RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CD209Q9NNX6 404 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 GGA1Q9UJY5 639 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 TNRC6CQ9HCJ0 1690 aaKnown RBP8.75□□□□□ -1.01
IFT88-201ENST00000319980 TSPY2A6NKD2 308 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 POLRMTO00411 1230 aaKnown RBP8.75□□□□□ -1.01
IFT88-201ENST00000319980 BBOX1O75936 387 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 PDE4BQ07343 736 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 TROAPQ12815 778 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 SH3RF3Q8TEJ3 882 aaPredicted RBP8.75□□□□□ -1.01
IFT88-201ENST00000319980 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 ZNF830Q96NB3 372 aaPredicted RBP8.75□□□□□ -1.01
IFT88-201ENST00000319980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.75□□□□□ -1.01
IFT88-201ENST00000319980 NID2Q14112 1375 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 TIAM2Q8IVF5 1701 aa8.75□□□□□ -1.01
IFT88-201ENST00000319980 C6orf229H3BNL8 230 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 ZNF202O95125 648 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 BAG3O95817 575 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 ATP2B4P23634 1241 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 NR5A1Q13285 461 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 PPP2R5BQ15173 497 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 MAP3K14Q99558 947 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 V9GY48 417 aaPredicted RBP8.74□□□□□ -1.01
IFT88-201ENST00000319980 TAF1LQ8IZX4 1826 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 ORC4O43929 436 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 PLEKHA8P1O95397 391 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 CMA1P23946 247 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 PTPAQ15257 358 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 SBK1Q52WX2 424 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 TMED8Q6PL24 325 aaPredicted RBP8.74□□□□□ -1.01
IFT88-201ENST00000319980 JMYQ8N9B5 988 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 TGFBRAP1Q8WUH2 860 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 CLIC6Q96NY7 704 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 RNF26Q9BY78 433 aaPredicted RBP8.74□□□□□ -1.01
IFT88-201ENST00000319980 POLLQ9UGP5 575 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 C4AP0C0L4 1744 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 SPDYE4A6NLX3 237 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 PFKFB1P16118 471 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 GSTO1P78417 241 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 STX1AQ16623 288 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 C11orf57Q6ZUT1 292 aaPredicted RBP8.74□□□□□ -1.01
IFT88-201ENST00000319980 C15orf52Q6ZUT6 534 aaKnown RBP8.74□□□□□ -1.01
IFT88-201ENST00000319980 SPC24Q8NBT2 197 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 DYNLL2Q96FJ2 89 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 NOL10Q9BSC4 688 aaKnown RBP8.74□□□□□ -1.01
IFT88-201ENST00000319980 TTC12Q9H892 705 aaPredicted RBP8.74□□□□□ -1.01
IFT88-201ENST00000319980 VPS54Q9P1Q0 977 aa8.74□□□□□ -1.01
IFT88-201ENST00000319980 MKRN1Q9UHC7 482 aaKnown RBP8.74□□□□□ -1.01
IFT88-201ENST00000319980 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.74□□□□□ -1.01
IFT88-201ENST00000319980 PPP6R2O75170 966 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 CAVIN2O95810 425 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 ATP2B1P20020 1258 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 HOXA10P31260 410 aaPredicted RBP8.73□□□□□ -1.01
IFT88-201ENST00000319980 MAPK8IP2Q13387 824 aaPredicted RBP8.73□□□□□ -1.01
IFT88-201ENST00000319980 MFSD14BQ5SR56 506 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 C12orf60Q5U649 245 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 TBC1D16Q8TBP0 767 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 OXER1Q8TDS5 423 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 FOXP1Q9H334 677 aaPredicted RBP8.73□□□□□ -1.01
IFT88-201ENST00000319980 A0A1B0GUL6 1792 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 GOLGA6L19H0YKK7 550 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 LDHCP07864 332 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 CALM1P0DP23 149 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 CALM2P0DP24 149 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 CALM3P0DP25 149 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 XBP1P17861 261 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 TOB1P50616 345 aaPredicted RBP8.73□□□□□ -1.01
IFT88-201ENST00000319980 TFAP4Q01664 338 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 FUT2Q10981 343 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 ZRSR1Q15695 479 aaKnown RBP8.73□□□□□ -1.01
IFT88-201ENST00000319980 PKN1Q16512 942 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 SHC4Q6S5L8 630 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 DEFB132Q7Z7B7 95 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 CTCFLQ8NI51 663 aaPredicted RBP8.73□□□□□ -1.01
IFT88-201ENST00000319980 TRIM5Q9C035 493 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 MKNK2Q9HBH9 465 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 CABP5Q9NP86 173 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.73□□□□□ -1.01
IFT88-201ENST00000319980 RBM28Q9NW13 759 aaKnown RBP8.73□□□□□ -1.01
IFT88-201ENST00000319980 ANO10Q9NW15 660 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 MROH7-TTC4A0A0A0MT08 1334 aa8.73□□□□□ -1.01
IFT88-201ENST00000319980 APBA3O96018 575 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 SYKP43405 635 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 ZNF827Q17R98 1081 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 RILPL1Q5EBL4 403 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 MAPKAPK5Q8IW41 473 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 AMOTL1Q8IY63 956 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 PIBF1Q8WXW3 757 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 CRAMP1Q96RY5 1269 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 KIAA1468Q9P260 1216 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 SAP30BPQ9UHR5 308 aaKnown RBP8.72□□□□□ -1.01
IFT88-201ENST00000319980 BECN2A8MW95 431 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 RIMBP2O15034 1052 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 PRPF3O43395 683 aaKnown RBP8.72□□□□□ -1.01
IFT88-201ENST00000319980 ZNF500O60304 480 aaPredicted RBP8.72□□□□□ -1.01
IFT88-201ENST00000319980 DDAH1O94760 285 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 IL1R1P14778 569 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 BTDP43251 543 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 PLCD1P51178 756 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 PPP4CP60510 307 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 SPECC1Q5M775 1068 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms