RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 SCRN1Q12765 414 aa21.65■■□□□ 1.06
SH2B3-201ENST00000341259 ZNF589Q86UQ0 364 aaPredicted RBP21.65■■□□□ 1.06
SH2B3-201ENST00000341259 IMPACTQ9P2X3 320 aa21.65■■□□□ 1.06
SH2B3-201ENST00000341259 USPL1Q5W0Q7 1092 aa21.65■■□□□ 1.06
SH2B3-201ENST00000341259 NOSTRINQ8IVI9 506 aa21.65■■□□□ 1.06
SH2B3-201ENST00000341259 RASAL2Q9UJF2 1139 aa21.65■■□□□ 1.06
SH2B3-201ENST00000341259 PFKFB1P16118 471 aa21.64■■□□□ 1.06
SH2B3-201ENST00000341259 SUPT20HQ8NEM7 779 aa21.64■■□□□ 1.06
SH2B3-201ENST00000341259 SERTAD1Q9UHV2 236 aa21.64■■□□□ 1.06
SH2B3-201ENST00000341259 NFE2L3Q9Y4A8 694 aa21.64■■□□□ 1.06
SH2B3-201ENST00000341259 HEG1Q9ULI3 1381 aa21.64■■□□□ 1.06
SH2B3-201ENST00000341259 M0R2C6 588 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 BACH1O14867 736 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 CALCRLQ16602 461 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 FANCBQ8NB91 859 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 FRMD4BQ9Y2L6 1034 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 TNKSO95271 1327 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 POLA2Q14181 598 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 ZYXQ15942 572 aaKnown RBP21.64■■□□□ 1.05
SH2B3-201ENST00000341259 NCAPH2Q6IBW4 605 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 ABCA6Q8N139 1617 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 NR1I2O75469 434 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 CD2BP2O95400 341 aaKnown RBP21.64■■□□□ 1.05
SH2B3-201ENST00000341259 LARGE2Q8N3Y3 721 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 GPT2Q8TD30 523 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 USP40Q9NVE5 1235 aa21.64■■□□□ 1.05
SH2B3-201ENST00000341259 ADGRB3O60242 1522 aa21.63■■□□□ 1.05
SH2B3-201ENST00000341259 RNF187Q5TA31 235 aaPredicted RBP21.63■■□□□ 1.05
SH2B3-201ENST00000341259 CABP7Q86V35 215 aa21.63■■□□□ 1.05
SH2B3-201ENST00000341259 RRAGDQ9NQL2 400 aaPredicted RBP21.63■■□□□ 1.05
SH2B3-201ENST00000341259 CLEC11AQ9Y240 323 aa21.63■■□□□ 1.05
SH2B3-201ENST00000341259 QRICH2Q9H0J4 1663 aa21.63■■□□□ 1.05
SH2B3-201ENST00000341259 TUBB4BP68371 445 aa21.63■■□□□ 1.05
SH2B3-201ENST00000341259 CYP26C1Q6V0L0 522 aa21.63■■□□□ 1.05
SH2B3-201ENST00000341259 CALCOCO1Q9P1Z2 691 aa21.63■■□□□ 1.05
SH2B3-201ENST00000341259 BLZF1Q9H2G9 400 aa21.62■■□□□ 1.05
SH2B3-201ENST00000341259 APBA3O96018 575 aa21.62■■□□□ 1.05
SH2B3-201ENST00000341259 ATP2B4P23634 1241 aa21.62■■□□□ 1.05
SH2B3-201ENST00000341259 TTF2Q9UNY4 1162 aaKnown RBP21.62■■□□□ 1.05
SH2B3-201ENST00000341259 FAM212AQ96EL1 285 aa21.62■■□□□ 1.05
SH2B3-201ENST00000341259 USH1GQ495M9 461 aa21.62■■□□□ 1.05
SH2B3-201ENST00000341259 REXO1Q8N1G1 1221 aaKnown RBP21.62■■□□□ 1.05
SH2B3-201ENST00000341259 RHOXF2BP0C7M4 288 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 ACTN2P35609 894 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 NELFBQ8WX92 580 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 BBXQ8WY36 941 aaPredicted RBP21.61■■□□□ 1.05
SH2B3-201ENST00000341259 RHOXF2Q9BQY4 288 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 PICK1Q9NRD5 415 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 CYP21A2P08686 494 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 C17orf53Q8N3J3 647 aaPredicted RBP21.61■■□□□ 1.05
SH2B3-201ENST00000341259 STK24Q9Y6E0 443 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 SMCO2A6NFE2 343 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 CALUO43852 315 aaPredicted RBP21.61■■□□□ 1.05
SH2B3-201ENST00000341259 STAMQ92783 540 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 ATG3Q9NT62 314 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 E9PCH4 1651 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 PTPN12Q05209 780 aaKnown RBP21.61■■□□□ 1.05
SH2B3-201ENST00000341259 UBE4AQ14139 1066 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 TAB2Q9NYJ8 693 aa21.61■■□□□ 1.05
SH2B3-201ENST00000341259 FSD2A1L4K1 749 aa21.6■■□□□ 1.05
SH2B3-201ENST00000341259 DYMQ7RTS9 669 aa21.6■■□□□ 1.05
SH2B3-201ENST00000341259 CCDC155Q8N6L0 562 aa21.6■■□□□ 1.05
SH2B3-201ENST00000341259 BIN2Q9UBW5 565 aaPredicted RBP21.6■■□□□ 1.05
SH2B3-201ENST00000341259 PDE6BP35913 854 aa21.6■■□□□ 1.05
SH2B3-201ENST00000341259 TRMT44Q8IYL2 757 aaKnown RBP21.6■■□□□ 1.05
SH2B3-201ENST00000341259 CHAMP1Q96JM3 812 aa21.6■■□□□ 1.05
SH2B3-201ENST00000341259 GJC1P36383 396 aa21.6■■□□□ 1.05
SH2B3-201ENST00000341259 ANTXR1Q9H6X2 564 aa21.6■■□□□ 1.05
SH2B3-201ENST00000341259 KIAA1468Q9P260 1216 aa21.6■■□□□ 1.05
SH2B3-201ENST00000341259 TEKT1Q969V4 418 aa21.59■■□□□ 1.05
SH2B3-201ENST00000341259 NCAPD2Q15021 1401 aa21.59■■□□□ 1.05
SH2B3-201ENST00000341259 ZNF804BA4D1E1 1349 aa21.59■■□□□ 1.05
SH2B3-201ENST00000341259 BLIDQ8IZY5 108 aa21.59■■□□□ 1.05
SH2B3-201ENST00000341259 DDAH1O94760 285 aa21.59■■□□□ 1.05
SH2B3-201ENST00000341259 EEF2P13639 858 aaKnown RBP21.59■■□□□ 1.05
SH2B3-201ENST00000341259 FMNL3Q8IVF7 1028 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 PLCD4Q9BRC7 762 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 BTDP43251 543 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 PPP2R3AQ06190 1150 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 UIMC1Q96RL1 719 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 NLRP10Q86W26 655 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 NUP58Q9BVL2 599 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 FAM107BQ9H098 131 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 TMOD4Q9NZQ9 345 aa21.58■■□□□ 1.05
SH2B3-201ENST00000341259 CETN3O15182 167 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 PNMA1Q8ND90 353 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 FERMT1Q9BQL6 677 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 SEC31BQ9NQW1 1179 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 PCDHA7Q9UN72 937 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 SETBP1Q9Y6X0 1596 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 CEP152O94986 1710 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 OPA1O60313 960 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 VWA3BQ502W6 1294 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 ATP10DQ9P241 1426 aa21.58■■□□□ 1.04
SH2B3-201ENST00000341259 SASH1O94885 1247 aa21.57■■□□□ 1.04
SH2B3-201ENST00000341259 PI4K2BQ8TCG2 481 aa21.57■■□□□ 1.04
SH2B3-201ENST00000341259 DDX12PQ92771 950 aa21.57■■□□□ 1.04
SH2B3-201ENST00000341259 CMA1P23946 247 aa21.57■■□□□ 1.04
SH2B3-201ENST00000341259 ERO1AQ96HE7 468 aa21.57■■□□□ 1.04
SH2B3-201ENST00000341259 PPP1R9BQ96SB3 815 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms