□□□ 0.36
POLR1E-202ENST00000377798 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
POLR1E-202ENST00000377798 TSPY3P0CV98 308 aa17.28■□□□□ 0.36
POLR1E-202ENST00000377798 TSPY8P0CW00 308 aa17.28■□□□□ 0.36
POLR1E-202ENST00000377798 FDPSP14324 419 aaKnown RBP17.28■□□□□ 0.36
POLR1E-202ENST00000377798 CDC37L1Q7L3B6 337 aa17.28■□□□□ 0.36
POLR1E-202ENST00000377798 CCDC144CPQ8IYA2 1237 aa17.28■□□□□ 0.36
POLR1E-202ENST00000377798 FAM217BQ9NTX9 383 aaPredicted RBP17.28■□□□□ 0.36
POLR1E-202ENST00000377798 ZBTB12Q9Y330 459 aaPredicted RBP17.28■□□□□ 0.36
POLR1E-202ENST00000377798 NMT2O60551 498 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 PTMSP20962 102 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 GABPAQ06546 454 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 RTN1Q16799 776 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 CCDC178Q5BJE1 867 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 MCTP1Q6DN14 999 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 CIAPIN1Q6FI81 312 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 OGFOD1Q8N543 542 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 TCP11L1Q9NUJ3 509 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
POLR1E-202ENST00000377798 PPFIA3O75145 1194 aa17.27■□□□□ 0.35
POLR1E-202ENST00000377798 HLA-DOAP06340 250 aa17.27■□□□□ 0.35
POLR1E-202ENST00000377798 RASSF7Q02833 373 aa17.27■□□□□ 0.35
POLR1E-202ENST00000377798 PPP2R5BQ15173 497 aa17.27■□□□□ 0.35
POLR1E-202ENST00000377798 NTRK3Q16288 839 aa17.27■□□□□ 0.35
POLR1E-202ENST00000377798 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.35
POLR1E-202ENST00000377798 PRMT6Q96LA8 375 aaPredicted RBP17.27■□□□□ 0.35
POLR1E-202ENST00000377798 ORC3Q9UBD5 711 aaPredicted RBP17.27■□□□□ 0.35
POLR1E-202ENST00000377798 FAM198AQ9UFP1 575 aa17.27■□□□□ 0.35
POLR1E-202ENST00000377798 SERPINB13Q9UIV8 391 aa17.27■□□□□ 0.35
POLR1E-202ENST00000377798 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 H3BQV1 296 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 DDAH1O94760 285 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 CACNB3P54284 484 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 IFFO2Q5TF58 517 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 RCSD1Q6JBY9 416 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 DGKHQ86XP1 1220 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 NUP133Q8WUM0 1156 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 DHX36Q9H2U1 1008 aaKnown RBP17.26■□□□□ 0.35
POLR1E-202ENST00000377798 TDRD3Q9H7E2 651 aaKnown RBP17.26■□□□□ 0.35
POLR1E-202ENST00000377798 IL17RBQ9NRM6 502 aa17.26■□□□□ 0.35
POLR1E-202ENST00000377798 SIPA1L1O43166 1804 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 CALM1P0DP23 149 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 CALM2P0DP24 149 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 CALM3P0DP25 149 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 TROAPQ12815 778 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 ANKS1AQ92625 1134 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 EHD4Q9H223 541 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 SWAP70Q9UH65 585 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 TCHHQ07283 1943 aa17.25■□□□□ 0.35
POLR1E-202ENST00000377798 IFNAR1P17181 557 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 TNIP1Q15025 636 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 DLGAP5Q15398 846 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 NEDD1Q8NHV4 660 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 FHDC1Q9C0D6 1143 aaPredicted RBP17.24■□□□□ 0.35
POLR1E-202ENST00000377798 STK36Q9NRP7 1315 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 COL2A1P02458 1487 aaPredicted RBP17.24■□□□□ 0.35
POLR1E-202ENST00000377798 PLIN4Q96Q06 1357 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 TCP10Q12799 353 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 FOXD4L6Q3SYB3 417 aaPredicted RBP17.24■□□□□ 0.35
POLR1E-202ENST00000377798 FOXD4L3Q6VB84 417 aaPredicted RBP17.24■□□□□ 0.35
POLR1E-202ENST00000377798 ZFPM1Q8IX07 1006 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 MTMR14Q8NCE2 650 aa17.24■□□□□ 0.35
POLR1E-202ENST00000377798 ENTPD3O75355 529 aa17.23■□□□□ 0.35
POLR1E-202ENST00000377798 PRELPP51888 382 aa17.23■□□□□ 0.35
POLR1E-202ENST00000377798 FERMT3Q86UX7 667 aa17.23■□□□□ 0.35
POLR1E-202ENST00000377798 PHKBQ93100 1093 aa17.23■□□□□ 0.35
POLR1E-202ENST00000377798 RBM28Q9NW13 759 aaKnown RBP17.23■□□□□ 0.35
POLR1E-202ENST00000377798 TMOD2Q9NZR1 351 aa17.23■□□□□ 0.35
POLR1E-202ENST00000377798 ATRNL1Q5VV63 1379 aa17.23■□□□□ 0.35
POLR1E-202ENST00000377798 FMNL1O95466 1100 aaPredicted RBP17.22■□□□□ 0.35
POLR1E-202ENST00000377798 KAT14Q9H8E8 782 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 SRCAPQ6ZRS2 3230 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
POLR1E-202ENST00000377798 FZD9O00144 591 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 RPS12P25398 132 aaKnown RBP17.22■□□□□ 0.35
POLR1E-202ENST00000377798 MMP14P50281 582 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 FOSBP53539 338 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 SSRP1Q08945 709 aaKnown RBP17.22■□□□□ 0.35
POLR1E-202ENST00000377798 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 PI4KBQ9UBF8 816 aa17.22■□□□□ 0.35
POLR1E-202ENST00000377798 TRAK2O60296 914 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 SHMT1P34896 483 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 EIF6P56537 245 aaKnown RBP17.21■□□□□ 0.35
POLR1E-202ENST00000377798 RESTQ13127 1097 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 SH3BP5LQ7L8J4 393 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
POLR1E-202ENST00000377798 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 PNMA1Q8ND90 353 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 SLC26A6Q9BXS9 759 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 ZSCAN16Q9H4T2 348 aaPredicted RBP17.21■□□□□ 0.35
POLR1E-202ENST00000377798 LMBRD1Q9NUN5 540 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 STX8Q9UNK0 236 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms