RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 BBOX1O75936 387 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 ATP1A3P13637 1013 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 NLRP12P59046 1061 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 FOXR1Q6PIV2 292 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 C2CD5Q86YS7 1000 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 ANKRD18AQ8IVF6 992 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 DHX58Q96C10 678 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 WDR24Q96S15 920 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 PLEKHA4Q9H4M7 779 aa11.7□□□□□ -0.54
CHERP-201ENST00000198939 TUBGCP6Q96RT7 1819 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
CHERP-201ENST00000198939 PTPN21Q16825 1174 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 NAA16Q6N069 864 aaPredicted RBP11.69□□□□□ -0.54
CHERP-201ENST00000198939 FCHSD1Q86WN1 690 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 PCDHA7Q9UN72 937 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 MRFAP1Q9Y605 127 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 KLRG2A4D1S0 409 aaPredicted RBP11.69□□□□□ -0.54
CHERP-201ENST00000198939 CDR1P51861 262 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 NDUFA8P51970 172 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 KIF4BQ2VIQ3 1234 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 RHOXF2BP0C7M4 288 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 COL9A3Q14050 684 aaPredicted RBP11.69□□□□□ -0.54
CHERP-201ENST00000198939 EFCAB13Q8IY85 973 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 CEP112Q8N8E3 955 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 ENGASEQ8NFI3 743 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 RHOXF2Q9BQY4 288 aa11.69□□□□□ -0.54
CHERP-201ENST00000198939 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 PTPDC1A2A3K4 754 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 ITGA6P23229 1130 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 HSP90AA4PQ58FG1 418 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 ADALQ6DHV7 355 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 MCTP2Q6DN12 878 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 MMS22LQ6ZRQ5 1243 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 VWA3AA6NCI4 1184 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
CHERP-201ENST00000198939 HOXA10P31260 410 aaPredicted RBP11.68□□□□□ -0.54
CHERP-201ENST00000198939 MAP2K2P36507 400 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 CORO7P57737 925 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
CHERP-201ENST00000198939 KIF5CO60282 957 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 CRY2Q49AN0 593 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 SOGA3Q5TF21 947 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 CC2D2BQ6DHV5 1058 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 PLCD4Q9BRC7 762 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 PDGFDQ9GZP0 370 aaPredicted RBP11.68□□□□□ -0.54
CHERP-201ENST00000198939 TAF6LQ9Y6J9 622 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 COL24A1Q17RW2 1714 aa11.68□□□□□ -0.54
CHERP-201ENST00000198939 MYL5Q02045 173 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 RSRC2Q7L4I2 434 aaKnown RBP11.67□□□□□ -0.54
CHERP-201ENST00000198939 FMR1NBQ8N0W7 255 aaPredicted RBP11.67□□□□□ -0.54
CHERP-201ENST00000198939 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.545e-7■□□□□ 11.1
CHERP-201ENST00000198939 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 LZTFL1Q9NQ48 299 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 CNNM1Q9NRU3 951 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 N4BP1O75113 896 aaKnown RBP11.67□□□□□ -0.54
CHERP-201ENST00000198939 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
CHERP-201ENST00000198939 GRAPQ13588 217 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 WWC2Q6AWC2 1192 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 GRAPLQ8TC17 118 aaPredicted RBP11.67□□□□□ -0.54
CHERP-201ENST00000198939 ANKRD2Q9GZV1 360 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 COPRSQ9NQ92 184 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 CASZ1Q86V15 1759 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 ZNF202O95125 648 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 SCRN1Q12765 414 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 FAM71BQ8TC56 605 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 KCNG4Q8TDN1 519 aa11.67□□□□□ -0.54
CHERP-201ENST00000198939 LLPHQ9BRT6 129 aaKnown RBP11.67□□□□□ -0.54
CHERP-201ENST00000198939 A0A087WUV0 522 aaPredicted RBP11.66□□□□□ -0.54
CHERP-201ENST00000198939 CIAO1O76071 339 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 IL15P40933 162 aaPredicted RBP11.66□□□□□ -0.54
CHERP-201ENST00000198939 LDHAL6AQ6ZMR3 332 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 TADA2BQ86TJ2 420 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 DESI2Q9BSY9 194 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 FAM204AQ9H8W3 233 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 ERLIN2O94905 339 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 SYNE4Q8N205 404 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
CHERP-201ENST00000198939 ABCC12Q96J65 1359 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 C10orf71Q711Q0 1435 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 SPTLC2O15270 562 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 CCDC172P0C7W6 258 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 ALDH8A1Q9H2A2 487 aaPredicted RBP11.66□□□□□ -0.54
CHERP-201ENST00000198939 PIM2Q9P1W9 311 aa11.66□□□□□ -0.54
CHERP-201ENST00000198939 MAP2K7O14733 419 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 PPFIA4O75335 1185 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 CCDC175P0C221 793 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 SRGNP10124 158 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 PTGER2P43116 358 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 CCDC70Q6NSX1 233 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 AFAP1L1Q8TED9 768 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 KAZALD1Q96I82 304 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms