RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
NELFE-201ENST00000375425 RIOK1Q9BRS2 568 aaKnown RBP17.29■□□□□ 0.36
NELFE-201ENST00000375425 ASCC2Q9H1I8 757 aaPredicted RBP17.29■□□□□ 0.36
NELFE-201ENST00000375425 MAGEB6P1A0A0J9YX57 407 aa17.28■□□□□ 0.36
NELFE-201ENST00000375425 C19orf81C9J6K1 198 aa17.28■□□□□ 0.36
NELFE-201ENST00000375425 USP17L10C9JJH3 530 aa17.28■□□□□ 0.36
NELFE-201ENST00000375425 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
NELFE-201ENST00000375425 FAM110CQ1W6H9 321 aa17.28■□□□□ 0.36
NELFE-201ENST00000375425 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
NELFE-201ENST00000375425 SERPINB13Q9UIV8 391 aa17.28■□□□□ 0.36
NELFE-201ENST00000375425 ZBTB21Q9ULJ3 1066 aa17.28■□□□□ 0.36
NELFE-201ENST00000375425 MAST2Q6P0Q8 1798 aa17.28■□□□□ 0.36
NELFE-201ENST00000375425 PTPRFP10586 1907 aa17.27■□□□□ 0.36
NELFE-201ENST00000375425 ADCY3O60266 1144 aa17.27■□□□□ 0.35
NELFE-201ENST00000375425 PDE6AP16499 860 aa17.27■□□□□ 0.35
NELFE-201ENST00000375425 UBXN2AP68543 259 aa17.27■□□□□ 0.35
NELFE-201ENST00000375425 TATDN1Q6P1N9 297 aa17.27■□□□□ 0.35
NELFE-201ENST00000375425 TTC6Q86TZ1 520 aa17.27■□□□□ 0.35
NELFE-201ENST00000375425 SLAIN1Q8ND83 568 aa17.27■□□□□ 0.35
NELFE-201ENST00000375425 EDC3Q96F86 508 aaKnown RBP17.27■□□□□ 0.35
NELFE-201ENST00000375425 BOLA2Q9H3K6 86 aa17.27■□□□□ 0.35
NELFE-201ENST00000375425 SLC34A2O95436 690 aa17.26■□□□□ 0.35
NELFE-201ENST00000375425 GH2P01242 217 aa17.26■□□□□ 0.35
NELFE-201ENST00000375425 CCL5P13501 91 aa17.26■□□□□ 0.35
NELFE-201ENST00000375425 HOXA7P31268 230 aaPredicted RBP17.26■□□□□ 0.35
NELFE-201ENST00000375425 PLCD1P51178 756 aa17.26■□□□□ 0.35
NELFE-201ENST00000375425 COA7Q96BR5 231 aa17.26■□□□□ 0.35
NELFE-201ENST00000375425 RNF208Q9H0X6 261 aa17.26■□□□□ 0.35
NELFE-201ENST00000375425 EHD4Q9H223 541 aa17.26■□□□□ 0.35
NELFE-201ENST00000375425 ZNF532Q9HCE3 1301 aa17.25■□□□□ 0.35
NELFE-201ENST00000375425 SIPA1L1O43166 1804 aa17.25■□□□□ 0.35
NELFE-201ENST00000375425 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
NELFE-201ENST00000375425 CERKLQ49MI3 558 aaPredicted RBP17.25■□□□□ 0.35
NELFE-201ENST00000375425 PXYLP1Q8TE99 480 aa17.25■□□□□ 0.35
NELFE-201ENST00000375425 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
NELFE-201ENST00000375425 EMILIN3Q9NT22 766 aa17.25■□□□□ 0.35
NELFE-201ENST00000375425 RBBP6Q7Z6E9 1792 aaKnown RBP17.24■□□□□ 0.35
NELFE-201ENST00000375425 TCRBV5S4A2TA0A5A2 114 aa17.24■□□□□ 0.35
NELFE-201ENST00000375425 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
NELFE-201ENST00000375425 GJB1P08034 283 aa17.24■□□□□ 0.35
NELFE-201ENST00000375425 ELNP15502 786 aa17.24■□□□□ 0.35
NELFE-201ENST00000375425 ATP5JP18859 108 aa17.24■□□□□ 0.35
NELFE-201ENST00000375425 IRF5Q13568 498 aa17.24■□□□□ 0.35
NELFE-201ENST00000375425 NKX2-3Q8TAU0 364 aa17.24■□□□□ 0.35
NELFE-201ENST00000375425 CRNKL1Q9BZJ0 848 aaKnown RBP17.24■□□□□ 0.35
NELFE-201ENST00000375425 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
NELFE-201ENST00000375425 TAOK2Q9UL54 1235 aa17.24■□□□□ 0.35
NELFE-201ENST00000375425 GJA8P48165 433 aa17.23■□□□□ 0.35
NELFE-201ENST00000375425 RAB3GAP1Q15042 981 aa17.23■□□□□ 0.35
NELFE-201ENST00000375425 SHISA4Q96DD7 197 aa17.23■□□□□ 0.35
NELFE-201ENST00000375425 LRRCC1Q9C099 1032 aa17.23■□□□□ 0.35
NELFE-201ENST00000375425 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
NELFE-201ENST00000375425 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 PEX10O60683 326 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 HERVK_113P62684 666 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 ABCB5Q2M3G0 1257 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 SLFNL1Q499Z3 407 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 LCORLQ8N3X6 602 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 SDR42E1Q8WUS8 393 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 HAUS7Q99871 368 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 UNC93B1Q9H1C4 597 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 MORF4L1Q9UBU8 362 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 FOCADQ5VW36 1801 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 ATAD5Q96QE3 1844 aa17.22■□□□□ 0.35
NELFE-201ENST00000375425 SMARCA5O60264 1052 aaPredicted RBP17.21■□□□□ 0.35
NELFE-201ENST00000375425 INHAP05111 366 aa17.21■□□□□ 0.35
NELFE-201ENST00000375425 SHMT1P34896 483 aa17.21■□□□□ 0.35
NELFE-201ENST00000375425 EVX2Q03828 476 aa17.21■□□□□ 0.35
NELFE-201ENST00000375425 ZYXQ15942 572 aaKnown RBP17.21■□□□□ 0.35
NELFE-201ENST00000375425 TXNRD2Q9NNW7 524 aa17.21■□□□□ 0.35
NELFE-201ENST00000375425 CABP5Q9NP86 173 aa17.21■□□□□ 0.35
NELFE-201ENST00000375425 RBPJLQ9UBG7 517 aa17.21■□□□□ 0.35
NELFE-201ENST00000375425 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
NELFE-201ENST00000375425 ADD2P35612 726 aa17.21■□□□□ 0.34
NELFE-201ENST00000375425 GABPAQ06546 454 aa17.21■□□□□ 0.34
NELFE-201ENST00000375425 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.34
NELFE-201ENST00000375425 FEZ1Q99689 392 aa17.21■□□□□ 0.34
NELFE-201ENST00000375425 ARMT1Q9H993 441 aa17.21■□□□□ 0.34
NELFE-201ENST00000375425 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.34
NELFE-201ENST00000375425 LOC285556D6RIA3 1793 aa17.21■□□□□ 0.34
NELFE-201ENST00000375425 MGAMO43451 1857 aa17.2■□□□□ 0.34
NELFE-201ENST00000375425 SGPL1O95470 568 aa17.2■□□□□ 0.34
NELFE-201ENST00000375425 Q3C1V9 767 aa17.2■□□□□ 0.34
NELFE-201ENST00000375425 ACER1Q8TDN7 264 aa17.2■□□□□ 0.34
NELFE-201ENST00000375425 U2AF1L4Q8WU68 220 aaKnown RBP17.2■□□□□ 0.34
NELFE-201ENST00000375425 GCC1Q96CN9 775 aa17.2■□□□□ 0.34
NELFE-201ENST00000375425 C12orf42Q96LP6 360 aa17.2■□□□□ 0.34
NELFE-201ENST00000375425 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.2■□□□□ 0.347e-9■■■■□ 20.6
NELFE-201ENST00000375425 PRKAB2O43741 272 aa17.19■□□□□ 0.34
NELFE-201ENST00000375425 CHGBP05060 677 aa17.19■□□□□ 0.34
NELFE-201ENST00000375425 GUCY1A2P33402 732 aa17.19■□□□□ 0.34
NELFE-201ENST00000375425 USP14P54578 494 aa17.19■□□□□ 0.34
NELFE-201ENST00000375425 KIAA1683Q9H0B3 1180 aa17.19■□□□□ 0.34
NELFE-201ENST00000375425 MYH1P12882 1939 aa17.19■□□□□ 0.34
NELFE-201ENST00000375425 USP17L15C9J2P7 530 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 USP17L13C9JLJ4 530 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 USP17L11C9JVI0 530 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 USP17L18D6R9N7 530 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 USP17L22D6RA61 530 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms