RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 GAS7O60861 476 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 PLCD1P51178 756 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 IQUBQ8NA54 791 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 ZSCAN10Q96SZ4 725 aaPredicted RBP12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 TBC1D10BQ4KMP7 808 aaPredicted RBP12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 BEND3Q5T5X7 828 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 TPH2Q8IWU9 490 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 GOLGA1Q92805 767 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 DNM3Q9UQ16 869 aa12.04□□□□□ -0.48
SYNPO2-201ENST00000307142 SEMA3EO15041 775 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 AKR1B10O60218 316 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 USP14P54578 494 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 TXNRD1Q16881 649 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 AOX1Q06278 1338 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 CRB1P82279 1406 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 TMEM232C9JQI7 657 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 NR1I2O75469 434 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 IFFO1Q0D2I5 559 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 SUSD4Q5VX71 490 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 TBC1D9BQ66K14 1250 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 FBXO11Q86XK2 927 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 DYDC1Q8WWB3 177 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 ATG3Q9NT62 314 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 SWAP70Q9UH65 585 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 PDE6AP16499 860 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 IGBP1P78318 339 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 NONOQ15233 471 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 KRT25Q7Z3Z0 450 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 TRMT1Q9NXH9 659 aaKnown RBP12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 SMCO2A6NFE2 343 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 ZEB2O60315 1214 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 GDF11O95390 407 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 KRT19P08727 400 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 NEK11Q8NG66 645 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 FAM193BQ96PV7 902 aaPredicted RBP12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 PLA2R1Q13018 1463 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 CALUO43852 315 aaPredicted RBP12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 STX17P56962 302 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
SYNPO2-201ENST00000307142 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 REXO1Q8N1G1 1221 aaKnown RBP12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 PLVAPQ9BX97 442 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 JADE2Q9NQC1 790 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 KCNQ2O43526 872 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 EIF3JO75822 258 aaKnown RBP12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 CSPG5O95196 566 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 MIER3Q7Z3K6 550 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 CCDC50Q8IVM0 306 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 TSNARE1Q96NA8 513 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 USP44Q9H0E7 712 aa12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 BCCIPQ9P287 314 aaKnown RBP eCLIP12.02□□□□□ -0.48
SYNPO2-201ENST00000307142 COL15A1P39059 1388 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 PTGS1P23219 599 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 RAD51AP2Q09MP3 1159 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 PALD1Q9ULE6 856 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 H0YHG0 523 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 GOLGA8HP0CJ92 632 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 CMTR1Q8N1G2 835 aaKnown RBP12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 SNX29Q8TEQ0 813 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 TSPYL1Q9H0U9 437 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 E7EWF7 191 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 UBXN1Q04323 297 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 RAPGEF1Q13905 1077 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 ANO6Q4KMQ2 910 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 TTC38Q5R3I4 469 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 ANO3Q9BYT9 981 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 TBC1D7Q9P0N9 293 aa12.02□□□□□ -0.49
SYNPO2-201ENST00000307142 SPATA31E1Q6ZUB1 1445 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 TRAF5O00463 557 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 FAM102BQ5T8I3 360 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 MAK16Q9BXY0 300 aaKnown RBP12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 VPS54Q9P1Q0 977 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 GCNT3O95395 438 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 KRT9P35527 623 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 FAM200AQ8TCP9 573 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 USP17L8P0C7I0 530 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 SEPT14Q6ZU15 432 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 USP25Q9UHP3 1055 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 HLTFQ14527 1009 aaKnown RBP eCLIP12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 MRPL44Q9H9J2 332 aaKnown RBP12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 PRPF6O94906 941 aaKnown RBP12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 GSDMDP57764 484 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 POLA2Q14181 598 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 HLFQ16534 295 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 ARHGAP31Q2M1Z3 1444 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
SYNPO2-201ENST00000307142 STX10O60499 249 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms