RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Dnal4Q9DCM4 105 aa4.02□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Xlr5cQ9JJR2 179 aa4.02□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Gpr98Q8VHN7 6298 aaKnown RBP4.02□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Fam229aB2KGE5 128 aa4.01□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Rpl37Q9D823 97 aa4.01□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Rab37Q9JKM7 223 aa4.01□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Tmem243B2RVB9 118 aa4□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Vpreb3D3Z6J4 130 aa4□□□□□ -1.77
Scn8a-207ENSMUST00000200959 P01843 105 aa4□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Lce1a1Q9CQH5 143 aa4□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Trav3-4A0A075B654 114 aa3.99□□□□□ -1.77
Scn8a-207ENSMUST00000200959 MturnQ8CGA4 131 aa3.99□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Tac4Q99N14 128 aa3.99□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Rpl39lQ9CQD0 51 aa3.99□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Krtap20-2E9Q0A8 60 aa3.98□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Smim13E9Q942 88 aa3.98□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Hint1P70349 126 aaKnown RBP3.98□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Vmn1r197Q8R265 298 aa3.98□□□□□ -1.77
Scn8a-207ENSMUST00000200959 A0A286YE02 88 aa3.97□□□□□ -1.77
Scn8a-207ENSMUST00000200959 2300003K06RikA2A4M0 262 aa3.97□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Trav3-1Q5R1I8 114 aa3.97□□□□□ -1.77
Scn8a-207ENSMUST00000200959 G0s2Q61585 103 aa3.97□□□□□ -1.77
Scn8a-207ENSMUST00000200959 Igkv1-35A0A0G2JDE5 120 aa3.96□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Gm16381A0A1Y7VKT9 73 aa3.96□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Mtatp8P03930 67 aa3.96□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Defb47Q30KN1 79 aa3.96□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Gm6358A0A087WPH4 74 aa3.95□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Lamtor3O88653 124 aa3.95□□□□□ -1.78
Scn8a-207ENSMUST00000200959 BtcQ05928 177 aa3.95□□□□□ -1.78
Scn8a-207ENSMUST00000200959 CenpwQ3URR0 86 aa3.95□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Krtap4-7Q9D732 168 aa3.95□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Scgb1b2O35176 93 aa3.94□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Macf1Q9QXZ0 7354 aaKnown RBP3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Igkv2-109A0A075B5K6 120 aa3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Gm29423A0A087WRM1 55 aa3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Gm10401E9Q3K6 71 aa3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Gm26602M0QWA4 95 aa3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Sigmar1O55242 223 aa3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Cox7cP17665 63 aa3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 A830005F24RikQ8BRT5 167 aa3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 4930524J08RikQ9CUJ5 163 aa3.93□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Gm37389A0A0A6YW05 95 aa3.92□□□□□ -1.78
Scn8a-207ENSMUST00000200959 P06320 134 aa3.92□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Q8BT88 171 aa3.92□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Gm38119A0A0A6YX29 146 aa3.91□□□□□ -1.78
Scn8a-207ENSMUST00000200959 BatfO35284 125 aa3.91□□□□□ -1.78
Scn8a-207ENSMUST00000200959 A730071L15RikQ8C4X0 137 aa3.91□□□□□ -1.78
Scn8a-207ENSMUST00000200959 Gm16253D3Z167 63 aa3.9□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Gm10135F6TEE5 83 aa3.9□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Gm21886J3QJU9 214 aa3.9□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Spink13Q3UTS8 97 aa3.9□□□□□ -1.79
Scn8a-207ENSMUST00000200959 9530003J23RikQ8BM26 151 aa3.9□□□□□ -1.79
Scn8a-207ENSMUST00000200959 1700018G05RikA0A1B0GSI2 66 aa3.89□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Cox6a2P43023 97 aa3.89□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Chchd10Q7TNL9 138 aa3.89□□□□□ -1.79
Scn8a-207ENSMUST00000200959 4930535I16RikQ9CUI2 172 aa3.89□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Gm10308Q9CVR5 141 aa3.89□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Lce1bQ9D149 137 aa3.89□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Igkv8-28A0A0G2JE47 121 aa3.88□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Igkv3-4A0A140T8Q4 119 aa3.88□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Tmem213Q08EA8 116 aa3.88□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Krtap9-3Q3V2C1 136 aa3.88□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Anapc13Q8R034 74 aa3.88□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Gm26920S4R2A5 56 aa3.88□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Ifitm6A0A1B0GS75 124 aa3.87□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Cox6cQ9CPQ1 76 aa3.87□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Acyp1P56376 99 aa3.86□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Gm26620Q9CY65 116 aa3.86□□□□□ -1.79
Scn8a-207ENSMUST00000200959 1700020N15RikL7MTX3 112 aa3.85□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Sfta2E9PXB6 77 aa3.84□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Atp5eP56382 52 aa3.84□□□□□ -1.79
Scn8a-207ENSMUST00000200959 Ighv10-3A0A075B5T6 119 aa3.83□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Igkv8-27A0A0G2JF28 120 aa3.83□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Igkv8-30A0A140T8M3 121 aa3.83□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Gm12353A2AGJ4 60 aa3.83□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Gm28539A0A087WSL9 92 aa3.82□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Igkv8-21A0A140T8P7 120 aa3.82□□□□□ -1.8
Scn8a-207ENSMUST00000200959 NrepQ07475 68 aa3.82□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Lyrm7Q9DA03 104 aa3.82□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Sprr2jO70561 109 aa3.8□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Chtf8P0CG14 533 aa3.8□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Rbm3O89086 153 aaKnown RBP3.78□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Gm37013Q8K491 104 aa3.78□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Prr13Q9CQJ5 137 aa3.78□□□□□ -1.8
Scn8a-207ENSMUST00000200959 Gm44790A0A0N4SV91 103 aa3.77□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Krtap13-1Q8K198 168 aa3.77□□□□□ -1.81
Scn8a-207ENSMUST00000200959 2310046K23RikA0A0A6YVW6 87 aa3.76□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Smim20D3Z7Q2 69 aa3.76□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Cypt15B1AXS0 87 aa3.75□□□□□ -1.81
Scn8a-207ENSMUST00000200959 7530416G11RikJ3QJX6 159 aa3.75□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Sprr2gO70558 76 aa3.75□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Pla2g10Q9QXX3 151 aa3.75□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Krtap12-1Q9Z287 130 aa3.75□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Reg3aO09037 175 aa3.74□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Pde6gP09174 87 aa3.74□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Rnase13Q5GAM7 153 aa3.74□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Trav14d-3-dv8A0A075B619 120 aa3.73□□□□□ -1.81
Scn8a-207ENSMUST00000200959 C130032M10RikQ8C888 123 aa3.73□□□□□ -1.81
Scn8a-207ENSMUST00000200959 Mrpl34Q99N91 92 aa3.73□□□□□ -1.81
Scn8a-207ENSMUST00000200959 UqcrqQ9CQ69 82 aa3.73□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms