RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 SpegQ62407 3262 aa4.92□□□□□ -1.62
Col6a5-201ENSMUST00000165165 2310061N02RikQ9D6S9 174 aa4.91□□□□□ -1.62
Col6a5-201ENSMUST00000165165 Srrm2Q8BTI8 2703 aaKnown RBP4.91□□□□□ -1.62
Col6a5-201ENSMUST00000165165 FrylF8VQ05 3007 aa4.91□□□□□ -1.62
Col6a5-201ENSMUST00000165165 Tex15F8VPN2 2785 aa4.9□□□□□ -1.62
Col6a5-201ENSMUST00000165165 Dchs2A0A0A6YW72 3346 aa4.9□□□□□ -1.62
Col6a5-201ENSMUST00000165165 Itpr1P11881 2749 aa4.9□□□□□ -1.63
Col6a5-201ENSMUST00000165165 Col6a3E9PWQ3 3284 aa4.89□□□□□ -1.63
Col6a5-201ENSMUST00000165165 Nbeal2Q6ZQA0 2742 aa4.86□□□□□ -1.63
Col6a5-201ENSMUST00000165165 Myo15aQ9QZZ4 3511 aa4.86□□□□□ -1.63
Col6a5-201ENSMUST00000165165 AspmQ8CJ27 3122 aa4.86□□□□□ -1.63
Col6a5-201ENSMUST00000165165 Pkd1l1Q8R526 2615 aa4.85□□□□□ -1.63
Col6a5-201ENSMUST00000165165 Gm2696A0A1W2P709 240 aa4.85□□□□□ -1.63
Col6a5-201ENSMUST00000165165 Lrrc37aB1AWG4 3215 aa4.85□□□□□ -1.63
Col6a5-201ENSMUST00000165165 Zzef1Q5SSH7 2924 aa4.84□□□□□ -1.63
Col6a5-201ENSMUST00000165165 Celsr1O35161 3034 aa4.82□□□□□ -1.64
Col6a5-201ENSMUST00000165165 Vps13cQ8BX70 3748 aa4.82□□□□□ -1.64
Col6a5-201ENSMUST00000165165 4933428G20RikQ9D3X4 101 aa4.82□□□□□ -1.64
Col6a5-201ENSMUST00000165165 Col6a5A6H584 2640 aa4.79□□□□□ -1.64
Col6a5-201ENSMUST00000165165 Muc2Q80Z19 2680 aa4.79□□□□□ -1.64
Col6a5-201ENSMUST00000165165 LrbaQ9ESE1 2856 aa4.78□□□□□ -1.64
Col6a5-201ENSMUST00000165165 Gm9918Q8BUR5 174 aa4.78□□□□□ -1.64
Col6a5-201ENSMUST00000165165 A930033H14RikG5E8X6 103 aa4.77□□□□□ -1.65
Col6a5-201ENSMUST00000165165 TgO08710 2766 aa4.77□□□□□ -1.65
Col6a5-201ENSMUST00000165165 Csmd1Q923L3 3564 aa4.77□□□□□ -1.65
Col6a5-201ENSMUST00000165165 Adgrg4B7ZCC9 3073 aa4.75□□□□□ -1.65
Col6a5-201ENSMUST00000165165 Chd9Q8BYH8 2885 aa4.75□□□□□ -1.65
Col6a5-201ENSMUST00000165165 Trank1Q8BV79 2999 aa4.73□□□□□ -1.65
Col6a5-201ENSMUST00000165165 Dchs1E9PVD3 3291 aa4.73□□□□□ -1.65
Col6a5-201ENSMUST00000165165 Cmya5Q70KF4 3739 aa4.72□□□□□ -1.65
Col6a5-201ENSMUST00000165165 VcanQ62059 3357 aa4.7□□□□□ -1.66
Col6a5-201ENSMUST00000165165 Gm17402F6Z0L5 76 aa4.68□□□□□ -1.66
Col6a5-201ENSMUST00000165165 Wdfy3Q6VNB8 3508 aa4.67□□□□□ -1.66
Col6a5-201ENSMUST00000165165 Smg1Q8BKX6 3658 aaKnown RBP4.66□□□□□ -1.66
Col6a5-201ENSMUST00000165165 2310079G19RikQ9D6L6 185 aa4.66□□□□□ -1.66
Col6a5-201ENSMUST00000165165 NbeaQ9EPN1 2936 aa4.64□□□□□ -1.67
Col6a5-201ENSMUST00000165165 Tenm3Q9WTS6 2715 aa4.63□□□□□ -1.67
Col6a5-201ENSMUST00000165165 DmdP11531 3678 aa4.63□□□□□ -1.67
Col6a5-201ENSMUST00000165165 RelnQ60841 3461 aa4.62□□□□□ -1.67
Col6a5-201ENSMUST00000165165 SpenQ62504 3644 aaKnown RBP4.62□□□□□ -1.67
Col6a5-201ENSMUST00000165165 Igfn1Q3KNY0 2849 aa4.61□□□□□ -1.67
Col6a5-201ENSMUST00000165165 Gm19668J3QMD1 248 aa4.61□□□□□ -1.67
Col6a5-201ENSMUST00000165165 Hivep1Q03172 2688 aa4.61□□□□□ -1.67
Col6a5-201ENSMUST00000165165 FlncQ8VHX6 2726 aaKnown RBP4.59□□□□□ -1.67
Col6a5-201ENSMUST00000165165 Zfhx4Q9JJN2 3550 aa4.59□□□□□ -1.67
Col6a5-201ENSMUST00000165165 Tenm1Q9WTS4 2731 aa4.57□□□□□ -1.68
Col6a5-201ENSMUST00000165165 Gm17416Q30KP4 66 aa4.56□□□□□ -1.68
Col6a5-201ENSMUST00000165165 Pdzd2E9Q1M1 2796 aa4.54□□□□□ -1.68
Col6a5-201ENSMUST00000165165 Nf1Q04690 2841 aa4.54□□□□□ -1.68
Col6a5-201ENSMUST00000165165 2210017I01RikA0A0A6YVV1 95 aa4.51□□□□□ -1.69
Col6a5-201ENSMUST00000165165 Celsr2Q9R0M0 2920 aa4.5□□□□□ -1.69
Col6a5-201ENSMUST00000165165 Gm9736A0A1W2P7N1 277 aa4.45□□□□□ -1.7
Col6a5-201ENSMUST00000165165 Tenm4Q3UHK6 2771 aa4.43□□□□□ -1.7
Col6a5-201ENSMUST00000165165 Gm884A2A9H6 3643 aa4.41□□□□□ -1.7
Col6a5-201ENSMUST00000165165 Muc5acE9QAQ8 3455 aa4.4□□□□□ -1.71
Col6a5-201ENSMUST00000165165 Csmd2V9GX34 3611 aa4.39□□□□□ -1.71
Col6a5-201ENSMUST00000165165 Gm10318A0A1W2P728 225 aa4.37□□□□□ -1.71
Col6a5-201ENSMUST00000165165 Ank2Q8C8R3 3898 aa4.35□□□□□ -1.71
Col6a5-201ENSMUST00000165165 Gm6358A0A087WPH4 74 aa4.34□□□□□ -1.71
Col6a5-201ENSMUST00000165165 Megf8P60882 2789 aa4.34□□□□□ -1.71
Col6a5-201ENSMUST00000165165 Lama5Q61001 3718 aa4.33□□□□□ -1.72
Col6a5-201ENSMUST00000165165 OtogO55225 2910 aa4.31□□□□□ -1.72
Col6a5-201ENSMUST00000165165 Gm18596A0A1W2P860 280 aa4.26□□□□□ -1.73
Col6a5-201ENSMUST00000165165 Krtap13-1Q8K198 168 aa4.26□□□□□ -1.73
Col6a5-201ENSMUST00000165165 Helz2E9QAM5 2947 aaKnown RBP4.24□□□□□ -1.73
Col6a5-201ENSMUST00000165165 Crct1Q6PAI5 102 aa4.22□□□□□ -1.73
Col6a5-201ENSMUST00000165165 VwfQ8CIZ8 2813 aa4.22□□□□□ -1.73
Col6a5-201ENSMUST00000165165 Tenm2Q9WTS5 2764 aa4.17□□□□□ -1.74
Col6a5-201ENSMUST00000165165 Fbn1Q61554 2873 aaKnown RBP4.16□□□□□ -1.74
Col6a5-201ENSMUST00000165165 Csmd3Q80T79 3707 aa4.14□□□□□ -1.75
Col6a5-201ENSMUST00000165165 Hspg2Q05793 3707 aaKnown RBP4.14□□□□□ -1.75
Col6a5-201ENSMUST00000165165 Gm19402J3QJV4 266 aa4.12□□□□□ -1.75
Col6a5-201ENSMUST00000165165 Gm11939A2A592 99 aa4.11□□□□□ -1.75
Col6a5-201ENSMUST00000165165 Krtap3-1A2A591 98 aa4.1□□□□□ -1.75
Col6a5-201ENSMUST00000165165 LystP97412 3788 aa4.09□□□□□ -1.75
Col6a5-201ENSMUST00000165165 Xirp2Q4U4S6 3784 aa4.09□□□□□ -1.76
Col6a5-201ENSMUST00000165165 Krtap7-1Q9D3I6 87 aa4.07□□□□□ -1.76
Col6a5-201ENSMUST00000165165 Muc6Q80T03 2850 aa4.07□□□□□ -1.76
Col6a5-201ENSMUST00000165165 Krtap3-2Q9D638 99 aa4.04□□□□□ -1.76
Col6a5-201ENSMUST00000165165 Krtap3-3Q9D7P0 99 aa4.04□□□□□ -1.76
Col6a5-201ENSMUST00000165165 BsnO88737 3942 aa4.04□□□□□ -1.76
Col6a5-201ENSMUST00000165165 Sprr2kO70562 68 aa4.04□□□□□ -1.76
Col6a5-201ENSMUST00000165165 Krtap8-1O08633 61 aa4.01□□□□□ -1.77
Col6a5-201ENSMUST00000165165 Krtap19-5O08632 62 aa4□□□□□ -1.77
Col6a5-201ENSMUST00000165165 CubnQ9JLB4 3623 aa3.99□□□□□ -1.77
Col6a5-201ENSMUST00000165165 Col7a1Q63870 2944 aa3.98□□□□□ -1.77
Col6a5-201ENSMUST00000165165 Svep1A2AVA0 3567 aa3.97□□□□□ -1.77
Col6a5-201ENSMUST00000165165 Krtap19-9aF8WH65 55 aa3.94□□□□□ -1.78
Col6a5-201ENSMUST00000165165 Muc4Q8JZM8 3443 aa3.92□□□□□ -1.78
Col6a5-201ENSMUST00000165165 Krtap19-9bQ99NG9 58 aa3.87□□□□□ -1.79
Col6a5-201ENSMUST00000165165 Krtap12-1Q9Z287 130 aa3.87□□□□□ -1.79
Col6a5-201ENSMUST00000165165 Sprr2a3Q4KL71 83 aa3.87□□□□□ -1.79
Col6a5-201ENSMUST00000165165 Sprr2a1Q9CQK8 83 aa3.87□□□□□ -1.79
Col6a5-201ENSMUST00000165165 Sprr2gO70558 76 aa3.86□□□□□ -1.79
Col6a5-201ENSMUST00000165165 Vps13bQ80TY5 3993 aa3.85□□□□□ -1.79
Col6a5-201ENSMUST00000165165 Huwe1Q7TMY8 4377 aaKnown RBP3.85□□□□□ -1.79
Col6a5-201ENSMUST00000165165 Dnah7bL7N1Y0 4068 aa3.81□□□□□ -1.8
Col6a5-201ENSMUST00000165165 Krtap1-5A2A590 122 aa3.79□□□□□ -1.8
Col6a5-201ENSMUST00000165165 Dnah7cA0A087WR13 4024 aa3.76□□□□□ -1.81
Col6a5-201ENSMUST00000165165 Dnah3Q8BW94 4083 aa3.75□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 106.4 ms