RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ARMC9Q7Z3E5 817 aa9.46□□□□□ -0.89
SKA2-201ENST00000330137 NOA1Q8NC60 698 aaKnown RBP9.46□□□□□ -0.89
SKA2-201ENST00000330137 RNF217Q8TC41 542 aa9.46□□□□□ -0.89
SKA2-201ENST00000330137 FBXW7Q969H0 707 aa9.46□□□□□ -0.89
SKA2-201ENST00000330137 HOOK2Q96ED9 719 aa9.46□□□□□ -0.89
SKA2-201ENST00000330137 C8orf76Q96K31 380 aa9.46□□□□□ -0.89
SKA2-201ENST00000330137 NBPF3Q9H094 633 aa9.46□□□□□ -0.89
SKA2-201ENST00000330137 SIL1Q9H173 461 aa9.46□□□□□ -0.89
SKA2-201ENST00000330137 IGSF1Q8N6C5 1336 aa9.46□□□□□ -0.89
SKA2-201ENST00000330137 SOWAHDA6NJG2 315 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 GNAT3A8MTJ3 354 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 NAP1L1P55209 391 aaKnown RBP9.46□□□□□ -0.9
SKA2-201ENST00000330137 MDM2Q00987 491 aaPredicted RBP9.46□□□□□ -0.9
SKA2-201ENST00000330137 G3BP1Q13283 466 aaKnown RBP eCLIP9.46□□□□□ -0.9
SKA2-201ENST00000330137 WASHC4Q2M389 1173 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 KDM7AQ6ZMT4 941 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 ZNF589Q86UQ0 364 aaPredicted RBP9.46□□□□□ -0.9
SKA2-201ENST00000330137 DESI2Q9BSY9 194 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 PLEKHA4Q9H4M7 779 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 NFE2L3Q9Y4A8 694 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 DTNBO60941 627 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 MORC3Q14149 939 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 CAVIN3Q969G5 261 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 PSMD1Q99460 953 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 HELLSQ9NRZ9 838 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 SPATS2LQ9NUQ6 558 aaKnown RBP9.46□□□□□ -0.9
SKA2-201ENST00000330137 SAR1BQ9Y6B6 198 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 TAF6LQ9Y6J9 622 aa9.46□□□□□ -0.9
SKA2-201ENST00000330137 NWD1Q149M9 1564 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 TECPR2O15040 1411 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 PPFIA3O75145 1194 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 NEBLO76041 1014 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 NEFHP12036 1026 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 FDPSP14324 419 aaKnown RBP9.45□□□□□ -0.9
SKA2-201ENST00000330137 ATF3P18847 181 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 PLCD1P51178 756 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
SKA2-201ENST00000330137 CD302Q8IX05 232 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 MMGT1Q8N4V1 131 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 PTPRUQ92729 1446 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 IRX2Q9BZI1 471 aaPredicted RBP9.45□□□□□ -0.9
SKA2-201ENST00000330137 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 XIRP1Q702N8 1843 aaKnown RBP9.45□□□□□ -0.9
SKA2-201ENST00000330137 AKAP17AQ02040 695 aaKnown RBP9.45□□□□□ -0.9
SKA2-201ENST00000330137 HSP90AB2PQ58FF8 381 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 SAMD1Q6SPF0 538 aaPredicted RBP9.45□□□□□ -0.9
SKA2-201ENST00000330137 C6orf89Q6UWU4 347 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 METTL16Q86W50 562 aaKnown RBP9.45□□□□□ -0.9
SKA2-201ENST00000330137 SPATA20Q8TB22 786 aa9.45□□□□□ -0.9
SKA2-201ENST00000330137 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 ZMYM6O95789 1325 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 MAP3K19Q56UN5 1328 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 MYO1FO00160 1098 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 LIN7AO14910 233 aaPredicted RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 PRLRP16471 622 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 EPHB4P54760 987 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 RWDD2BP57060 319 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 KIF23Q02241 960 aaPredicted RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 GOLGA8FQ08AF8 430 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 GOLGA8DPQ0D2H9 430 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 SPATA1Q5VX52 437 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 CRELD2Q6UXH1 353 aaPredicted RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 PARP9Q8IXQ6 854 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 CCHCR1Q8TD31 782 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 ITFG2Q969R8 447 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 EAF2Q96CJ1 260 aaPredicted RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 RSRC1Q96IZ7 334 aaKnown RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 TEX13AQ9BXU3 409 aaPredicted RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 ADD3Q9UEY8 706 aaKnown RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 PCDHA5Q9Y5H7 936 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 FLT4P35916 1363 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 PALLDQ8WX93 1383 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 SASH1O94885 1247 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 PIP4K2AP48426 406 aaPredicted RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 VASPP50552 380 aaPredicted RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 LMNB2Q03252 620 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 RBL2Q08999 1139 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 PTPAQ15257 358 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 PPP4R3AQ6IN85 833 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 APTXQ7Z2E3 356 aaKnown RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 CCDC13Q8IYE1 715 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 FNBP4Q8N3X1 1017 aaPredicted RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
SKA2-201ENST00000330137 TATDN2Q93075 761 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 TOPAZ1Q8N9V7 1692 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 KDM3BQ7LBC6 1761 aa9.44□□□□□ -0.9
SKA2-201ENST00000330137 MROH7-TTC4A0A0A0MT08 1334 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 SPEF2Q9C093 1822 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 LRRC10BA6NIK2 292 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 FAM107AO95990 144 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 PNOCQ13519 176 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 MTF1Q14872 753 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 GLE1Q53GS7 698 aaKnown RBP9.43□□□□□ -0.9
SKA2-201ENST00000330137 LACTB2Q53H82 288 aaPredicted RBP9.43□□□□□ -0.9
SKA2-201ENST00000330137 AP1ARQ63HQ0 302 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 SHC4Q6S5L8 630 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 APLFQ8IW19 511 aaPredicted RBP9.43□□□□□ -0.9
SKA2-201ENST00000330137 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.43□□□□□ -0.91e-8■■■■■ 101.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms