RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 POLR3DP05423 398 aaPredicted RBP25.74■■□□□ 1.71
GCA-201ENST00000233612 MAP3K14Q99558 947 aa25.74■■□□□ 1.71
GCA-201ENST00000233612 U2AF2P26368 475 aaKnown RBP eCLIP25.73■■□□□ 1.713e-6■■■■□ 23.3
GCA-201ENST00000233612 PLCD1P51178 756 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 FUT2Q10981 343 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 FAM47AQ5JRC9 791 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 STRIP1Q5VSL9 837 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 RCSD1Q6JBY9 416 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 DEFB132Q7Z7B7 95 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 NUP133Q8WUM0 1156 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 AIFM3Q96NN9 605 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 POLR3EQ9NVU0 708 aa25.73■■□□□ 1.71
GCA-201ENST00000233612 MYH1P12882 1939 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 GOLGA6L4A6NEF3 574 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 G3V3G9 751 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 TFAP4Q01664 338 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 DCAF8Q5TAQ9 597 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 MYSM1Q5VVJ2 828 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 C16orf86Q6ZW13 317 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 SUPT20HQ8NEM7 779 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 MKNK2Q9HBH9 465 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 GJB4Q9NTQ9 266 aa25.72■■□□□ 1.71
GCA-201ENST00000233612 TTF2Q9UNY4 1162 aaKnown RBP25.72■■□□□ 1.71
GCA-201ENST00000233612 HDLBPQ00341 1268 aaKnown RBP25.71■■□□□ 1.71
GCA-201ENST00000233612 TRIM29Q14134 588 aa25.71■■□□□ 1.71
GCA-201ENST00000233612 DYNLL2Q96FJ2 89 aa25.71■■□□□ 1.71
GCA-201ENST00000233612 PRPF3O43395 683 aaKnown RBP25.71■■□□□ 1.71
GCA-201ENST00000233612 YEATS4O95619 227 aa25.71■■□□□ 1.71
GCA-201ENST00000233612 NASPP49321 788 aaPredicted RBP25.71■■□□□ 1.71
GCA-201ENST00000233612 CCDC125Q86Z20 511 aa25.71■■□□□ 1.71
GCA-201ENST00000233612 ZNF444Q8N0Y2 327 aaPredicted RBP25.71■■□□□ 1.71
GCA-201ENST00000233612 IL17RBQ9NRM6 502 aa25.71■■□□□ 1.71
GCA-201ENST00000233612 KIF28PB7ZC32 967 aa25.7■■□□□ 1.7
GCA-201ENST00000233612 PDGFDQ9GZP0 370 aaPredicted RBP25.7■■□□□ 1.7
GCA-201ENST00000233612 ZNF646O15015 1829 aaPredicted RBP25.7■■□□□ 1.7
GCA-201ENST00000233612 RASA1P20936 1047 aa25.69■■□□□ 1.7
GCA-201ENST00000233612 KIAA2012Q0VF49 1180 aa25.69■■□□□ 1.7
GCA-201ENST00000233612 NMT2O60551 498 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 GUCY1A2P33402 732 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 DACT2Q5SW24 774 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 LINC00301Q8NCQ3 95 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 MYH6P13533 1939 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 LIG1P18858 919 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 CDK8P49336 464 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 TMTC3Q6ZXV5 915 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 TEKT1Q969V4 418 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.68■■□□□ 1.7
GCA-201ENST00000233612 RBSNQ9H1K0 784 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 DBNDD1Q9H9R9 158 aa25.68■■□□□ 1.7
GCA-201ENST00000233612 DDX19AQ9NUU7 478 aaKnown RBP25.68■■□□□ 1.7
GCA-201ENST00000233612 SAP30BPQ9UHR5 308 aaKnown RBP25.68■■□□□ 1.7
GCA-201ENST00000233612 ECE2O60344 883 aa25.67■■□□□ 1.7
GCA-201ENST00000233612 MMP1P03956 469 aa25.67■■□□□ 1.7
GCA-201ENST00000233612 NOVP48745 357 aa25.67■■□□□ 1.7
GCA-201ENST00000233612 NEDD1Q8NHV4 660 aa25.67■■□□□ 1.7
GCA-201ENST00000233612 CTCFLQ8NI51 663 aaPredicted RBP25.67■■□□□ 1.7
GCA-201ENST00000233612 FBXW7Q969H0 707 aa25.67■■□□□ 1.7
GCA-201ENST00000233612 TSPY26PQ9H489 355 aa25.67■■□□□ 1.7
GCA-201ENST00000233612 KIF13BQ9NQT8 1826 aa25.66■■□□□ 1.7
GCA-201ENST00000233612 WDHD1O75717 1129 aaPredicted RBP25.66■■□□□ 1.7
GCA-201ENST00000233612 APOBEC3HQ6NTF7 200 aaKnown RBP25.66■■□□□ 1.7
GCA-201ENST00000233612 KCNG4Q8TDN1 519 aa25.66■■□□□ 1.7
GCA-201ENST00000233612 ZDHHC15Q96MV8 337 aa25.66■■□□□ 1.7
GCA-201ENST00000233612 FOXP1Q9H334 677 aaPredicted RBP25.66■■□□□ 1.7
GCA-201ENST00000233612 SCN9AQ15858 1988 aa25.66■■□□□ 1.7
GCA-201ENST00000233612 USP17L3A6NCW0 530 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 USP17L4A6NCW7 530 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 UBE2Q2LH0YL09 131 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 TSPY3P0CV98 308 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 TSPY8P0CW00 308 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 AKAP17AQ02040 695 aaKnown RBP25.65■■□□□ 1.7
GCA-201ENST00000233612 PKN1Q16512 942 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 ADALQ6DHV7 355 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 USP17L1Q7RTZ2 530 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 TTLL6Q8N841 843 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 MXD3Q9BW11 206 aa25.65■■□□□ 1.7
GCA-201ENST00000233612 FTOQ9C0B1 505 aaKnown RBP eCLIP25.65■■□□□ 1.7
GCA-201ENST00000233612 A0A1W2PQ27 194 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 A0A1W2PQ64 194 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 A0A1W2PQD8 194 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 CEBPZQ03701 1054 aaKnown RBP25.64■■□□□ 1.7
GCA-201ENST00000233612 GABPAQ06546 454 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 SAFBQ15424 915 aaKnown RBP eCLIP25.64■■□□□ 1.7
GCA-201ENST00000233612 ANO1Q5XXA6 986 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 RBM43Q6ZSC3 357 aaKnown RBP25.64■■□□□ 1.7
GCA-201ENST00000233612 FUCA2Q9BTY2 467 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 PANK2Q9BZ23 570 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 KAT14Q9H8E8 782 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 USP40Q9NVE5 1235 aa25.64■■□□□ 1.7
GCA-201ENST00000233612 F8W031 263 aaPredicted RBP25.64■■□□□ 1.69
GCA-201ENST00000233612 KIF5BP33176 963 aa25.64■■□□□ 1.69
GCA-201ENST00000233612 RTKN2Q8IZC4 609 aa25.64■■□□□ 1.69
GCA-201ENST00000233612 CMTR1Q8N1G2 835 aaKnown RBP25.64■■□□□ 1.69
GCA-201ENST00000233612 KCNQ5Q9NR82 932 aa25.64■■□□□ 1.69
GCA-201ENST00000233612 TAOK2Q9UL54 1235 aa25.64■■□□□ 1.69
GCA-201ENST00000233612 CLIC4Q9Y696 253 aa25.64■■□□□ 1.69
GCA-201ENST00000233612 NPM3O75607 178 aaKnown RBP25.63■■□□□ 1.69
GCA-201ENST00000233612 XBP1P17861 261 aa25.63■■□□□ 1.69
GCA-201ENST00000233612 KCNA3P22001 575 aa25.63■■□□□ 1.69
GCA-201ENST00000233612 CRKP46108 304 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms