RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CTDSPL2Q05D32 466 aa18.43■□□□□ 0.54
PRPF38B-202ENST00000370022 ABCB5Q2M3G0 1257 aa18.43■□□□□ 0.54
PRPF38B-202ENST00000370022 AKNAD1Q5T1N1 836 aa18.43■□□□□ 0.54
PRPF38B-202ENST00000370022 ERO1BQ86YB8 467 aa18.43■□□□□ 0.54
PRPF38B-202ENST00000370022 STAG1Q8WVM7 1258 aa18.43■□□□□ 0.54
PRPF38B-202ENST00000370022 ELP3Q9H9T3 547 aa18.43■□□□□ 0.54
PRPF38B-202ENST00000370022 OTOFQ9HC10 1997 aa18.43■□□□□ 0.54
PRPF38B-202ENST00000370022 ORC4O43929 436 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 ECE1P42892 770 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 PPATQ06203 517 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 RRP1BQ14684 758 aaKnown RBP18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 RNF20Q5VTR2 975 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 MFSD6Q6ZSS7 791 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 ZNF444Q8N0Y2 327 aaPredicted RBP18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 ZBTB21Q9ULJ3 1066 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 GDF11O95390 407 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 CYP21A2P08686 494 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 ZBTB48P10074 688 aaPredicted RBP18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 NECTIN1Q15223 517 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 TMEM179Q6ZVK1 233 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 STK11IPQ8N1F8 1099 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 NBPF3Q9H094 633 aa18.42■□□□□ 0.54
PRPF38B-202ENST00000370022 LAMA4Q16363 1823 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 DOCK1Q14185 1865 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 GH2P01242 217 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 SLC10A3P09131 477 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 PTPRAP18433 802 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 RASA1P20936 1047 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 PAXIP1Q6ZW49 1069 aaPredicted RBP18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 RASAL3Q86YV0 1011 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 OPTNQ96CV9 577 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 CNNM2Q9H8M5 875 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 AS3MTQ9HBK9 375 aa18.41■□□□□ 0.54
PRPF38B-202ENST00000370022 USP17L5A8MUK1 530 aa18.4■□□□□ 0.54
PRPF38B-202ENST00000370022 MPHOSPH10O00566 681 aaKnown RBP18.4■□□□□ 0.54
PRPF38B-202ENST00000370022 PRDM1O75626 825 aa18.4■□□□□ 0.54
PRPF38B-202ENST00000370022 PPIL2Q13356 520 aa18.4■□□□□ 0.54
PRPF38B-202ENST00000370022 TBC1D10CQ8IV04 446 aa18.4■□□□□ 0.54
PRPF38B-202ENST00000370022 WNK4Q96J92 1243 aa18.4■□□□□ 0.54
PRPF38B-202ENST00000370022 AKR1B1P15121 316 aa18.39■□□□□ 0.53
PRPF38B-202ENST00000370022 HTRA3P83110 453 aa18.39■□□□□ 0.53
PRPF38B-202ENST00000370022 C8orf34Q49A92 452 aa18.39■□□□□ 0.53
PRPF38B-202ENST00000370022 SPRYD7Q5W111 196 aa18.39■□□□□ 0.53
PRPF38B-202ENST00000370022 OTUD5Q96G74 571 aa18.39■□□□□ 0.53
PRPF38B-202ENST00000370022 CAPNS2Q96L46 248 aa18.39■□□□□ 0.53
PRPF38B-202ENST00000370022 KRT23Q9C075 422 aa18.39■□□□□ 0.53
PRPF38B-202ENST00000370022 ZHX2Q9Y6X8 837 aa18.39■□□□□ 0.53
PRPF38B-202ENST00000370022 FAM155AB1AL88 458 aaPredicted RBP18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 SLC27A2O14975 620 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 ZKSCAN1P17029 563 aaPredicted RBP18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 JAG1P78504 1218 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 TRDNQ13061 729 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 NOGQ13253 232 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 RAB3GAP1Q15042 981 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 PPP4R3BQ5MIZ7 849 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 CREB3L3Q68CJ9 461 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 CYP4F22Q6NT55 531 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 ESR2Q92731 530 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 TOMM22Q9NS69 142 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 PLIN4Q96Q06 1357 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 MYH8P13535 1937 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 TSPY2A6NKD2 308 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 HSPA4P34932 840 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 TFAP4Q01664 338 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 NEDD1Q8NHV4 660 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 WDR18Q9BV38 432 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 KANSL2Q9H9L4 492 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 AFG3L2Q9Y4W6 797 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 TACC3Q9Y6A5 838 aa18.38■□□□□ 0.53
PRPF38B-202ENST00000370022 ATAD5Q96QE3 1844 aa18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 CXCL11O14625 94 aa18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 RANBP6O60518 1105 aaKnown RBP18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 MCCP23508 829 aa18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 TSGA10IPQ3SY00 556 aa18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 RRP12Q5JTH9 1297 aaKnown RBP18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 REM2Q8IYK8 340 aaPredicted RBP18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 ZNF280CQ8ND82 737 aa18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 USP26Q9BXU7 913 aa18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 KCNH4Q9UQ05 1017 aa18.37■□□□□ 0.53
PRPF38B-202ENST00000370022 NEDD4P46934 1319 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 E7EWF7 191 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 IRF6O14896 467 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 GUCY1A2P33402 732 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 KRT32Q14532 448 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 SEPT2Q15019 361 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 SHROOM1Q2M3G4 852 aaPredicted RBP18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 KCNB2Q92953 911 aa18.36■□□□□ 0.53
PRPF38B-202ENST00000370022 GJA5P36382 358 aa18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 MAP2K2P36507 400 aa18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 VEGFBP49765 207 aa18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 GTF2A2P52657 109 aa18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 INHBEP58166 350 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms