RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 HSPA8P11142 646 aaKnown RBP10.26□□□□□ -0.77
VPS13A-203ENST00000360280 FAM69CQ0P6D2 419 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 ARMC9Q7Z3E5 817 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 ZNF277Q9NRM2 450 aaPredicted RBP10.26□□□□□ -0.77
VPS13A-203ENST00000360280 CYP7A1P22680 504 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 CTAGE3PQ8IX95 158 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 CSGALNACT2Q8N6G5 542 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 CFAP61Q8NHU2 1237 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 THAP12O43422 761 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 CCNT1O60563 726 aaKnown RBP10.26□□□□□ -0.77
VPS13A-203ENST00000360280 P4HA1P13674 534 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 LMNB1P20700 586 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 PDE1AP54750 535 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 NONOQ15233 471 aaKnown RBP eCLIP10.26□□□□□ -0.776e-6■■■■□ 21
VPS13A-203ENST00000360280 AMFRQ9UKV5 643 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 NUDT16Q96DE0 195 aaKnown RBP10.26□□□□□ -0.77
VPS13A-203ENST00000360280 CCDC61Q9Y6R9 512 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 MAGEB6P1A0A0J9YX57 407 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 SMC5Q8IY18 1101 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 FNBP4Q8N3X1 1017 aaPredicted RBP10.25□□□□□ -0.77
VPS13A-203ENST00000360280 RUNDC3BQ96NL0 473 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 RHPN1Q8TCX5 695 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 SART1O43290 800 aaKnown RBP10.25□□□□□ -0.77
VPS13A-203ENST00000360280 AMOTL2Q9Y2J4 779 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 E9PMD0 336 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 DKC1O60832 514 aaKnown RBP eCLIP10.25□□□□□ -0.77
VPS13A-203ENST00000360280 PALM2Q8IXS6 379 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 EFHD1Q9BUP0 239 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 TTLL3Q9Y4R7 772 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 PDE4DQ08499 809 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 BACH1O14867 736 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 VPS41P49754 854 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 SPZ1Q9BXG8 430 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 VPS16Q9H269 839 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 ZBTB21Q9ULJ3 1066 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 GNA14O95837 355 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 APBA1Q02410 837 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 SUN1O94901 812 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 YWHAEP62258 255 aaKnown RBP10.25□□□□□ -0.77
VPS13A-203ENST00000360280 CEP19Q96LK0 163 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 IPO11Q9UI26 975 aaKnown RBP10.25□□□□□ -0.77
VPS13A-203ENST00000360280 SFMBT2Q5VUG0 894 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 TNNI2P48788 182 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 TEKT2Q9UIF3 430 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 IQGAP2Q13576 1575 aa10.25□□□□□ -0.77
VPS13A-203ENST00000360280 CLSTN2Q9H4D0 955 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 EEF1DP29692 281 aaKnown RBP10.24□□□□□ -0.77
VPS13A-203ENST00000360280 ATP2B3Q16720 1220 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 MLKLQ8NB16 471 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 LRRC8CQ8TDW0 803 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 HNRNPCL2B2RXH8 293 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 HNRNPCL1O60812 293 aaKnown RBP10.24□□□□□ -0.77
VPS13A-203ENST00000360280 PARP1P09874 1014 aaKnown RBP10.24□□□□□ -0.77
VPS13A-203ENST00000360280 RNASE9P60153 205 aaKnown RBP10.24□□□□□ -0.77
VPS13A-203ENST00000360280 ASPHQ12797 758 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 MAD1L1Q9Y6D9 718 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 A0A1B0GVL5 298 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 BEND3Q5T5X7 828 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 TMTC3Q6ZXV5 915 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 ANKRD36BQ8N2N9 1353 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 FAM8A1Q9UBU6 413 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 TSHZ3Q63HK5 1081 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 LRRC2Q9BYS8 371 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 CCDC51Q96ER9 411 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 PAWRQ96IZ0 340 aaKnown RBP10.24□□□□□ -0.77
VPS13A-203ENST00000360280 GRIN2BQ13224 1484 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 GNGT1P63211 74 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 PICALMQ13492 652 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 SCYL3Q8IZE3 742 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 BCAS4Q8TDM0 211 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 CARD6Q9BX69 1037 aa10.24□□□□□ -0.77
VPS13A-203ENST00000360280 EFCAB8A8MWE9 144 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 SKIP12755 728 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 DEXIO95424 95 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 LMNAP02545 664 aaKnown RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 RIOK1Q9BRS2 568 aaKnown RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 LLPHQ9BRT6 129 aaKnown RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 IL15P40933 162 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 GIMAP4Q9NUV9 329 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 POLR2DO15514 142 aaKnown RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 GARSP41250 739 aaKnown RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 SLC9C2Q5TAH2 1124 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 TXLNGQ9NUQ3 528 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 EIF3CLB5ME19 914 aaKnown RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 PCYT1AP49585 367 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 AK2P54819 239 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 FANCCQ00597 558 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 ZKSCAN8Q15776 578 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 CDKL2Q92772 493 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 EIF3CQ99613 913 aaKnown RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 POLR3CQ9BUI4 534 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 PYGLP06737 847 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 KLHL7Q8IXQ5 586 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 CCDC169A6NNP5 214 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 KLHL30Q0D2K2 578 aa10.23□□□□□ -0.77
VPS13A-203ENST00000360280 SND1Q7KZF4 910 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS13A-203ENST00000360280 GNGT2O14610 69 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms