RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 PKD2L1Q9P0L9 805 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 A0A0D9SFI3 127 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 ALDH3A1P30838 453 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 WWC3Q9ULE0 1092 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 CD2BP2O95400 341 aaKnown RBP18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 GCKRQ14397 625 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 VCXQ9H320 206 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 CETN3O15182 167 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 HOXB7P09629 217 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 ATP2A2P16615 1042 aaKnown RBP18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 ZAP70P43403 619 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 TSNAXIP1Q2TAA8 658 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 MCTP2Q6DN12 878 aa18.32■□□□□ 0.52
SH3RF1-201ENST00000284637 MRPL12P52815 198 aaKnown RBP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 GNGT1P63211 74 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 SP4Q02446 784 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 NEDD9Q14511 834 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 TPTE2Q6XPS3 522 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 USP44Q9H0E7 712 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 FAM207AQ9NSI2 230 aaPredicted RBP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 ITSN2Q9NZM3 1697 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 IRX5P78411 483 aaPredicted RBP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 SEPT6Q14141 434 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 PPP2R5AQ15172 486 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 UIMC1Q96RL1 719 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 PDE11AQ9HCR9 933 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 VPS54Q9P1Q0 977 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 KRT5P13647 590 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 EIF6P56537 245 aaKnown RBP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 NCBP1Q09161 790 aaKnown RBP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 PAK2Q13177 524 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 PUM3Q15397 648 aaKnown RBP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 RPGRIP1Q96KN7 1286 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 TBC1D7Q9P0N9 293 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 TXNDC16Q9P2K2 825 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 ARID4AP29374 1257 aaPredicted RBP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 ZNF827Q17R98 1081 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 RUFY4Q6ZNE9 571 aa18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 YTHDC2Q9H6S0 1430 aaKnown RBP18.31■□□□□ 0.52
SH3RF1-201ENST00000284637 MAGEA9P43362 315 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 TYW1BQ6NUM6 668 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 PPP1R12CQ9BZL4 782 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 NRBP1Q9UHY1 535 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 SAR1BQ9Y6B6 198 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 STMN2Q93045 179 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 TAF5LO75529 589 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 PSMC4P43686 418 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 INF2Q27J81 1249 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 CACNA2D3Q8IZS8 1091 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 PDLIM2Q96JY6 352 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 DENND2AQ9ULE3 1009 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 CHMP2AO43633 222 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 RAD51AP2Q09MP3 1159 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 CFAP221Q4G0U5 840 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 HERC4Q5GLZ8 1057 aaPredicted RBP18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 LRWD1Q9UFC0 647 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 PPP2R2CQ9Y2T4 447 aa18.3■□□□□ 0.52
SH3RF1-201ENST00000284637 PPFIA4O75335 1185 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 FAM170AA1A519 330 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 GBP1P32455 592 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 PEX19P40855 299 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 CCDC38Q502W7 563 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 FCHSD1Q86WN1 690 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 ZNF354CQ86Y25 554 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 CAPS2Q9BXY5 557 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 IFIH1Q9BYX4 1025 aaKnown RBP18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 NLRC4Q9NPP4 1024 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 SPTLC3Q9NUV7 552 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 E7EVH7 732 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 A1BGP04217 495 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 ATP5DP30049 168 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 KLHL30Q0D2K2 578 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 WHAMMP3Q1A5X7 153 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 FBXO38Q6PIJ6 1188 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 RIMBP2O15034 1052 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 ATP5JP18859 108 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 NELFCDQ8IXH7 590 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 TEX11Q8IYF3 940 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 ZSWIM6Q9HCJ5 1215 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 BIRC3Q13489 604 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 MMS22LQ6ZRQ5 1243 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 EAF2Q96CJ1 260 aaPredicted RBP18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 FANCLQ9NW38 375 aa18.29■□□□□ 0.52
SH3RF1-201ENST00000284637 CCT5P48643 541 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 RRAGAQ7L523 313 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 DSCC1Q9BVC3 393 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 ZNF365Q70YC5 407 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms