RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Chtf8P0CG14 533 aa9.53□□□□□ -0.88
Upf1-202ENSMUST00000215817 6030445D17RikE9Q8F9 148 aa9.52□□□□□ -0.89
Upf1-202ENSMUST00000215817 Gm12216A0A1W2P827 62 aa9.52□□□□□ -0.89
Upf1-202ENSMUST00000215817 Defb1P56386 69 aa9.52□□□□□ -0.89
Upf1-202ENSMUST00000215817 Gm10320E9PW43 113 aa9.5□□□□□ -0.89
Upf1-202ENSMUST00000215817 Uqcr11Q9CPX8 56 aa9.44□□□□□ -0.9
Upf1-202ENSMUST00000215817 CubnQ9JLB4 3623 aa9.41□□□□□ -0.9
Upf1-202ENSMUST00000215817 LystP97412 3788 aa9.4□□□□□ -0.9
Upf1-202ENSMUST00000215817 Q8BGJ3 129 aa9.39□□□□□ -0.91
Upf1-202ENSMUST00000215817 Krtap29-1A2A5X4 342 aa9.39□□□□□ -0.91
Upf1-202ENSMUST00000215817 Mp68P56379 58 aa9.39□□□□□ -0.91
Upf1-202ENSMUST00000215817 Cypt15B1AXS0 87 aa9.35□□□□□ -0.91
Upf1-202ENSMUST00000215817 Cypt14J3QPF7 87 aa9.33□□□□□ -0.92
Upf1-202ENSMUST00000215817 Gm26620Q9CY65 116 aa9.32□□□□□ -0.92
Upf1-202ENSMUST00000215817 Gm3646F6S692 53 aa9.31□□□□□ -0.92
Upf1-202ENSMUST00000215817 Odf3bQ5M8M2 238 aa9.3□□□□□ -0.92
Upf1-202ENSMUST00000215817 Krtap14O08640 167 aa9.28□□□□□ -0.92
Upf1-202ENSMUST00000215817 Gm10139O88245 57 aa9.28□□□□□ -0.92
Upf1-202ENSMUST00000215817 4930507D05RikQ8C9C9 103 aa9.27□□□□□ -0.92
Upf1-202ENSMUST00000215817 1700042G07RikB1AUF7 90 aa9.27□□□□□ -0.93
Upf1-202ENSMUST00000215817 Gm17606F6ZL36 78 aa9.24□□□□□ -0.93
Upf1-202ENSMUST00000215817 Gm9821Q8K076 103 aa9.22□□□□□ -0.93
Upf1-202ENSMUST00000215817 Tnp2P11378 117 aa9.22□□□□□ -0.93
Upf1-202ENSMUST00000215817 BsnO88737 3942 aa9.19□□□□□ -0.94
Upf1-202ENSMUST00000215817 4933415A04RikQ9D443 101 aa9.18□□□□□ -0.94
Upf1-202ENSMUST00000215817 A730071L15RikQ8C4X0 137 aa9.17□□□□□ -0.94
Upf1-202ENSMUST00000215817 Xirp2Q4U4S6 3784 aa9.15□□□□□ -0.94
Upf1-202ENSMUST00000215817 Rnase13Q5GAM7 153 aa9.13□□□□□ -0.95
Upf1-202ENSMUST00000215817 Gm3880A0A1B0GSB3 72 aa9.1□□□□□ -0.95
Upf1-202ENSMUST00000215817 Gm21798J3QNU5 87 aa9.09□□□□□ -0.95
Upf1-202ENSMUST00000215817 Pla2g10Q9QXX3 151 aa9.08□□□□□ -0.96
Upf1-202ENSMUST00000215817 2310034C09RikQ9D746 214 aa9.05□□□□□ -0.96
Upf1-202ENSMUST00000215817 Krtap15-1Q9QZU5 150 aa9.04□□□□□ -0.96
Upf1-202ENSMUST00000215817 Gm16253D3Z167 63 aa9.01□□□□□ -0.97
Upf1-202ENSMUST00000215817 Gm9918Q8BUR5 174 aa9.01□□□□□ -0.97
Upf1-202ENSMUST00000215817 Dnah14A0A140LIJ4 4489 aa8.97□□□□□ -0.97
Upf1-202ENSMUST00000215817 CriptO70333 101 aa8.95□□□□□ -0.98
Upf1-202ENSMUST00000215817 Gm37013Q8K491 104 aa8.93□□□□□ -0.98
Upf1-202ENSMUST00000215817 Gm20538F6Z9R1 75 aa8.93□□□□□ -0.98
Upf1-202ENSMUST00000215817 Hspg2Q05793 3707 aaKnown RBP8.88□□□□□ -0.99
Upf1-202ENSMUST00000215817 Gm5767A0A0J9YTU8 78 aa8.83□□□□□ -1
Upf1-202ENSMUST00000215817 Dnah10D3YYQ8 4591 aa8.79□□□□□ -1
Upf1-202ENSMUST00000215817 Gm4491E0CX42 125 aa8.77□□□□□ -1.01
Upf1-202ENSMUST00000215817 Gm9955Q8CEJ8 102 aa8.7□□□□□ -1.02
Upf1-202ENSMUST00000215817 TnxbO35452 4006 aa8.69□□□□□ -1.02
Upf1-202ENSMUST00000215817 Gm5965D3Z724 196 aa8.69□□□□□ -1.02
Upf1-202ENSMUST00000215817 Sec61bQ9CQS8 96 aaKnown RBP8.69□□□□□ -1.02
Upf1-202ENSMUST00000215817 Huwe1Q7TMY8 4377 aaKnown RBP8.65□□□□□ -1.02
Upf1-202ENSMUST00000215817 Gm9736A0A1W2P7N1 277 aa8.57□□□□□ -1.04
Upf1-202ENSMUST00000215817 Fam229aB2KGE5 128 aa8.57□□□□□ -1.04
Upf1-202ENSMUST00000215817 Rps29P62274 56 aa8.56□□□□□ -1.04
Upf1-202ENSMUST00000215817 D6Ertd527eA0A0N4SWI3 464 aa8.56□□□□□ -1.04
Upf1-202ENSMUST00000215817 Romo1P60603 79 aa8.52□□□□□ -1.05
Upf1-202ENSMUST00000215817 Gm2310J3QNJ2 377 aa8.49□□□□□ -1.05
Upf1-202ENSMUST00000215817 2310057N15RikQ9D6T8 200 aa8.48□□□□□ -1.05
Upf1-202ENSMUST00000215817 Rpl37Q9D823 97 aa8.46□□□□□ -1.05
Upf1-202ENSMUST00000215817 Gm10382Q3V0T5 144 aa8.46□□□□□ -1.05
Upf1-202ENSMUST00000215817 Ryr1E9PZQ0 5035 aa8.42□□□□□ -1.06
Upf1-202ENSMUST00000215817 Ndufaf8A2AMZ4 74 aa8.42□□□□□ -1.06
Upf1-202ENSMUST00000215817 Csmd3Q80T79 3707 aa8.42□□□□□ -1.06
Upf1-202ENSMUST00000215817 Krtap19-5O08632 62 aa8.42□□□□□ -1.06
Upf1-202ENSMUST00000215817 Spink7Q6IE32 76 aa8.39□□□□□ -1.07
Upf1-202ENSMUST00000215817 PlecQ9QXS1 4691 aaKnown RBP8.36□□□□□ -1.07
Upf1-202ENSMUST00000215817 A930033H14RikG5E8X6 103 aa8.36□□□□□ -1.07
Upf1-202ENSMUST00000215817 Dnah7bL7N1Y0 4068 aa8.28□□□□□ -1.08
Upf1-202ENSMUST00000215817 Dnah17Q69Z23 4481 aa8.24□□□□□ -1.09
Upf1-202ENSMUST00000215817 Dnah5Q8VHE6 4621 aa8.23□□□□□ -1.09
Upf1-202ENSMUST00000215817 Dnah6E9Q0B6 4144 aa8.21□□□□□ -1.1
Upf1-202ENSMUST00000215817 PrkdcP97313 4128 aa8.21□□□□□ -1.1
Upf1-202ENSMUST00000215817 Ryr3A2AGL3 4863 aa8.2□□□□□ -1.1
Upf1-202ENSMUST00000215817 Vps13dB1ART2 4390 aa8.18□□□□□ -1.1
Upf1-202ENSMUST00000215817 Gm19426M0QWC7 77 aa8.17□□□□□ -1.1
Upf1-202ENSMUST00000215817 Gm9112A2AI92 75 aa8.16□□□□□ -1.1
Upf1-202ENSMUST00000215817 Cox6b2Q80ZN9 88 aa8.12□□□□□ -1.11
Upf1-202ENSMUST00000215817 Dnah9B1AR51 4484 aa8.11□□□□□ -1.11
Upf1-202ENSMUST00000215817 Kmt2aP55200 3966 aa8.1□□□□□ -1.11
Upf1-202ENSMUST00000215817 Dnah11E9Q7N9 4488 aa8.1□□□□□ -1.11
Upf1-202ENSMUST00000215817 Prm2P07978 107 aa8.09□□□□□ -1.11
Upf1-202ENSMUST00000215817 BC029722A0A0N4SW31 51 aa8.08□□□□□ -1.12
Upf1-202ENSMUST00000215817 Stard9Q80TF6 4561 aa8.08□□□□□ -1.12
Upf1-202ENSMUST00000215817 Camk2n1Q6QWF9 78 aa8.03□□□□□ -1.12
Upf1-202ENSMUST00000215817 Dync2h1Q45VK7 4306 aa8.01□□□□□ -1.13
Upf1-202ENSMUST00000215817 Gm21887J3QQ04 176 aa7.97□□□□□ -1.13
Upf1-202ENSMUST00000215817 Gm10318A0A1W2P728 225 aa7.96□□□□□ -1.14
Upf1-202ENSMUST00000215817 Gm20537G3UYK7 97 aa7.96□□□□□ -1.14
Upf1-202ENSMUST00000215817 Gm11939A2A592 99 aa7.95□□□□□ -1.14
Upf1-202ENSMUST00000215817 Crct1Q6PAI5 102 aa7.94□□□□□ -1.14
Upf1-202ENSMUST00000215817 Fras1Q80T14 4010 aa7.93□□□□□ -1.14
Upf1-202ENSMUST00000215817 Dync1h1Q9JHU4 4644 aaKnown RBP7.92□□□□□ -1.14
Upf1-202ENSMUST00000215817 Dnah3Q8BW94 4083 aa7.85□□□□□ -1.15
Upf1-202ENSMUST00000215817 ApobE9Q414 4505 aa7.84□□□□□ -1.15
Upf1-202ENSMUST00000215817 Mycbp2Q7TPH6 4711 aa7.83□□□□□ -1.16
Upf1-202ENSMUST00000215817 Gm18596A0A1W2P860 280 aa7.83□□□□□ -1.16
Upf1-202ENSMUST00000215817 Herc2Q4U2R1 4836 aa7.8□□□□□ -1.16
Upf1-202ENSMUST00000215817 Kiaa1109A2AAE1 5005 aa7.79□□□□□ -1.16
Upf1-202ENSMUST00000215817 Dnah1E9Q8T7 4250 aa7.78□□□□□ -1.16
Upf1-202ENSMUST00000215817 Lrp1bQ9JI18 4599 aa7.75□□□□□ -1.17
Upf1-202ENSMUST00000215817 Gm17416Q30KP4 66 aa7.73□□□□□ -1.17
Upf1-202ENSMUST00000215817 HydinQ80W93 5154 aa7.73□□□□□ -1.17
Upf1-202ENSMUST00000215817 2310079G19RikQ9D6L6 185 aa7.7□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms