RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ADD1P35611 737 aaKnown RBP30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 CIAPIN1Q6FI81 312 aa30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 CATIPQ7Z7H3 387 aa30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 MYL10Q9BUA6 226 aa30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 TCP11L1Q9NUJ3 509 aa30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 PCDHAC2Q9Y5I4 1007 aa30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 HLA-DOAP06340 250 aa30.71■■■□□ 2.51
ATPAF1-202ENST00000371937 RXRAP19793 462 aa30.71■■■□□ 2.51
ATPAF1-202ENST00000371937 RASA1P20936 1047 aa30.71■■■□□ 2.51
ATPAF1-202ENST00000371937 TNIP1Q15025 636 aa30.71■■■□□ 2.51
ATPAF1-202ENST00000371937 SLC44A5Q8NCS7 719 aa30.71■■■□□ 2.51
ATPAF1-202ENST00000371937 DHX36Q9H2U1 1008 aaKnown RBP30.71■■■□□ 2.51
ATPAF1-202ENST00000371937 NFIAQ12857 509 aa30.7■■■□□ 2.51
ATPAF1-202ENST00000371937 H3BQV1 296 aa30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 CALM1P0DP23 149 aa30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 CALM2P0DP24 149 aa30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 CALM3P0DP25 149 aa30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 CDC27P30260 824 aa30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 RTN1Q16799 776 aa30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 IFFO2Q5TF58 517 aa30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 DGKHQ86XP1 1220 aa30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 ZBTB12Q9Y330 459 aaPredicted RBP30.7■■■□□ 2.5
ATPAF1-202ENST00000371937 CCDC144CPQ8IYA2 1237 aa30.69■■■□□ 2.5
ATPAF1-202ENST00000371937 FANCBQ8NB91 859 aa30.69■■■□□ 2.5
ATPAF1-202ENST00000371937 FAM217BQ9NTX9 383 aaPredicted RBP30.69■■■□□ 2.5
ATPAF1-202ENST00000371937 SWAP70Q9UH65 585 aa30.69■■■□□ 2.5
ATPAF1-202ENST00000371937 SERPINB13Q9UIV8 391 aa30.69■■■□□ 2.5
ATPAF1-202ENST00000371937 MMP14P50281 582 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 GABPAQ06546 454 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 MCTP1Q6DN14 999 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 PRMT6Q96LA8 375 aaPredicted RBP30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 ORC3Q9UBD5 711 aaPredicted RBP30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 NMT2O60551 498 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 DDAH1O94760 285 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 FDPSP14324 419 aaKnown RBP30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 DLGAP5Q15398 846 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 NUP133Q8WUM0 1156 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 ANKS1AQ92625 1134 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 TDRD3Q9H7E2 651 aaKnown RBP30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 TAOK2Q9UL54 1235 aa30.68■■■□□ 2.5
ATPAF1-202ENST00000371937 SPDYE2BA6NHP3 402 aa30.67■■■□□ 2.5
ATPAF1-202ENST00000371937 SPDYE6P0CI01 402 aa30.67■■■□□ 2.5
ATPAF1-202ENST00000371937 CDC37L1Q7L3B6 337 aa30.67■■■□□ 2.5
ATPAF1-202ENST00000371937 EHD4Q9H223 541 aa30.67■■■□□ 2.5
ATPAF1-202ENST00000371937 FAM198AQ9UFP1 575 aa30.67■■■□□ 2.5
ATPAF1-202ENST00000371937 NTRK3Q16288 839 aa30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 IL17RBQ9NRM6 502 aa30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 TMOD2Q9NZR1 351 aa30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 ENTPD3O75355 529 aa30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 CACNB3P54284 484 aa30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 RASSF7Q02833 373 aa30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 MTMR14Q8NCE2 650 aa30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 NEDD1Q8NHV4 660 aa30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 FHDC1Q9C0D6 1143 aaPredicted RBP30.66■■■□□ 2.5
ATPAF1-202ENST00000371937 IFNAR1P17181 557 aa30.65■■■□□ 2.5
ATPAF1-202ENST00000371937 RCSD1Q6JBY9 416 aa30.65■■■□□ 2.5
ATPAF1-202ENST00000371937 RGS22Q8NE09 1264 aa30.65■■■□□ 2.5
ATPAF1-202ENST00000371937 PPFIA3O75145 1194 aa30.64■■■□□ 2.5
ATPAF1-202ENST00000371937 TCP10Q12799 353 aa30.64■■■□□ 2.5
ATPAF1-202ENST00000371937 TROAPQ12815 778 aa30.64■■■□□ 2.5
ATPAF1-202ENST00000371937 KAT14Q9H8E8 782 aa30.64■■■□□ 2.5
ATPAF1-202ENST00000371937 RBM28Q9NW13 759 aaKnown RBP30.64■■■□□ 2.5
ATPAF1-202ENST00000371937 RPS12P25398 132 aaKnown RBP30.63■■■□□ 2.49
ATPAF1-202ENST00000371937 PI4KBQ9UBF8 816 aa30.63■■■□□ 2.49
ATPAF1-202ENST00000371937 STK36Q9NRP7 1315 aa30.63■■■□□ 2.49
ATPAF1-202ENST00000371937 ZFPM1Q8IX07 1006 aa30.63■■■□□ 2.49
ATPAF1-202ENST00000371937 EIF6P56537 245 aaKnown RBP30.62■■■□□ 2.49
ATPAF1-202ENST00000371937 SSRP1Q08945 709 aaKnown RBP30.62■■■□□ 2.49
ATPAF1-202ENST00000371937 ZSCAN29Q8IWY8 852 aaPredicted RBP30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 TRIM22Q8IYM9 498 aa30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 ZSCAN16Q9H4T2 348 aaPredicted RBP30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 FZD9O00144 591 aa30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 FMNL1O95466 1100 aaPredicted RBP30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 CTCFLQ8NI51 663 aaPredicted RBP30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 PHKBQ93100 1093 aa30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 C8orf76Q96K31 380 aa30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 COL2A1P02458 1487 aaPredicted RBP30.61■■■□□ 2.49
ATPAF1-202ENST00000371937 PLIN4Q96Q06 1357 aa30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 SKOR2Q2VWA4 1001 aaPredicted RBP30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 FOXD4L6Q3SYB3 417 aaPredicted RBP30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 FOXD4L3Q6VB84 417 aaPredicted RBP30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 FERMT3Q86UX7 667 aa30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 CRACR2BQ8N4Y2 399 aaPredicted RBP30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 WASF1Q92558 559 aa30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 MAP3K14Q99558 947 aa30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 ATRNL1Q5VV63 1379 aa30.6■■■□□ 2.49
ATPAF1-202ENST00000371937 FOXP4Q8IVH2 680 aaPredicted RBP30.59■■■□□ 2.49
ATPAF1-202ENST00000371937 ZNF70Q9UC06 446 aaPredicted RBP30.59■■■□□ 2.49
ATPAF1-202ENST00000371937 STX8Q9UNK0 236 aa30.59■■■□□ 2.49
ATPAF1-202ENST00000371937 DDTLA6NHG4 134 aaPredicted RBP30.59■■■□□ 2.49
ATPAF1-202ENST00000371937 MYO1BO43795 1136 aa30.59■■■□□ 2.49
ATPAF1-202ENST00000371937 ILDR2Q71H61 639 aa30.59■■■□□ 2.49
ATPAF1-202ENST00000371937 PNMA1Q8ND90 353 aa30.59■■■□□ 2.49
ATPAF1-202ENST00000371937 SLC26A6Q9BXS9 759 aa30.59■■■□□ 2.49
ATPAF1-202ENST00000371937 TRAK2O60296 914 aa30.58■■■□□ 2.49
ATPAF1-202ENST00000371937 SHMT1P34896 483 aa30.58■■■□□ 2.49
ATPAF1-202ENST00000371937 SPDYE2Q495Y8 402 aa30.58■■■□□ 2.49
ATPAF1-202ENST00000371937 FKBP1CQ5VVH2 108 aa30.58■■■□□ 2.49
ATPAF1-202ENST00000371937 FBXO18Q8NFZ0 1043 aa30.58■■■□□ 2.49
ATPAF1-202ENST00000371937 CHAMP1Q96JM3 812 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms