RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 C920008G01RikA0A0B4J1N1 112 aa4.53□□□□□ -1.68
Trim40-203ENSMUST00000172711 Gm5767A0A0J9YTU8 78 aa4.53□□□□□ -1.68
Trim40-203ENSMUST00000172711 Rnase13Q5GAM7 153 aa4.53□□□□□ -1.68
Trim40-203ENSMUST00000172711 Q8K1L6 76 aa4.53□□□□□ -1.68
Trim40-203ENSMUST00000172711 4930535I16RikQ9CUI2 172 aa4.53□□□□□ -1.68
Trim40-203ENSMUST00000172711 Rab37Q9JKM7 223 aa4.53□□□□□ -1.68
Trim40-203ENSMUST00000172711 Msrb1Q9JLC3 116 aa4.53□□□□□ -1.68
Trim40-203ENSMUST00000172711 Defa28D3Z1V9 94 aa4.52□□□□□ -1.69
Trim40-203ENSMUST00000172711 Gm10845Q3UNY9 185 aa4.52□□□□□ -1.69
Trim40-203ENSMUST00000172711 Spaca4Q80ZQ0 127 aa4.52□□□□□ -1.69
Trim40-203ENSMUST00000172711 Cd164Q9R0L9 197 aa4.52□□□□□ -1.69
Trim40-203ENSMUST00000172711 E130218I03RikA0A0U1RNU5 63 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 Brd3osA0A1B0GRB6 84 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 Gm10318A0A1W2P728 225 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 LeprotO89013 131 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 Tcl1b5P56845 121 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 Pfn2Q9JJV2 140 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 A030014E15RikA0A1Y7VJV2 120 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 Xcl1P47993 114 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 Wfdc13Q5DQQ6 81 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 A930002H24RikQ8C8Y3 163 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 Brk1Q91VR8 75 aa4.51□□□□□ -1.69
Trim40-203ENSMUST00000172711 Fam229aB2KGE5 128 aa4.5□□□□□ -1.69
Trim40-203ENSMUST00000172711 Tmem243B2RVB9 118 aa4.5□□□□□ -1.69
Trim40-203ENSMUST00000172711 Trav14d-3-dv8A0A075B619 120 aa4.49□□□□□ -1.69
Trim40-203ENSMUST00000172711 Defb47Q30KN1 79 aa4.49□□□□□ -1.69
Trim40-203ENSMUST00000172711 4930415O20RikQ8CDT5 131 aa4.49□□□□□ -1.69
Trim40-203ENSMUST00000172711 Igkv3-10A0A0G2JGN0 119 aa4.48□□□□□ -1.69
Trim40-203ENSMUST00000172711 Igkv3-5A0A140T8M6 119 aa4.48□□□□□ -1.69
Trim40-203ENSMUST00000172711 Gm42674D3YUT9 64 aa4.48□□□□□ -1.69
Trim40-203ENSMUST00000172711 Gm10139O88245 57 aa4.48□□□□□ -1.69
Trim40-203ENSMUST00000172711 Rmi2Q3UPE3 149 aa4.48□□□□□ -1.69
Trim40-203ENSMUST00000172711 Defa21Q8C1P2 93 aa4.47□□□□□ -1.69
Trim40-203ENSMUST00000172711 Znf706Q9D115 76 aaKnown RBP4.46□□□□□ -1.69
Trim40-203ENSMUST00000172711 SspoQ8CG65 4998 aa4.46□□□□□ -1.7
Trim40-203ENSMUST00000172711 1700011M02RikB1AX35 88 aa4.46□□□□□ -1.7
Trim40-203ENSMUST00000172711 Krtap19-3Q925H6 87 aa4.46□□□□□ -1.7
Trim40-203ENSMUST00000172711 Lce1dQ9D731 133 aa4.46□□□□□ -1.7
Trim40-203ENSMUST00000172711 Q9DAA7 145 aa4.46□□□□□ -1.7
Trim40-203ENSMUST00000172711 Timm17bQ9Z0V7 172 aa4.45□□□□□ -1.7
Trim40-203ENSMUST00000172711 Gm29423A0A087WRM1 55 aa4.44□□□□□ -1.7
Trim40-203ENSMUST00000172711 A0A1Y7VJ07 166 aa4.44□□□□□ -1.7
Trim40-203ENSMUST00000172711 Krtap16-3Q8C1I6 86 aa4.44□□□□□ -1.7
Trim40-203ENSMUST00000172711 Cypt14J3QPF7 87 aa4.43□□□□□ -1.7
Trim40-203ENSMUST00000172711 Krtap19-1Q925H2 87 aa4.43□□□□□ -1.7
Trim40-203ENSMUST00000172711 2310034G01RikA0A286YDL3 209 aa4.42□□□□□ -1.7
Trim40-203ENSMUST00000172711 Pet100P0DJE0 76 aa4.42□□□□□ -1.7
Trim40-203ENSMUST00000172711 Igkv8-26A0A075B5N5 123 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Tmem254aP0DN89 123 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Tmem254bP0DN90 123 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Tmem254cP0DN91 123 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Acyp1P56376 99 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Cox7bP56393 80 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Rps29P62274 56 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 UqcrqQ9CQ69 82 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Sostdc1Q9CQN4 206 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Ndufc1Q9CQY9 76 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 1700010B08RikQ9DAI7 102 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 SelenowP63300 88 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 2310034C09RikQ9D746 214 aa4.41□□□□□ -1.7
Trim40-203ENSMUST00000172711 Igkv1-117A0A140T8M0 119 aa4.4□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm3646F6S692 53 aa4.4□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm11020F6ZGD5 61 aa4.4□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm2310J3QNJ2 377 aa4.4□□□□□ -1.71
Trim40-203ENSMUST00000172711 Chchd10Q7TNL9 138 aa4.4□□□□□ -1.71
Trim40-203ENSMUST00000172711 Prelid3aQ8VE85 172 aa4.4□□□□□ -1.71
Trim40-203ENSMUST00000172711 Spint4Q9D263 159 aa4.4□□□□□ -1.71
Trim40-203ENSMUST00000172711 SnurfQ9WU12 71 aa4.4□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm10643Q3URG9 111 aa4.39□□□□□ -1.71
Trim40-203ENSMUST00000172711 Igkv8-18A0A0B4J1J3 123 aa4.38□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm11596B1AQB0 205 aa4.38□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm5153P01627 120 aa4.38□□□□□ -1.71
Trim40-203ENSMUST00000172711 Naa38Q9D2U5 125 aa4.38□□□□□ -1.71
Trim40-203ENSMUST00000172711 4933415A04RikQ9D443 101 aa4.38□□□□□ -1.71
Trim40-203ENSMUST00000172711 1700042G07RikB1AUF7 90 aa4.37□□□□□ -1.71
Trim40-203ENSMUST00000172711 Glrp1E9Q9S8 174 aa4.37□□□□□ -1.71
Trim40-203ENSMUST00000172711 Dnal4Q9DCM4 105 aa4.36□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm9805F6YK59 57 aa4.36□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm10100J3QK64 120 aa4.36□□□□□ -1.71
Trim40-203ENSMUST00000172711 Rbm3O89086 153 aaKnown RBP4.36□□□□□ -1.71
Trim40-203ENSMUST00000172711 Krtap1-4Q3V2D6 188 aa4.36□□□□□ -1.71
Trim40-203ENSMUST00000172711 Defb37Q7TMD2 62 aa4.36□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm10308Q9CVR5 141 aa4.36□□□□□ -1.71
Trim40-203ENSMUST00000172711 B230307C23RikQ8BLB2 64 aa4.35□□□□□ -1.71
Trim40-203ENSMUST00000172711 Igkv1-122A0A140T8M9 119 aa4.34□□□□□ -1.71
Trim40-203ENSMUST00000172711 Defb29Q8BGW9 78 aa4.34□□□□□ -1.71
Trim40-203ENSMUST00000172711 Gm26620Q9CY65 116 aa4.33□□□□□ -1.72
Trim40-203ENSMUST00000172711 Muc5bE9Q5I3 4800 aa4.33□□□□□ -1.72
Trim40-203ENSMUST00000172711 Gm10770F7D043 238 aa4.32□□□□□ -1.72
Trim40-203ENSMUST00000172711 Gm7276Q3TYW4 209 aa4.32□□□□□ -1.72
Trim40-203ENSMUST00000172711 Smim26Q3V460 107 aa4.32□□□□□ -1.72
Trim40-203ENSMUST00000172711 Cdc42se1Q8BHL7 80 aa4.31□□□□□ -1.72
Trim40-203ENSMUST00000172711 A830005F24RikQ8BRT5 167 aa4.31□□□□□ -1.72
Trim40-203ENSMUST00000172711 4930524J08RikQ9CUJ5 163 aa4.31□□□□□ -1.72
Trim40-203ENSMUST00000172711 Igkv4-58A0A0G2JGI6 119 aa4.31□□□□□ -1.72
Trim40-203ENSMUST00000172711 Gm10401E9Q3K6 71 aa4.31□□□□□ -1.72
Trim40-203ENSMUST00000172711 Gm21886J3QJU9 214 aa4.3□□□□□ -1.72
Trim40-203ENSMUST00000172711 BikO70337 150 aa4.3□□□□□ -1.72
Trim40-203ENSMUST00000172711 Spink8Q09TK9 105 aa4.3□□□□□ -1.72
Trim40-203ENSMUST00000172711 Elof1P60003 83 aa4.29□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms