RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C17orf99Q6UX52 265 aa33.27■■■□□ 2.92
ATPAF1-201ENST00000329231 AGTPBP1Q9UPW5 1226 aa33.27■■■□□ 2.92
ATPAF1-201ENST00000329231 MYH7P12883 1935 aa33.26■■■□□ 2.92
ATPAF1-201ENST00000329231 ZFYP08048 801 aaPredicted RBP33.26■■■□□ 2.91
ATPAF1-201ENST00000329231 JAG1P78504 1218 aa33.26■■■□□ 2.91
ATPAF1-201ENST00000329231 KIF22Q14807 665 aa33.26■■■□□ 2.91
ATPAF1-201ENST00000329231 DDRGK1Q96HY6 314 aa33.26■■■□□ 2.91
ATPAF1-201ENST00000329231 PUS7LQ9H0K6 701 aaKnown RBP33.26■■■□□ 2.91
ATPAF1-201ENST00000329231 CPA4Q9UI42 421 aa33.26■■■□□ 2.91
ATPAF1-201ENST00000329231 PRKAB2O43741 272 aa33.25■■■□□ 2.91
ATPAF1-201ENST00000329231 ADGRA2Q96PE1 1338 aa33.25■■■□□ 2.91
ATPAF1-201ENST00000329231 NAV1Q8NEY1 1877 aa33.25■■■□□ 2.91
ATPAF1-201ENST00000329231 PTPRFP10586 1907 aa33.24■■■□□ 2.91
ATPAF1-201ENST00000329231 RNF113AO15541 343 aaKnown RBP33.24■■■□□ 2.91
ATPAF1-201ENST00000329231 CYP2C8P10632 490 aa33.24■■■□□ 2.91
ATPAF1-201ENST00000329231 HMGCS2P54868 508 aa33.24■■■□□ 2.91
ATPAF1-201ENST00000329231 CERKLQ49MI3 558 aaPredicted RBP33.24■■■□□ 2.91
ATPAF1-201ENST00000329231 SH3D19Q5HYK7 790 aa33.24■■■□□ 2.91
ATPAF1-201ENST00000329231 DDX60LQ5H9U9 1706 aaKnown RBP33.24■■■□□ 2.91
ATPAF1-201ENST00000329231 SALL3Q9BXA9 1300 aa33.24■■■□□ 2.91
ATPAF1-201ENST00000329231 GH2P01242 217 aa33.23■■■□□ 2.91
ATPAF1-201ENST00000329231 BACE1P56817 501 aa33.23■■■□□ 2.91
ATPAF1-201ENST00000329231 LACTBP83111 547 aaPredicted RBP33.23■■■□□ 2.91
ATPAF1-201ENST00000329231 GABPAQ06546 454 aa33.23■■■□□ 2.91
ATPAF1-201ENST00000329231 SHROOM1Q2M3G4 852 aaPredicted RBP33.23■■■□□ 2.91
ATPAF1-201ENST00000329231 APPBP2Q92624 585 aa33.23■■■□□ 2.91
ATPAF1-201ENST00000329231 TAOK2Q9UL54 1235 aa33.23■■■□□ 2.91
ATPAF1-201ENST00000329231 SLC4A4Q9Y6R1 1079 aa33.23■■■□□ 2.91
ATPAF1-201ENST00000329231 SHMT1P34896 483 aa33.22■■■□□ 2.91
ATPAF1-201ENST00000329231 AMOTL1Q8IY63 956 aa33.22■■■□□ 2.91
ATPAF1-201ENST00000329231 PNMA3Q9UL41 463 aa33.22■■■□□ 2.91
ATPAF1-201ENST00000329231 PTPN22Q9Y2R2 807 aa33.22■■■□□ 2.91
ATPAF1-201ENST00000329231 C19orf81C9J6K1 198 aa33.21■■■□□ 2.91
ATPAF1-201ENST00000329231 CAP1Q01518 475 aa33.21■■■□□ 2.91
ATPAF1-201ENST00000329231 PABPC4Q13310 644 aaKnown RBP eCLIP33.21■■■□□ 2.91
ATPAF1-201ENST00000329231 MTMR2Q13614 643 aa33.21■■■□□ 2.91
ATPAF1-201ENST00000329231 ABCB5Q2M3G0 1257 aa33.21■■■□□ 2.91
ATPAF1-201ENST00000329231 TREML2Q5T2D2 321 aa33.21■■■□□ 2.91
ATPAF1-201ENST00000329231 SMC5Q8IY18 1101 aa33.21■■■□□ 2.91
ATPAF1-201ENST00000329231 CABP5Q9NP86 173 aa33.21■■■□□ 2.91
ATPAF1-201ENST00000329231 USP17L10C9JJH3 530 aa33.2■■■□□ 2.91
ATPAF1-201ENST00000329231 SMCR8Q8TEV9 937 aaPredicted RBP33.2■■■□□ 2.91
ATPAF1-201ENST00000329231 TMOD4Q9NZQ9 345 aa33.2■■■□□ 2.91
ATPAF1-201ENST00000329231 STAP2Q9UGK3 403 aa33.2■■■□□ 2.91
ATPAF1-201ENST00000329231 CYP2D6P10635 497 aa33.19■■■□□ 2.9
ATPAF1-201ENST00000329231 OSBP2Q969R2 916 aa33.19■■■□□ 2.9
ATPAF1-201ENST00000329231 STRBPQ96SI9 672 aaKnown RBP33.19■■■□□ 2.9
ATPAF1-201ENST00000329231 FSD1Q9BTV5 496 aa33.19■■■□□ 2.9
ATPAF1-201ENST00000329231 SWAP70Q9UH65 585 aa33.19■■■□□ 2.9
ATPAF1-201ENST00000329231 GNRH1P01148 92 aa33.18■■■□□ 2.9
ATPAF1-201ENST00000329231 BCRP11274 1271 aa33.18■■■□□ 2.9
ATPAF1-201ENST00000329231 IGHDP01880 384 aa33.17■■■□□ 2.9
ATPAF1-201ENST00000329231 PDE1AP54750 535 aa33.17■■■□□ 2.9
ATPAF1-201ENST00000329231 EVX2Q03828 476 aa33.17■■■□□ 2.9
ATPAF1-201ENST00000329231 RAB3GAP1Q15042 981 aa33.17■■■□□ 2.9
ATPAF1-201ENST00000329231 C12orf60Q5U649 245 aa33.17■■■□□ 2.9
ATPAF1-201ENST00000329231 ARHGAP39Q9C0H5 1083 aa33.17■■■□□ 2.9
ATPAF1-201ENST00000329231 USP17L12C9JPN9 530 aa33.16■■■□□ 2.9
ATPAF1-201ENST00000329231 USP17L21D6R901 530 aa33.16■■■□□ 2.9
ATPAF1-201ENST00000329231 OSBPP22059 807 aa33.16■■■□□ 2.9
ATPAF1-201ENST00000329231 LNPKQ9C0E8 428 aa33.16■■■□□ 2.9
ATPAF1-201ENST00000329231 LOC285556D6RIA3 1793 aa33.16■■■□□ 2.9
ATPAF1-201ENST00000329231 B4GALNT3Q6L9W6 998 aa33.15■■■□□ 2.9
ATPAF1-201ENST00000329231 GPAA1O43292 621 aa33.14■■■□□ 2.9
ATPAF1-201ENST00000329231 GNAT2P19087 354 aa33.14■■■□□ 2.9
ATPAF1-201ENST00000329231 PSMC4P43686 418 aa33.14■■■□□ 2.9
ATPAF1-201ENST00000329231 GIMAP6Q6P9H5 292 aa33.14■■■□□ 2.9
ATPAF1-201ENST00000329231 DYNLL2Q96FJ2 89 aa33.14■■■□□ 2.9
ATPAF1-201ENST00000329231 CTR9Q6PD62 1173 aa33.13■■■□□ 2.89
ATPAF1-201ENST00000329231 USP17L2Q6R6M4 530 aa33.13■■■□□ 2.89
ATPAF1-201ENST00000329231 SLC44A5Q8NCS7 719 aa33.13■■■□□ 2.89
ATPAF1-201ENST00000329231 FEZ1Q99689 392 aa33.13■■■□□ 2.89
ATPAF1-201ENST00000329231 ARPP21Q9UBL0 812 aaPredicted RBP33.13■■■□□ 2.89
ATPAF1-201ENST00000329231 CYP2D7A0A087X1C5 515 aa33.12■■■□□ 2.89
ATPAF1-201ENST00000329231 MPHOSPH10O00566 681 aaKnown RBP33.12■■■□□ 2.89
ATPAF1-201ENST00000329231 HOXD10P28358 340 aa33.12■■■□□ 2.89
ATPAF1-201ENST00000329231 PRMT2P55345 433 aa33.12■■■□□ 2.89
ATPAF1-201ENST00000329231 CHD1LQ86WJ1 897 aa33.12■■■□□ 2.89
ATPAF1-201ENST00000329231 EVI5LQ96CN4 794 aa33.12■■■□□ 2.89
ATPAF1-201ENST00000329231 ASCC2Q9H1I8 757 aaPredicted RBP33.12■■■□□ 2.89
ATPAF1-201ENST00000329231 GSG1L2A8MUP6 293 aa33.11■■■□□ 2.89
ATPAF1-201ENST00000329231 M0R2C6 588 aa33.11■■■□□ 2.89
ATPAF1-201ENST00000329231 FMNL1O95466 1100 aaPredicted RBP33.11■■■□□ 2.89
ATPAF1-201ENST00000329231 HOXA7P31268 230 aaPredicted RBP33.11■■■□□ 2.89
ATPAF1-201ENST00000329231 GCLCP48506 637 aaPredicted RBP33.11■■■□□ 2.89
ATPAF1-201ENST00000329231 USP14P54578 494 aa33.11■■■□□ 2.89
ATPAF1-201ENST00000329231 NUCB1Q02818 461 aa33.11■■■□□ 2.89
ATPAF1-201ENST00000329231 TRIM47Q96LD4 638 aa33.11■■■□□ 2.89
ATPAF1-201ENST00000329231 BAZ2AQ9UIF9 1905 aaKnown RBP33.1■■■□□ 2.89
ATPAF1-201ENST00000329231 ECM2O94769 699 aaPredicted RBP33.1■■■□□ 2.89
ATPAF1-201ENST00000329231 FCGRTP55899 365 aa33.1■■■□□ 2.89
ATPAF1-201ENST00000329231 IRX3P78415 501 aaPredicted RBP33.1■■■□□ 2.89
ATPAF1-201ENST00000329231 C16orf86Q6ZW13 317 aa33.1■■■□□ 2.89
ATPAF1-201ENST00000329231 EMILIN3Q9NT22 766 aa33.1■■■□□ 2.89
ATPAF1-201ENST00000329231 CTGFP29279 349 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 GUCY1A2P33402 732 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 CDK8P49336 464 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 RGS19P49795 217 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 SEPT2Q15019 361 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 SBK1Q52WX2 424 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms