RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ZNF483Q8TF39 744 aaPredicted RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 UTP6Q9NYH9 597 aaKnown RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 ZRANB1Q9UGI0 708 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 HDAC9Q9UKV0 1011 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 ARHGAP10A1A4S6 786 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 TARSL2A2RTX5 802 aaKnown RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 PPP1R14CQ8TAE6 165 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 DHX58Q96C10 678 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 RNF14Q9UBS8 474 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 PPP1R2P41236 205 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 BIRC3Q13489 604 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 C3orf20Q8ND61 904 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 HVCN1Q96D96 273 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 EPN3Q9H201 632 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 POLR1AO95602 1720 aaPredicted RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 CNGA1P29973 690 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 SGSM3Q96HU1 749 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 AATFQ9NY61 560 aaKnown RBP eCLIP5.58□□□□□ -1.52
SKP1-202ENST00000353411 TPCN1Q9ULQ1 816 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 ARHGEF11O15085 1522 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 TXNDC9O14530 226 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 ZNF202O95125 648 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 RFX1P22670 979 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 PAX7P23759 505 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 HSP90AA4PQ58FG1 418 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 RRAGBQ5VZM2 374 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 TSC22D4Q9Y3Q8 395 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 VIRMAQ69YN4 1812 aaKnown RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 SSRP1Q08945 709 aaKnown RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 NAA30Q147X3 362 aaPredicted RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 KCTD16Q68DU8 428 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 MYLK4Q86YV6 388 aaPredicted RBP5.58□□□□□ -1.52
SKP1-202ENST00000353411 CUL5Q93034 780 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 HYOU1Q9Y4L1 999 aa5.58□□□□□ -1.52
SKP1-202ENST00000353411 A0A1B0GVL5 298 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 PIP4K2CQ8TBX8 421 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.57□□□□□ -1.52
SKP1-202ENST00000353411 NUF2Q9BZD4 464 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 NACAP1Q9BZK3 213 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 GMNCA6NCL1 334 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 GGCXP38435 758 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 PLA2G4AP47712 749 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 EIF3BP55884 814 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 ESRRGP62508 458 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 ANKRD20A3Q5VUR7 823 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 PALMDQ9NP74 551 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 TMED10P49755 219 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 CCT2P78371 535 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 ADALQ6DHV7 355 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 FNBP4Q8N3X1 1017 aaPredicted RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 ZNF280CQ8ND82 737 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.57□□□□□ -1.52
SKP1-202ENST00000353411 THOC1Q96FV9 657 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 KCNF1Q9H3M0 494 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 REREQ9P2R6 1566 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 UHRF1BP1Q6BDS2 1440 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 RPS6KA5O75582 802 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 POTEJP0CG39 1038 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 KRT13P13646 458 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 GLE1Q53GS7 698 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 SPDYE1Q8NFV5 336 aaPredicted RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 TM6SF1Q9BZW5 370 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 PRM3Q9NNZ6 103 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 ATG3Q9NT62 314 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 SYNRGQ9UMZ2 1314 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 KIF24Q5T7B8 1368 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 NUTM2FA1L443 756 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 STX2P32856 288 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 INAQ16352 499 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 NUTM2GQ5VZR2 741 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 AIDAQ96BJ3 306 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 CCDC43Q96MW1 224 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 LRRC27Q9C0I9 530 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 ZNF148Q9UQR1 794 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 AHCYL1O43865 530 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 MKRN3Q13064 507 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 NLRP14Q86W24 1093 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 COG1Q8WTW3 980 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 INTS9Q9NV88 658 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 G3BP2Q9UN86 482 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 NFE2L3Q9Y4A8 694 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 RBM8AQ9Y5S9 174 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 CTNND1O60716 968 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 CYLC2Q14093 348 aaPredicted RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 ZC3H18Q86VM9 953 aaKnown RBP5.57□□□□□ -1.52
SKP1-202ENST00000353411 TRIM42Q8IWZ5 723 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 L2HGDHQ9H9P8 463 aa5.57□□□□□ -1.52
SKP1-202ENST00000353411 NCOA3Q9Y6Q9 1424 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 ADKP55263 362 aaKnown RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 ZC3H15Q8WU90 426 aaKnown RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 E2F6O75461 281 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 TCERG1LQ5VWI1 586 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 ENAHQ8N8S7 591 aaPredicted RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 C17orf50Q8WW18 174 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 KRT9P35527 623 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 CUL4BQ13620 913 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 C1orf141Q5JVX7 400 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 FAM81AQ8TBF8 368 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 PANX2Q96RD6 677 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms