RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 SptssbQ925E8 76 aa4.59□□□□□ -1.68
Usp40-204ENSMUST00000187758 Igkv8-28A0A0G2JE47 121 aa4.58□□□□□ -1.68
Usp40-204ENSMUST00000187758 Coa5Q99M07 74 aa4.58□□□□□ -1.68
Usp40-204ENSMUST00000187758 Gm10643Q3URG9 111 aa4.57□□□□□ -1.68
Usp40-204ENSMUST00000187758 1700018G05RikA0A1B0GSI2 66 aa4.57□□□□□ -1.68
Usp40-204ENSMUST00000187758 Defb39Q70KL3 74 aa4.57□□□□□ -1.68
Usp40-204ENSMUST00000187758 Pkd1O08852 4293 aa4.57□□□□□ -1.68
Usp40-204ENSMUST00000187758 A730071L15RikQ8C4X0 137 aa4.56□□□□□ -1.68
Usp40-204ENSMUST00000187758 Dnah5Q8VHE6 4621 aa4.56□□□□□ -1.68
Usp40-204ENSMUST00000187758 Odf3bQ5M8M2 238 aa4.56□□□□□ -1.68
Usp40-204ENSMUST00000187758 Chchd10Q7TNL9 138 aa4.56□□□□□ -1.68
Usp40-204ENSMUST00000187758 Phxr4P15974 95 aa4.55□□□□□ -1.68
Usp40-204ENSMUST00000187758 A0A286YE49 62 aa4.55□□□□□ -1.68
Usp40-204ENSMUST00000187758 Ndufb1P0DN34 57 aa4.54□□□□□ -1.68
Usp40-204ENSMUST00000187758 Ryr3A2AGL3 4863 aa4.54□□□□□ -1.68
Usp40-204ENSMUST00000187758 Gm28230A0A0A0MQ91 144 aa4.54□□□□□ -1.68
Usp40-204ENSMUST00000187758 Mrpl34Q99N91 92 aa4.54□□□□□ -1.68
Usp40-204ENSMUST00000187758 Rpl37aP61514 92 aa4.53□□□□□ -1.68
Usp40-204ENSMUST00000187758 C130032M10RikQ8C888 123 aa4.53□□□□□ -1.68
Usp40-204ENSMUST00000187758 Anapc11Q9CPX9 84 aa4.53□□□□□ -1.68
Usp40-204ENSMUST00000187758 Dync1h1Q9JHU4 4644 aaKnown RBP4.53□□□□□ -1.68
Usp40-204ENSMUST00000187758 1700074P13RikQ9D9G7 251 aa4.53□□□□□ -1.68
Usp40-204ENSMUST00000187758 Igkv8-19A0A0G2JFN8 121 aa4.52□□□□□ -1.69
Usp40-204ENSMUST00000187758 Gm20604F8WIA3 75 aa4.52□□□□□ -1.69
Usp40-204ENSMUST00000187758 Igkv3-4A0A140T8Q4 119 aa4.52□□□□□ -1.69
Usp40-204ENSMUST00000187758 Cypt14J3QPF7 87 aa4.51□□□□□ -1.69
Usp40-204ENSMUST00000187758 4933415A04RikQ9D443 101 aa4.51□□□□□ -1.69
Usp40-204ENSMUST00000187758 RetnlbQ99P86 105 aa4.51□□□□□ -1.69
Usp40-204ENSMUST00000187758 Gm44790A0A0N4SV91 103 aa4.5□□□□□ -1.69
Usp40-204ENSMUST00000187758 ApobE9Q414 4505 aa4.48□□□□□ -1.69
Usp40-204ENSMUST00000187758 Ndufs5Q99LY9 106 aa4.48□□□□□ -1.69
Usp40-204ENSMUST00000187758 Ryr2E9Q401 4966 aaKnown RBP4.48□□□□□ -1.69
Usp40-204ENSMUST00000187758 Fat1A0A1L1SQU7 4645 aa4.48□□□□□ -1.69
Usp40-204ENSMUST00000187758 Gm21886J3QJU9 214 aa4.47□□□□□ -1.69
Usp40-204ENSMUST00000187758 1700042G07RikB1AUF7 90 aa4.46□□□□□ -1.69
Usp40-204ENSMUST00000187758 Gm10160F6Y577 67 aa4.46□□□□□ -1.69
Usp40-204ENSMUST00000187758 Stard9Q80TF6 4561 aa4.46□□□□□ -1.69
Usp40-204ENSMUST00000187758 Gm26620Q9CY65 116 aa4.46□□□□□ -1.7
Usp40-204ENSMUST00000187758 Igkv3-3A0A140T8Q0 119 aa4.45□□□□□ -1.7
Usp40-204ENSMUST00000187758 Reg3aO09037 175 aa4.45□□□□□ -1.7
Usp40-204ENSMUST00000187758 Gm37013Q8K491 104 aa4.45□□□□□ -1.7
Usp40-204ENSMUST00000187758 Gm10267M0QWD8 85 aa4.44□□□□□ -1.7
Usp40-204ENSMUST00000187758 Spaca4Q80ZQ0 127 aa4.43□□□□□ -1.7
Usp40-204ENSMUST00000187758 Lrp1bQ9JI18 4599 aa4.41□□□□□ -1.7
Usp40-204ENSMUST00000187758 Gm16253D3Z167 63 aa4.41□□□□□ -1.7
Usp40-204ENSMUST00000187758 Gm20661K7N787 53 aa4.41□□□□□ -1.7
Usp40-204ENSMUST00000187758 Hectd4E9Q2E4 4418 aa4.4□□□□□ -1.7
Usp40-204ENSMUST00000187758 Gm3646F6S692 53 aa4.4□□□□□ -1.7
Usp40-204ENSMUST00000187758 Pkhd1E9PZ36 4059 aa4.39□□□□□ -1.71
Usp40-204ENSMUST00000187758 Limd2Q8BGB5 128 aa4.39□□□□□ -1.71
Usp40-204ENSMUST00000187758 Chtf8P0CG14 533 aa4.39□□□□□ -1.71
Usp40-204ENSMUST00000187758 Defb38Q7TNV7 63 aa4.38□□□□□ -1.71
Usp40-204ENSMUST00000187758 SacsQ9JLC8 4582 aa4.37□□□□□ -1.71
Usp40-204ENSMUST00000187758 Ryr1E9PZQ0 5035 aa4.37□□□□□ -1.71
Usp40-204ENSMUST00000187758 Krtap19-5O08632 62 aa4.33□□□□□ -1.72
Usp40-204ENSMUST00000187758 Cypt15B1AXS0 87 aa4.32□□□□□ -1.72
Usp40-204ENSMUST00000187758 Fat2Q5F226 4351 aa4.32□□□□□ -1.72
Usp40-204ENSMUST00000187758 Uqcr11Q9CPX8 56 aa4.31□□□□□ -1.72
Usp40-204ENSMUST00000187758 Gm2310J3QNJ2 377 aa4.3□□□□□ -1.72
Usp40-204ENSMUST00000187758 Gm9821Q8K076 103 aa4.29□□□□□ -1.72
Usp40-204ENSMUST00000187758 Defb13Q8R2I4 64 aa4.29□□□□□ -1.72
Usp40-204ENSMUST00000187758 Dnah8Q91XQ0 4731 aa4.29□□□□□ -1.72
Usp40-204ENSMUST00000187758 Pkhd1l1Q80ZA4 4249 aa4.28□□□□□ -1.72
Usp40-204ENSMUST00000187758 Rps29P62274 56 aa4.28□□□□□ -1.72
Usp40-204ENSMUST00000187758 Kmt2cQ8BRH4 4903 aa4.28□□□□□ -1.72
Usp40-204ENSMUST00000187758 Q8BGJ3 129 aa4.26□□□□□ -1.73
Usp40-204ENSMUST00000187758 D6Ertd527eA0A0N4SWI3 464 aa4.25□□□□□ -1.73
Usp40-204ENSMUST00000187758 Vps13bQ80TY5 3993 aa4.25□□□□□ -1.73
Usp40-204ENSMUST00000187758 Gm12216A0A1W2P827 62 aa4.24□□□□□ -1.73
Usp40-204ENSMUST00000187758 Fat3Q8BNA6 4555 aa4.23□□□□□ -1.73
Usp40-204ENSMUST00000187758 Lrp1Q91ZX7 4545 aaKnown RBP4.23□□□□□ -1.73
Usp40-204ENSMUST00000187758 Gm9736A0A1W2P7N1 277 aa4.2□□□□□ -1.74
Usp40-204ENSMUST00000187758 Herc2Q4U2R1 4836 aa4.18□□□□□ -1.74
Usp40-204ENSMUST00000187758 2310034C09RikQ9D746 214 aa4.16□□□□□ -1.74
Usp40-204ENSMUST00000187758 Kiaa1109A2AAE1 5005 aa4.16□□□□□ -1.74
Usp40-204ENSMUST00000187758 Abca13Q5SSE9 5034 aa4.16□□□□□ -1.74
Usp40-204ENSMUST00000187758 Birc6O88738 4882 aa4.15□□□□□ -1.74
Usp40-204ENSMUST00000187758 Gm5767A0A0J9YTU8 78 aa4.14□□□□□ -1.75
Usp40-204ENSMUST00000187758 Gm21798J3QNU5 87 aa4.14□□□□□ -1.75
Usp40-204ENSMUST00000187758 Gm11939A2A592 99 aa4.13□□□□□ -1.75
Usp40-204ENSMUST00000187758 Dnhd1D3Z2X2 4750 aa4.13□□□□□ -1.75
Usp40-204ENSMUST00000187758 Gm10999F6Q4M4 69 aa4.13□□□□□ -1.75
Usp40-204ENSMUST00000187758 Mp68P56379 58 aa4.12□□□□□ -1.75
Usp40-204ENSMUST00000187758 Gm5965D3Z724 196 aa4.12□□□□□ -1.75
Usp40-204ENSMUST00000187758 Gm20538F6Z9R1 75 aa4.1□□□□□ -1.75
Usp40-204ENSMUST00000187758 Mycbp2Q7TPH6 4711 aa4.07□□□□□ -1.76
Usp40-204ENSMUST00000187758 Defb1P56386 69 aa4.07□□□□□ -1.76
Usp40-204ENSMUST00000187758 Krtap15-1Q9QZU5 150 aa4.07□□□□□ -1.76
Usp40-204ENSMUST00000187758 Pla2g10Q9QXX3 151 aa4.06□□□□□ -1.76
Usp40-204ENSMUST00000187758 Gm4491E0CX42 125 aa4.04□□□□□ -1.76
Usp40-204ENSMUST00000187758 Krtap3-2Q9D638 99 aa4.04□□□□□ -1.76
Usp40-204ENSMUST00000187758 Krtap3-3Q9D7P0 99 aa4.04□□□□□ -1.76
Usp40-204ENSMUST00000187758 HydinQ80W93 5154 aa4.03□□□□□ -1.76
Usp40-204ENSMUST00000187758 4930507D05RikQ8C9C9 103 aa4.03□□□□□ -1.76
Usp40-204ENSMUST00000187758 Rpl37Q9D823 97 aa4.02□□□□□ -1.77
Usp40-204ENSMUST00000187758 Rnase13Q5GAM7 153 aa4.01□□□□□ -1.77
Usp40-204ENSMUST00000187758 A930033H14RikG5E8X6 103 aa3.99□□□□□ -1.77
Usp40-204ENSMUST00000187758 Lce1mQ9CR91 182 aa3.98□□□□□ -1.77
Usp40-204ENSMUST00000187758 Lrp2A2ARV4 4660 aa3.98□□□□□ -1.77
Usp40-204ENSMUST00000187758 Gm3880A0A1B0GSB3 72 aa3.97□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 144.9 ms