RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 GAS2L3Q86XJ1 694 aa18.25■□□□□ 0.51
FOXRED1-201ENST00000263578 TTLL6Q8N841 843 aa18.25■□□□□ 0.51
FOXRED1-201ENST00000263578 ZNF396Q96N95 335 aaPredicted RBP18.25■□□□□ 0.51
FOXRED1-201ENST00000263578 ZNF287Q9HBT7 754 aa18.25■□□□□ 0.51
FOXRED1-201ENST00000263578 NMT2O60551 498 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 AOC3Q16853 763 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 GRIPAP1Q4V328 841 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 BRAPQ7Z569 592 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 TEKT1Q969V4 418 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 GJB4Q9NTQ9 266 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 PSME4Q14997 1843 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 C21orf2O43822 256 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 SCNN1DP51172 638 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 TFAP4Q01664 338 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 TRIM29Q14134 588 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 TPRNQ4KMQ1 711 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 C16orf86Q6ZW13 317 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 NBPF11Q86T75 865 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 KCNQ5Q9NR82 932 aa18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 RBM28Q9NW13 759 aaKnown RBP18.24■□□□□ 0.51
FOXRED1-201ENST00000263578 MRE11P49959 708 aa18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 TROAPQ12815 778 aa18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 CCDC93Q567U6 631 aa18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 DACT2Q5SW24 774 aa18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 KRT40Q6A162 431 aa18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 CRACR2BQ8N4Y2 399 aaPredicted RBP18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 SLC44A5Q8NCS7 719 aa18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 MYH8P13535 1937 aa18.23■□□□□ 0.51
FOXRED1-201ENST00000263578 USP17L3A6NCW0 530 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 USP17L4A6NCW7 530 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 CCDC183Q5T5S1 534 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 USP17L1Q7RTZ2 530 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 GRPEL1Q9HAV7 217 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 SYCE3A1L190 88 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 GOLGA6L4A6NEF3 574 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 DEXIO95424 95 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 TSPY3P0CV98 308 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 TSPY8P0CW00 308 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 RASA1P20936 1047 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 RCSD1Q6JBY9 416 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 ZNF444Q8N0Y2 327 aaPredicted RBP18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 USP28Q96RU2 1077 aa18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 RNF26Q9BY78 433 aaPredicted RBP18.22■□□□□ 0.51
FOXRED1-201ENST00000263578 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 WDHD1O75717 1129 aaPredicted RBP18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 DPEP1P16444 411 aa18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 CRKP46108 304 aa18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 CDK8P49336 464 aa18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 PICALMQ13492 652 aa18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 TCP11L1Q9NUJ3 509 aa18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 USP40Q9NVE5 1235 aa18.21■□□□□ 0.51
FOXRED1-201ENST00000263578 KIF28PB7ZC32 967 aa18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 UBE2Q2LH0YL09 131 aa18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 LRSAM1Q6UWE0 723 aa18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 RTKN2Q8IZC4 609 aa18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 CMTR1Q8N1G2 835 aaKnown RBP18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 CTCFLQ8NI51 663 aaPredicted RBP18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 FTOQ9C0B1 505 aaKnown RBP eCLIP18.21■□□□□ 0.52e-6■■■■■ 157.3
FOXRED1-201ENST00000263578 KAT14Q9H8E8 782 aa18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 IL17RBQ9NRM6 502 aa18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 RCOR1Q9UKL0 485 aa18.21■□□□□ 0.5
FOXRED1-201ENST00000263578 KCNA3P22001 575 aa18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 GUCY1A2P33402 732 aa18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 HDLBPQ00341 1268 aaKnown RBP18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 MYSM1Q5VVJ2 828 aa18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 APOBEC3HQ6NTF7 200 aaKnown RBP18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 CDC42EP5Q6NZY7 148 aa18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 KIAA0825Q8IV33 1275 aa18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 ANKS1AQ92625 1134 aa18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 ZDHHC15Q96MV8 337 aa18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 MRIQ9BWK5 157 aa18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
FOXRED1-201ENST00000263578 PLEKHA8P1O95397 391 aa18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 AKAP17AQ02040 695 aaKnown RBP18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 FUT2Q10981 343 aa18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 TMTC3Q6ZXV5 915 aa18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 PSMD1Q99460 953 aa18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 ZBTB7AO95365 584 aa18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 GNL2Q13823 731 aaKnown RBP18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 PGBD1Q96JS3 809 aa18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 RTEL1Q9NZ71 1219 aa18.19■□□□□ 0.5
FOXRED1-201ENST00000263578 PNMA1Q8ND90 353 aa18.18■□□□□ 0.5
FOXRED1-201ENST00000263578 PRPF3O43395 683 aaKnown RBP18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 LETM1O95202 739 aaPredicted RBP18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 MMP1P03956 469 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 KIF5BP33176 963 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 NEDD1Q8NHV4 660 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 BICD2Q8TD16 824 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 MAP3K14Q99558 947 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 CNTNAP5Q8WYK1 1306 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms