RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 ABL1P00519 1130 aa24.33■■□□□ 1.49
TRIM3-201ENST00000345851 PRR29P0C7W0 189 aa24.33■■□□□ 1.49
TRIM3-201ENST00000345851 ZNF18P17022 549 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 OSBP2Q969R2 916 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 ISCA1Q9BUE6 129 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 CTAGE9A4FU28 777 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 PPP6R2O75170 966 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 FAM182BQ5T319 152 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 KRT40Q6A162 431 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 NOA1Q8NC60 698 aaKnown RBP24.32■■□□□ 1.48
TRIM3-201ENST00000345851 PHKBQ93100 1093 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 RNF113AO15541 343 aaKnown RBP24.32■■□□□ 1.48
TRIM3-201ENST00000345851 RBL2Q08999 1139 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 ATG9AQ7Z3C6 839 aa24.32■■□□□ 1.48
TRIM3-201ENST00000345851 CTAGE15A4D2H0 777 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 CTAGE8P0CG41 777 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 ANTXR2P58335 489 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 CTAGE6Q86UF2 777 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 CTAGE4Q8IX94 777 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 GEMIN8Q9NWZ8 242 aaKnown RBP24.31■■□□□ 1.48
TRIM3-201ENST00000345851 NUP188Q5SRE5 1749 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 WASHC4Q2M389 1173 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 ACRBPQ8NEB7 543 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 NGLY1Q96IV0 654 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 MED15Q96RN5 788 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 PLCH1Q4KWH8 1693 aa24.31■■□□□ 1.48
TRIM3-201ENST00000345851 EP400Q96L91 3159 aa24.3■■□□□ 1.48
TRIM3-201ENST00000345851 PPFIBP1Q86W92 1011 aa24.3■■□□□ 1.48
TRIM3-201ENST00000345851 GPATCH11Q8N954 259 aa24.3■■□□□ 1.48
TRIM3-201ENST00000345851 RNF40O75150 1001 aa24.3■■□□□ 1.48
TRIM3-201ENST00000345851 IFIT1P09914 478 aaKnown RBP24.3■■□□□ 1.48
TRIM3-201ENST00000345851 IMMTQ16891 758 aaKnown RBP24.3■■□□□ 1.48
TRIM3-201ENST00000345851 SMIM5Q71RC9 77 aa24.3■■□□□ 1.48
TRIM3-201ENST00000345851 RALYLQ86SE5 291 aaKnown RBP24.3■■□□□ 1.48
TRIM3-201ENST00000345851 IGSF22Q8N9C0 903 aa24.3■■□□□ 1.48
TRIM3-201ENST00000345851 MAP3K14Q99558 947 aa24.3■■□□□ 1.48
TRIM3-201ENST00000345851 COL22A1Q8NFW1 1626 aaPredicted RBP24.29■■□□□ 1.48
TRIM3-201ENST00000345851 ATP6V1AP38606 617 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 FKBP4Q02790 459 aaKnown RBP eCLIP24.29■■□□□ 1.48
TRIM3-201ENST00000345851 POSTNQ15063 836 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 MAP3K15Q6ZN16 1313 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 GRIN1Q05586 938 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 NR1I3Q14994 352 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 TTC39AQ5SRH9 613 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 KLHL10Q6JEL2 608 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 BRMS1Q9HCU9 246 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 DENND2AQ9ULE3 1009 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 SPATA31A5Q5VU36 1347 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 SPATA31A7Q8IWB4 1347 aa24.29■■□□□ 1.48
TRIM3-201ENST00000345851 ATP2B1P20020 1258 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 NCAPH2Q6IBW4 605 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 PTF1AQ7RTS3 328 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 MB21D2Q8IYB1 491 aaPredicted RBP24.28■■□□□ 1.48
TRIM3-201ENST00000345851 GDAP1L1Q96MZ0 367 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 DEF6Q9H4E7 631 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 UBE2Q2LH0YL09 131 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 FGAP02671 866 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 STX17P56962 302 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 AKAP17AQ02040 695 aaKnown RBP24.28■■□□□ 1.48
TRIM3-201ENST00000345851 SERTAD1Q9UHV2 236 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 POLR2DO15514 142 aaKnown RBP24.28■■□□□ 1.48
TRIM3-201ENST00000345851 GIGYF2Q6Y7W6 1299 aaKnown RBP24.28■■□□□ 1.48
TRIM3-201ENST00000345851 MICALL1Q8N3F8 863 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 ENOX1Q8TC92 643 aaKnown RBP24.28■■□□□ 1.48
TRIM3-201ENST00000345851 RIN2Q8WYP3 895 aaPredicted RBP24.28■■□□□ 1.48
TRIM3-201ENST00000345851 PANX2Q96RD6 677 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 GBP3Q9H0R5 595 aa24.28■■□□□ 1.48
TRIM3-201ENST00000345851 HOOK1Q9UJC3 728 aaKnown RBP24.28■■□□□ 1.48
TRIM3-201ENST00000345851 TJP1Q07157 1748 aa24.27■■□□□ 1.48
TRIM3-201ENST00000345851 MDM2Q00987 491 aaPredicted RBP24.27■■□□□ 1.48
TRIM3-201ENST00000345851 DZIP3Q86Y13 1208 aaKnown RBP24.27■■□□□ 1.48
TRIM3-201ENST00000345851 PPFIA4O75335 1185 aa24.27■■□□□ 1.48
TRIM3-201ENST00000345851 FOXP2O15409 715 aa24.26■■□□□ 1.47
TRIM3-201ENST00000345851 AFAP1L1Q8TED9 768 aa24.26■■□□□ 1.47
TRIM3-201ENST00000345851 ACBD3Q9H3P7 528 aa24.26■■□□□ 1.47
TRIM3-201ENST00000345851 CCDC57Q2TAC2 916 aa24.26■■□□□ 1.47
TRIM3-201ENST00000345851 NAPGQ99747 312 aaPredicted RBP24.26■■□□□ 1.47
TRIM3-201ENST00000345851 DOT1LQ8TEK3 1739 aa24.26■■□□□ 1.47
TRIM3-201ENST00000345851 FAM237AA0A1B0GTK4 181 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 CASP14P31944 242 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 NLRP10Q86W26 655 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 MICU3Q86XE3 530 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 FBXL16Q8N461 479 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 MLKLQ8NB16 471 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 NCOA7Q8NI08 942 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 MED4Q9NPJ6 270 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 SEC31BQ9NQW1 1179 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 A0A1B0GTH6 734 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 ITPK1Q13572 414 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 MSL3Q8N5Y2 521 aaKnown RBP24.25■■□□□ 1.47
TRIM3-201ENST00000345851 NCAPGQ9BPX3 1015 aa24.25■■□□□ 1.47
TRIM3-201ENST00000345851 METAP2P50579 478 aaKnown RBP eCLIP24.25■■□□□ 1.47
TRIM3-201ENST00000345851 DNAJC21Q5F1R6 531 aaKnown RBP24.25■■□□□ 1.47
TRIM3-201ENST00000345851 KRI1Q8N9T8 703 aaKnown RBP24.25■■□□□ 1.47
TRIM3-201ENST00000345851 TRMT112Q9UI30 125 aaKnown RBP24.25■■□□□ 1.47
TRIM3-201ENST00000345851 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.24■■□□□ 1.47
TRIM3-201ENST00000345851 EYA2O00167 538 aa24.24■■□□□ 1.47
TRIM3-201ENST00000345851 RABEP2Q9H5N1 569 aa24.24■■□□□ 1.47
TRIM3-201ENST00000345851 TRDNQ13061 729 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms