RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 FSIP1Q8NA03 581 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 BRIP1Q9BX63 1249 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 NCOA5Q9HCD5 579 aaKnown RBP11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 AATFQ9NY61 560 aaKnown RBP eCLIP11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 LEMD3Q9Y2U8 911 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 TACC3Q9Y6A5 838 aa11.86□□□□□ -0.51
APOBEC3F-201ENST00000308521 MAGEB6P1A0A0J9YX57 407 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 MINDY4BA8MYZ0 360 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 BBOX1O75936 387 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 CEBPZQ03701 1054 aaKnown RBP11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 EVX2Q03828 476 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 RRP12Q5JTH9 1297 aaKnown RBP11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 FBXO38Q6PIJ6 1188 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 FMR1NBQ8N0W7 255 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 AOPEPQ8N6M6 819 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 NSUN4Q96CB9 384 aaKnown RBP11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 TOMM22Q9NS69 142 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 GGA1Q9UJY5 639 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 A0A1B0GUL6 1792 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 CYP2D7A0A087X1C5 515 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 B4E1Z4 1266 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 CHRNA5P30532 468 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 FOSBP53539 338 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 ADALQ6DHV7 355 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 RALYLQ86SE5 291 aaKnown RBP11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 FLAD1Q8NFF5 587 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 TBC1D16Q8TBP0 767 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 MRPS27Q92552 414 aaKnown RBP11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 RTEL1Q9NZ71 1219 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 TAOK2Q9UL54 1235 aa11.85□□□□□ -0.51
APOBEC3F-201ENST00000308521 PRC1O43663 620 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 H2AFXP16104 143 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 ANTXR2P58335 489 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 DIXDC1Q155Q3 683 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 ELF2Q15723 593 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 CCDC93Q567U6 631 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 RASSF4Q9H2L5 321 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 TRMT1Q9NXH9 659 aaKnown RBP11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 NEDD4P46934 1319 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 KLRG2A4D1S0 409 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 E4F1Q66K89 784 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 CYB5R4Q7L1T6 521 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 NCOA7Q8NI08 942 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 CRAMP1Q96RY5 1269 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 MYCBPQ99417 103 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 SENP2Q9HC62 589 aa11.84□□□□□ -0.51
APOBEC3F-201ENST00000308521 NOP2P46087 812 aaKnown RBP11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 ME1P48163 572 aa11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 SF3B2Q13435 895 aaKnown RBP11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 BMS1Q14692 1282 aaKnown RBP11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 MB21D2Q8IYB1 491 aaPredicted RBP11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 FBXL16Q8N461 479 aa11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 FBXW7Q969H0 707 aa11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 ZKSCAN3Q9BRR0 538 aa11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 RIOK1Q9BRS2 568 aaKnown RBP11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 CD209Q9NNX6 404 aa11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 PCDHA7Q9UN72 937 aa11.83□□□□□ -0.51
APOBEC3F-201ENST00000308521 RXRAP19793 462 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 TRDNQ13061 729 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 CEP120Q8N960 986 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 PPP1R13BQ96KQ4 1090 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 CCP110O43303 1012 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 NRDCO43847 1150 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 DZIP1Q86YF9 867 aaKnown RBP11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 TXLNBQ8N3L3 684 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 NCAPGQ9BPX3 1015 aa11.83□□□□□ -0.52
APOBEC3F-201ENST00000308521 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 MYH13Q9UKX3 1938 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 SEMA3EO15041 775 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 NPR1P16066 1061 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 ATP2B4P23634 1241 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 PDIA3P30101 505 aaKnown RBP11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 PDE6BP35913 854 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 TPM4P67936 248 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 PRDM1O75626 825 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 EVCP57679 992 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 ARMCX5Q6P1M9 558 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 KCNG4Q8TDN1 519 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 SDF4Q9BRK5 362 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 MXD3Q9BW11 206 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 NACAP1Q9BZK3 213 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 ZNF446Q9NWS9 450 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 V9GYY5 206 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3F-201ENST00000308521 DOCK2Q92608 1830 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 KLF18A0A0U1RQI7 1052 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms