RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 DDX4Q9NQI0 724 aaKnown RBP13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 COL1A1P02452 1464 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZBTB22O15209 634 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 RPS6KB1P23443 525 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 PRELPP51888 382 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 TMEM179Q6ZVK1 233 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
TNFAIP3-201ENST00000237289 COL11A2P13942 1736 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-201ENST00000237289 LRP5O75197 1615 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-201ENST00000237289 H3BQV1 296 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 CALM1P0DP23 149 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 CALM2P0DP24 149 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 CALM3P0DP25 149 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 IFFO2Q5TF58 517 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 CCDC144CPQ8IYA2 1237 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZSCAN10Q96SZ4 725 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-201ENST00000237289 LARP6Q9BRS8 491 aaKnown RBP13□□□□□ -0.33
TNFAIP3-201ENST00000237289 GOPCQ9HD26 462 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 CPA1P15085 419 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 METAP2P50579 478 aaKnown RBP eCLIP13□□□□□ -0.33
TNFAIP3-201ENST00000237289 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 GNAQP50148 359 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 MAP3K9P80192 1104 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 RAB11FIP4Q86YS3 637 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 CCDC82Q8N4S0 544 aa13□□□□□ -0.33
TNFAIP3-201ENST00000237289 SEC63Q9UGP8 760 aaKnown RBP13□□□□□ -0.33
TNFAIP3-201ENST00000237289 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 TM6SF1Q9BZW5 370 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 TTLL1O95922 423 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 SLC1A4P43007 532 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 CCT2P78371 535 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 TBC1D10CQ8IV04 446 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 CDCA5Q96FF9 252 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 IL25Q9H293 177 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 GBA2Q9HCG7 927 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 SH2B1Q9NRF2 756 aaPredicted RBP12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 TNKSO95271 1327 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 EGFRP00533 1210 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZHX2Q9Y6X8 837 aa12.99□□□□□ -0.33
TNFAIP3-201ENST00000237289 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 C16orf86Q6ZW13 317 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZNF384Q8TF68 577 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 INCENPQ9NQS7 918 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 HUNKP57058 714 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 TOP1P11387 765 aaKnown RBP12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 USP14P54578 494 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 RTN1Q16799 776 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 TANGO6Q9C0B7 1094 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 EHD4Q9H223 541 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 ASTN2O75129 1339 aaPredicted RBP12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 CHD4Q14839 1912 aa12.98□□□□□ -0.33
TNFAIP3-201ENST00000237289 TRIM75PA6NK02 468 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 ZMYM6O95789 1325 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 ORC4O43929 436 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 SEPT2Q15019 361 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 LRRC47Q8N1G4 583 aaKnown RBP12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 ADCK5Q3MIX3 580 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 UBE2Q2LH0YL09 131 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 K7ELQ4 463 aaPredicted RBP12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 PABPC4Q13310 644 aaKnown RBP eCLIP12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 ELP3Q9H9T3 547 aa12.97□□□□□ -0.33
TNFAIP3-201ENST00000237289 AKR1B1P15121 316 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 FOSBP53539 338 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 AK2P54819 239 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 IRX3P78415 501 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 MCTP1Q6DN14 999 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 CCDC83Q8IWF9 413 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
TNFAIP3-201ENST00000237289 HIRAP54198 1017 aaPredicted RBP12.96□□□□□ -0.34
TNFAIP3-201ENST00000237289 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.34
TNFAIP3-201ENST00000237289 WASF1Q92558 559 aa12.96□□□□□ -0.34
TNFAIP3-201ENST00000237289 TTC14Q96N46 770 aa12.96□□□□□ -0.34
TNFAIP3-201ENST00000237289 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.34
TNFAIP3-201ENST00000237289 NEDD4P46934 1319 aa12.96□□□□□ -0.34
TNFAIP3-201ENST00000237289 ZNF157P51786 506 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms