RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CABLES1Q8TDN4 633 aa12.65□□□□□ -0.39
PTPN7-201ENST00000309017 ANKZF1Q9H8Y5 726 aa12.65□□□□□ -0.39
PTPN7-201ENST00000309017 TTF2Q9UNY4 1162 aaKnown RBP12.65□□□□□ -0.39
PTPN7-201ENST00000309017 CYP27B1O15528 508 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 ZNF18P17022 549 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 PTPREP23469 700 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 MORC3Q14149 939 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 TRIML1Q8N9V2 468 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 RASSF8Q8NHQ8 419 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 CTNND2Q9UQB3 1225 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 GPTP24298 496 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 WTAPQ15007 396 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.64□□□□□ -0.39
PTPN7-201ENST00000309017 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 LAMA4Q16363 1823 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 XBP1P17861 261 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 CAPZA3Q96KX2 299 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
PTPN7-201ENST00000309017 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-201ENST00000309017 NFAT5O94916 1531 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 MYH15Q9Y2K3 1946 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 A0A1B0GTH6 734 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 MFAP3LO75121 409 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 MMP1P03956 469 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 ERCC5P28715 1186 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-201ENST00000309017 MCAMP43121 646 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-201ENST00000309017 RRAGBQ5VZM2 374 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 NCAPH2Q6IBW4 605 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 FBXO2Q9UK22 296 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-201ENST00000309017 ADD2P35612 726 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-201ENST00000309017 FAM204AQ9H8W3 233 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 PSD3Q9NYI0 1048 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 hCG_1642624A0A1W2PR95 340 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 EPSTI1Q96J88 318 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 UBAC1Q9BSL1 405 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 LY9Q9HBG7 655 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 TAB2Q9NYJ8 693 aa12.63□□□□□ -0.39
PTPN7-201ENST00000309017 WDR19Q8NEZ3 1342 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 MAP2K7O14733 419 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 IPO7O95373 1038 aaKnown RBP12.62□□□□□ -0.39
PTPN7-201ENST00000309017 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-201ENST00000309017 KRT9P35527 623 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-201ENST00000309017 MAPK8IP1Q9UQF2 711 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 CCDC196A0A1B0GTZ2 297 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 ENC1O14682 589 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 MBD4O95243 580 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 CDC25AP30304 524 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-201ENST00000309017 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-201ENST00000309017 FAM71BQ8TC56 605 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 MYO6Q9UM54 1294 aa12.62□□□□□ -0.39
PTPN7-201ENST00000309017 PDE6AP16499 860 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 TOB1P50616 345 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-201ENST00000309017 FXR1P51114 621 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTPN7-201ENST00000309017 TUBB4BP68371 445 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 WHAMMP3Q1A5X7 153 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 CTR9Q6PD62 1173 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 FOXR1Q6PIV2 292 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 KIF6Q6ZMV9 814 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-201ENST00000309017 BLZF1Q9H2G9 400 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 L1RE1Q9UN81 338 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 FAM237AA0A1B0GTK4 181 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 DEXIO95424 95 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 GTF2A1P52655 376 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-201ENST00000309017 NTRK3Q16288 839 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 MAP9Q49MG5 647 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 KIAA1328Q86T90 577 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 NOA1Q8NC60 698 aaKnown RBP12.61□□□□□ -0.39
PTPN7-201ENST00000309017 IGDCC4Q8TDY8 1250 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 ARMT1Q9H993 441 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 PIH1D3Q9NQM4 214 aaKnown RBP12.61□□□□□ -0.39
PTPN7-201ENST00000309017 MINDY4BA8MYZ0 360 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 IFNAR1P17181 557 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 MAGEB6Q8N7X4 407 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 AFAP1L1Q8TED9 768 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 HNRNPLLQ8WVV9 542 aaKnown RBP12.61□□□□□ -0.39
PTPN7-201ENST00000309017 NACAP1Q9BZK3 213 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 ATG3Q9NT62 314 aa12.61□□□□□ -0.39
PTPN7-201ENST00000309017 SRPRBQ9Y5M8 271 aaKnown RBP12.61□□□□□ -0.39
PTPN7-201ENST00000309017 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms