RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 C21orf2O43822 256 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 SCP2P22307 547 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 CASP7P55210 303 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 WHAMMP3Q1A5X7 153 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 PLBD2Q8NHP8 589 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 CABS1Q96KC9 395 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 KAT14Q9H8E8 782 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 NCOA5Q9HCD5 579 aaKnown RBP14.87□□□□□ -0.03
NUP54-201ENST00000264883 DDX60Q8IY21 1712 aaKnown RBP14.87□□□□□ -0.03
NUP54-201ENST00000264883 MAST3O60307 1309 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 SPATA31A1Q5TZJ5 1347 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 TNS2Q63HR2 1409 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 KCPQ6ZWJ8 1503 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 A0A087WZG4 1122 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 SOWAHDA6NJG2 315 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 TFRCP02786 760 aaKnown RBP14.87□□□□□ -0.03
NUP54-201ENST00000264883 IRAK1P51617 712 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 IMMTQ16891 758 aaKnown RBP14.87□□□□□ -0.03
NUP54-201ENST00000264883 HSP90AA4PQ58FG1 418 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 ANO1Q5XXA6 986 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 HPCAL4Q9UM19 191 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 ADGRG1Q9Y653 693 aa14.87□□□□□ -0.03
NUP54-201ENST00000264883 ABCC12Q96J65 1359 aa14.86□□□□□ -0.03
NUP54-201ENST00000264883 LRP6O75581 1613 aa14.86□□□□□ -0.03
NUP54-201ENST00000264883 SHTN1A0MZ66 631 aa14.86□□□□□ -0.03
NUP54-201ENST00000264883 CIAO1O76071 339 aa14.86□□□□□ -0.03
NUP54-201ENST00000264883 POLR3DP05423 398 aaPredicted RBP14.86□□□□□ -0.03
NUP54-201ENST00000264883 LRCH2Q5VUJ6 765 aa14.86□□□□□ -0.03
NUP54-201ENST00000264883 CPLX2Q6PUV4 134 aaKnown RBP14.86□□□□□ -0.03
NUP54-201ENST00000264883 EGFL6Q8IUX8 553 aa14.86□□□□□ -0.03
NUP54-201ENST00000264883 ELOA2Q8IYF1 753 aaPredicted RBP14.86□□□□□ -0.03
NUP54-201ENST00000264883 NOA1Q8NC60 698 aaKnown RBP14.86□□□□□ -0.03
NUP54-201ENST00000264883 FAM76AQ8TAV0 307 aa14.86□□□□□ -0.03
NUP54-201ENST00000264883 FBXO41Q8TF61 875 aa14.86□□□□□ -0.03
NUP54-201ENST00000264883 A0A0U1RQJ8 604 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 FAM237AA0A1B0GTK4 181 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 PATL2C9JE40 543 aaKnown RBP14.85□□□□□ -0.03
NUP54-201ENST00000264883 PPP6R2O75170 966 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 GPTP24298 496 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 DDR1Q08345 913 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 ATRIPQ8WXE1 791 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 RIN2Q8WYP3 895 aaPredicted RBP14.85□□□□□ -0.03
NUP54-201ENST00000264883 CAPN7Q9Y6W3 813 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 PPP1R12AO14974 1030 aaPredicted RBP14.85□□□□□ -0.03
NUP54-201ENST00000264883 SYKP43405 635 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 PNOCQ13519 176 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 STIM1Q13586 685 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 NEDD9Q14511 834 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 SLC39A14Q15043 492 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 PPP2R5AQ15172 486 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 MAP9Q49MG5 647 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 SLC35F6Q8N357 371 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 BCAS4Q8TDM0 211 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 THRAP3Q9Y2W1 955 aaKnown RBP14.85□□□□□ -0.03
NUP54-201ENST00000264883 NDUFB9Q9Y6M9 179 aa14.85□□□□□ -0.03
NUP54-201ENST00000264883 H7C1W4 665 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 IFIT1P09914 478 aaKnown RBP14.84□□□□□ -0.03
NUP54-201ENST00000264883 RDXP35241 583 aaKnown RBP14.84□□□□□ -0.03
NUP54-201ENST00000264883 LMBR1LQ6UX01 489 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 RAD9BQ6WBX8 426 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 CCDC148Q8NFR7 591 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 NAPGQ99747 312 aaPredicted RBP14.84□□□□□ -0.03
NUP54-201ENST00000264883 AKR1B15C9JRZ8 316 aaPredicted RBP14.84□□□□□ -0.03
NUP54-201ENST00000264883 H0YHG0 523 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 CPLX1O14810 134 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 CDKL5O76039 1030 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 ELF1P32519 619 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 AKAP17AQ02040 695 aaKnown RBP14.84□□□□□ -0.03
NUP54-201ENST00000264883 ATG9AQ7Z3C6 839 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 NEUROD6Q96NK8 337 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 PANX2Q96RD6 677 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 CDCA7Q9BWT1 371 aaPredicted RBP14.84□□□□□ -0.03
NUP54-201ENST00000264883 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 ITGB4P16144 1822 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 SPATA31A5Q5VU36 1347 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 MAP3K15Q6ZN16 1313 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 SPATA31A7Q8IWB4 1347 aa14.84□□□□□ -0.03
NUP54-201ENST00000264883 MCM3P25205 808 aa14.83□□□□□ -0.03
NUP54-201ENST00000264883 GGCXP38435 758 aa14.83□□□□□ -0.03
NUP54-201ENST00000264883 FOXO4P98177 505 aa14.83□□□□□ -0.03
NUP54-201ENST00000264883 KIF23Q02241 960 aaPredicted RBP14.83□□□□□ -0.03
NUP54-201ENST00000264883 HSP90AB3PQ58FF7 597 aa14.83□□□□□ -0.03
NUP54-201ENST00000264883 NCOA7Q8NI08 942 aa14.83□□□□□ -0.03
NUP54-201ENST00000264883 MIEF2Q96C03 454 aa14.83□□□□□ -0.03
NUP54-201ENST00000264883 HPSEQ9Y251 543 aa14.83□□□□□ -0.03
NUP54-201ENST00000264883 ZC3H4Q9UPT8 1303 aaKnown RBP14.83□□□□□ -0.04
NUP54-201ENST00000264883 GOLGA6CA6NDK9 693 aa14.83□□□□□ -0.04
NUP54-201ENST00000264883 GOLGA8BA8MQT2 603 aa14.83□□□□□ -0.04
NUP54-201ENST00000264883 GOLGA6DP0CG33 693 aa14.83□□□□□ -0.04
NUP54-201ENST00000264883 PPFIA1Q13136 1202 aa14.83□□□□□ -0.04
NUP54-201ENST00000264883 OTUD7BQ6GQQ9 843 aa14.83□□□□□ -0.04
NUP54-201ENST00000264883 COG1Q8WTW3 980 aa14.83□□□□□ -0.04
NUP54-201ENST00000264883 NAA15Q9BXJ9 866 aaKnown RBP14.83□□□□□ -0.04
NUP54-201ENST00000264883 GOLGA6AQ9NYA3 693 aa14.83□□□□□ -0.04
NUP54-201ENST00000264883 MCM8Q9UJA3 840 aa14.83□□□□□ -0.04
NUP54-201ENST00000264883 KLF18A0A0U1RQI7 1052 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 MYO1FO00160 1098 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 PRC1O43663 620 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms