RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Rbm28Q8CGC6 750 aaKnown RBP17.17■□□□□ 0.34
Trim11-203ENSMUST00000108810 Hps4Q99KG7 671 aa17.17■□□□□ 0.34
Trim11-203ENSMUST00000108810 Myh8P13542 1937 aa17.17■□□□□ 0.34
Trim11-203ENSMUST00000108810 Grem2O88273 168 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Stx8O88983 236 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Ankrd13aQ80UP5 588 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Mboat7Q8CHK3 473 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Gtf2iQ9ESZ8 998 aaKnown RBP17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Btaf1E9QAE3 1848 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Myo1bP46735 1107 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Chrna5Q2MKA5 467 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Pip5kl1Q6U7H8 395 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 DaglaQ6WQJ1 1044 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Trim11Q99PQ2 467 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Mad2l2Q9D752 211 aa17.16■□□□□ 0.34
Trim11-203ENSMUST00000108810 Grin1P35438 938 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 MyrflQ3UN70 904 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 Ddrgk1Q80WW9 315 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 Triml1Q8BVP1 470 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 OplahQ8K010 1288 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 ParnQ8VDG3 624 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 AllcQ9JHX6 414 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 Gpaa1Q9WTK3 621 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 Tm4sf1Q64302 202 aa17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 Dhx40Q6PE54 779 aaKnown RBP17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 Hic2Q9JLZ6 619 aaKnown RBP17.15■□□□□ 0.34
Trim11-203ENSMUST00000108810 Usp17lbE9Q9U0 468 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Epb41l2O70318 988 aaKnown RBP17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Oxsr1Q6P9R2 527 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Skor1Q8BX46 964 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Col23a1Q8K4G2 532 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ndufb9Q9CQJ8 179 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Cyp2ab1S4R196 498 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Atp8b5A3FIN4 1183 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Wnt7aP24383 349 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 EzrP26040 586 aaKnown RBP17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Terf1P70371 421 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Hvcn1Q3U2S8 269 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Prom2Q3UUY6 835 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Rc3h1Q4VGL6 1130 aaKnown RBP17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Mxd3Q80US8 206 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Lrrc15Q80X72 579 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Txnrd3Q99MD6 652 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Hmgn5Q9JL35 406 aa17.14■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ktn1Q61595 1327 aaKnown RBP17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Psme4Q5SSW2 1843 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Pfkfb3A7UAK5 555 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ppef2O35385 757 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Stag2O35638 1231 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 PnnO35691 725 aaKnown RBP17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Kmt5bQ3U8K7 883 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 MycbpapQ5SUV2 932 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Pdcl2Q78Y63 240 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Pnma3Q8JZW8 466 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Cdk8Q8R3L8 464 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Mrps25Q9D125 171 aaKnown RBP17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Lonrf3Q9D4H7 753 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Large1Q9Z1M7 756 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Phldb3E9QAF4 648 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 VrtnQ3SYK4 740 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Mindy4Q3UQI9 744 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Dnaaf2Q8BPI1 814 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Clip2Q9Z0H8 1047 aa17.13■□□□□ 0.33
Trim11-203ENSMUST00000108810 Dapk3O54784 448 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Mars2Q499X9 586 aaKnown RBP17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Rec8Q8C5S7 591 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Q8C6G1 249 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Zbed3Q9D0L1 228 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Itgb4A2A863 1818 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Cspp1B2RX88 1205 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Il7P10168 154 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Atp6v1aP50516 617 aaKnown RBP17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Prpf4bQ61136 1007 aaKnown RBP17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ehd2Q8BH64 543 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Q8BZJ8 459 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Tmem47Q9JJG6 181 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 GdaQ9R111 454 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Stxbp4Q9WV89 557 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Kcnh3Q9WVJ0 1095 aa17.12■□□□□ 0.33
Trim11-203ENSMUST00000108810 Gm43738A0A0G2JEA5 862 aa17.11■□□□□ 0.33
Trim11-203ENSMUST00000108810 Zscan29E9Q5B4 869 aa17.11■□□□□ 0.33
Trim11-203ENSMUST00000108810 Gm10134F6ZQC6 126 aa17.11■□□□□ 0.33
Trim11-203ENSMUST00000108810 Kifc2O08672 792 aa17.11■□□□□ 0.33
Trim11-203ENSMUST00000108810 Plekha7Q3UIL6 1118 aaKnown RBP17.11■□□□□ 0.33
Trim11-203ENSMUST00000108810 Znf653Q6YND2 615 aa17.11■□□□□ 0.33
Trim11-203ENSMUST00000108810 Olfr119Q7TRJ5 321 aa17.11■□□□□ 0.33
Trim11-203ENSMUST00000108810 Vnn1Q9Z0K8 512 aa17.11■□□□□ 0.33
Trim11-203ENSMUST00000108810 Fam186bD3Z420 943 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Eya3P97480 510 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 EgfrQ01279 1210 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Myo19Q5SV80 963 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Insm1Q63ZV0 521 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Kcnf1Q7TSH7 493 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Larp6Q8BN59 492 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ccdc150Q8CDI7 1110 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Clstn1Q9EPL2 979 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Col5a2Q3U962 1497 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Tpd52l1O54818 204 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 DSCC1Q14AI0 399 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Epha10Q8BYG9 1007 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 69.3 ms