RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.44■■□□□ 1.82
CTSF-201ENST00000310325 DDR1Q08345 913 aa26.43■■□□□ 1.82
CTSF-201ENST00000310325 FUT2Q10981 343 aa26.43■■□□□ 1.82
CTSF-201ENST00000310325 MKRN1Q9UHC7 482 aaKnown RBP26.43■■□□□ 1.82
CTSF-201ENST00000310325 GGA1Q9UJY5 639 aa26.43■■□□□ 1.82
CTSF-201ENST00000310325 KIAA1468Q9P260 1216 aa26.43■■□□□ 1.82
CTSF-201ENST00000310325 LRRC37AA6NMS7 1700 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 GOLGA6L6A8MZA4 724 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 POLRMTO00411 1230 aaKnown RBP26.42■■□□□ 1.82
CTSF-201ENST00000310325 PRPF3O43395 683 aaKnown RBP26.42■■□□□ 1.82
CTSF-201ENST00000310325 CUTAO60888 179 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 OFD1O75665 1012 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 BBOX1O75936 387 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 XBP1P17861 261 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 HOXA10P31260 410 aaPredicted RBP26.42■■□□□ 1.82
CTSF-201ENST00000310325 USP5P45974 858 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 FAM47AQ5JRC9 791 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 ERCC4Q92889 916 aaPredicted RBP26.42■■□□□ 1.82
CTSF-201ENST00000310325 HPSEQ9Y251 543 aa26.42■■□□□ 1.82
CTSF-201ENST00000310325 GOLGA6L19H0YKK7 550 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 BAG3O95817 575 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 TPM3P06753 285 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 LDHCP07864 332 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 USP17L8P0C7I0 530 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 KIAA2012Q0VF49 1180 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 DIXDC1Q155Q3 683 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 GRIK5Q16478 980 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 RILPL1Q5EBL4 403 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 SHC4Q6S5L8 630 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.41■■□□□ 1.82
CTSF-201ENST00000310325 CEP57L1Q8IYX8 460 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 SH3RF3Q8TEJ3 882 aaPredicted RBP26.41■■□□□ 1.82
CTSF-201ENST00000310325 TIGD1Q96MW7 591 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 CD209Q9NNX6 404 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 FAM237AA0A1B0GTK4 181 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 PLEKHA8P1O95397 391 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 PPP4CP60510 307 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 PKN1Q16512 942 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 C12orf60Q5U649 245 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 PLA2G4DQ86XP0 818 aa26.41■■□□□ 1.82
CTSF-201ENST00000310325 ZNF830Q96NB3 372 aaPredicted RBP26.41■■□□□ 1.82
CTSF-201ENST00000310325 NOL10Q9BSC4 688 aaKnown RBP26.41■■□□□ 1.82
CTSF-201ENST00000310325 TSPY2A6NKD2 308 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 NMT2O60551 498 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 IL1R1P14778 569 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 SYKP43405 635 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 NT5C2P49902 561 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 TOB1P50616 345 aaPredicted RBP26.4■■□□□ 1.82
CTSF-201ENST00000310325 ZNF75DP51815 510 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 TXNRD1Q16881 649 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 RESP18Q5W5W9 173 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 TMTC3Q6ZXV5 915 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 TRIM5Q9C035 493 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 TTC12Q9H892 705 aaPredicted RBP26.4■■□□□ 1.82
CTSF-201ENST00000310325 PODXL2Q9NZ53 605 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 CDK5RAP2Q96SN8 1893 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 ROBO3Q96MS0 1386 aa26.4■■□□□ 1.82
CTSF-201ENST00000310325 HMGB2P26583 209 aaKnown RBP26.39■■□□□ 1.82
CTSF-201ENST00000310325 NR5A1Q13285 461 aa26.39■■□□□ 1.82
CTSF-201ENST00000310325 SPC24Q8NBT2 197 aa26.39■■□□□ 1.82
CTSF-201ENST00000310325 NAP1L5Q96NT1 182 aaPredicted RBP26.39■■□□□ 1.82
CTSF-201ENST00000310325 CRAMP1Q96RY5 1269 aa26.39■■□□□ 1.82
CTSF-201ENST00000310325 EP400Q96L91 3159 aa26.39■■□□□ 1.82
CTSF-201ENST00000310325 LTBP1Q14766 1721 aa26.39■■□□□ 1.82
CTSF-201ENST00000310325 A0A087WWV3 80 aa26.39■■□□□ 1.81
CTSF-201ENST00000310325 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.39■■□□□ 1.81
CTSF-201ENST00000310325 CTCFLQ8NI51 663 aaPredicted RBP26.39■■□□□ 1.81
CTSF-201ENST00000310325 NAT10Q9H0A0 1025 aaKnown RBP26.39■■□□□ 1.81
CTSF-201ENST00000310325 KLRG2A4D1S0 409 aaPredicted RBP26.38■■□□□ 1.81
CTSF-201ENST00000310325 ZRSR1Q15695 479 aaKnown RBP26.38■■□□□ 1.81
CTSF-201ENST00000310325 OXER1Q8TDS5 423 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 CLIC6Q96NY7 704 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 BECN2A8MW95 431 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 CERS3Q8IU89 383 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 AMOTL1Q8IY63 956 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 PROM2Q8N271 834 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 KRI1Q8N9T8 703 aaKnown RBP26.38■■□□□ 1.81
CTSF-201ENST00000310325 SHISA4Q96DD7 197 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 PHF20Q9BVI0 1012 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 VPS54Q9P1Q0 977 aa26.38■■□□□ 1.81
CTSF-201ENST00000310325 V9GY48 417 aaPredicted RBP26.38■■□□□ 1.81
CTSF-201ENST00000310325 ANKRD31Q8N7Z5 1873 aa26.37■■□□□ 1.81
CTSF-201ENST00000310325 SLC4A8Q2Y0W8 1093 aa26.37■■□□□ 1.81
CTSF-201ENST00000310325 SARM1Q6SZW1 724 aa26.37■■□□□ 1.81
CTSF-201ENST00000310325 DHX40Q8IX18 779 aaKnown RBP26.37■■□□□ 1.81
CTSF-201ENST00000310325 RTFDC1Q9BY42 306 aaPredicted RBP26.37■■□□□ 1.81
CTSF-201ENST00000310325 CNTNAP5Q8WYK1 1306 aa26.37■■□□□ 1.81
CTSF-201ENST00000310325 TBC1D16Q8TBP0 767 aa26.36■■□□□ 1.81
CTSF-201ENST00000310325 POLLQ9UGP5 575 aa26.36■■□□□ 1.81
CTSF-201ENST00000310325 KRT2P35908 639 aa26.35■■□□□ 1.81
CTSF-201ENST00000310325 RBM6P78332 1123 aaKnown RBP26.35■■□□□ 1.81
CTSF-201ENST00000310325 RCSD1Q6JBY9 416 aa26.35■■□□□ 1.81
CTSF-201ENST00000310325 TMC4Q7Z404 712 aa26.35■■□□□ 1.81
CTSF-201ENST00000310325 TGFBRAP1Q8WUH2 860 aa26.35■■□□□ 1.81
CTSF-201ENST00000310325 hCG_1642624A0A1W2PR95 340 aa26.34■■□□□ 1.81
CTSF-201ENST00000310325 PIBF1Q8WXW3 757 aa26.34■■□□□ 1.81
CTSF-201ENST00000310325 CEP131Q9UPN4 1083 aa26.34■■□□□ 1.81
CTSF-201ENST00000310325 PCDHB6Q9Y5E3 794 aa26.34■■□□□ 1.81
CTSF-201ENST00000310325 DDX60LQ5H9U9 1706 aaKnown RBP26.34■■□□□ 1.81
CTSF-201ENST00000310325 CDC25BP30305 580 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms