RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 Igsf10Q3V1M1 2594 aa3.69□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Tenm4Q3UHK6 2771 aa3.68□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Tnp2P11378 117 aa3.67□□□□□ -1.82
Ube4a-201ENSMUST00000117506 SmcpP15265 143 aa3.67□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Zzef1Q5SSH7 2924 aa3.66□□□□□ -1.82
Ube4a-201ENSMUST00000117506 DspE9Q557 2883 aaKnown RBP3.66□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Adgrg4B7ZCC9 3073 aa3.65□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Tenm3Q9WTS6 2715 aa3.65□□□□□ -1.83
Ube4a-201ENSMUST00000117506 Gm9508A0A1W2P7W0 230 aa3.64□□□□□ -1.83
Ube4a-201ENSMUST00000117506 DmdP11531 3678 aa3.62□□□□□ -1.83
Ube4a-201ENSMUST00000117506 Vps13cQ8BX70 3748 aa3.62□□□□□ -1.83
Ube4a-201ENSMUST00000117506 Celsr1O35161 3034 aa3.62□□□□□ -1.83
Ube4a-201ENSMUST00000117506 Hivep1Q03172 2688 aa3.62□□□□□ -1.83
Ube4a-201ENSMUST00000117506 Gm9507D3Z5T3 223 aa3.61□□□□□ -1.83
Ube4a-201ENSMUST00000117506 Col6a5A6H584 2640 aa3.6□□□□□ -1.83
Ube4a-201ENSMUST00000117506 D6Ertd527eA0A0N4SWI3 464 aa3.6□□□□□ -1.83
Ube4a-201ENSMUST00000117506 Stab2Q8R4U0 2559 aa3.58□□□□□ -1.84
Ube4a-201ENSMUST00000117506 Igfn1Q3KNY0 2849 aa3.57□□□□□ -1.84
Ube4a-201ENSMUST00000117506 Ank2Q8C8R3 3898 aa3.55□□□□□ -1.84
Ube4a-201ENSMUST00000117506 Brca2P97929 3329 aa3.54□□□□□ -1.84
Ube4a-201ENSMUST00000117506 Celsr2Q9R0M0 2920 aa3.54□□□□□ -1.84
Ube4a-201ENSMUST00000117506 Celsr3Q91ZI0 3301 aa3.54□□□□□ -1.84
Ube4a-201ENSMUST00000117506 VcanQ62059 3357 aa3.53□□□□□ -1.84
Ube4a-201ENSMUST00000117506 Col6a3E9PWQ3 3284 aa3.52□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Gm5965D3Z724 196 aa3.52□□□□□ -1.85
Ube4a-201ENSMUST00000117506 OtogO55225 2910 aa3.51□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Nbeal2Q6ZQA0 2742 aa3.51□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Pdzd2E9Q1M1 2796 aa3.5□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Srrm2Q8BTI8 2703 aaKnown RBP3.5□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Zfhx4Q9JJN2 3550 aa3.5□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Tex15F8VPN2 2785 aa3.49□□□□□ -1.85
Ube4a-201ENSMUST00000117506 RelnQ60841 3461 aa3.49□□□□□ -1.85
Ube4a-201ENSMUST00000117506 SpegQ62407 3262 aa3.49□□□□□ -1.85
Ube4a-201ENSMUST00000117506 LrbaQ9ESE1 2856 aa3.48□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Nf1Q04690 2841 aa3.47□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Krtap10-4Q08EG8 221 aa3.47□□□□□ -1.85
Ube4a-201ENSMUST00000117506 2310057N15RikQ9D6T8 200 aa3.47□□□□□ -1.85
Ube4a-201ENSMUST00000117506 FcgbpE9Q0B5 2583 aa3.46□□□□□ -1.85
Ube4a-201ENSMUST00000117506 Pkd1l1Q8R526 2615 aa3.46□□□□□ -1.86
Ube4a-201ENSMUST00000117506 Dchs2A0A0A6YW72 3346 aa3.45□□□□□ -1.86
Ube4a-201ENSMUST00000117506 B930094E09RikQ8C4T2 136 aa3.45□□□□□ -1.86
Ube4a-201ENSMUST00000117506 TgO08710 2766 aa3.44□□□□□ -1.86
Ube4a-201ENSMUST00000117506 ApcQ61315 2845 aa3.43□□□□□ -1.86
Ube4a-201ENSMUST00000117506 Chd9Q8BYH8 2885 aa3.42□□□□□ -1.86
Ube4a-201ENSMUST00000117506 Gm20537G3UYK7 97 aa3.42□□□□□ -1.86
Ube4a-201ENSMUST00000117506 HrnrQ8VHD8 2496 aa3.42□□□□□ -1.86
Ube4a-201ENSMUST00000117506 Akap9Q70FJ1 3797 aa3.41□□□□□ -1.86
Ube4a-201ENSMUST00000117506 4933428G20RikQ9D3X4 101 aa3.4□□□□□ -1.86
Ube4a-201ENSMUST00000117506 Gm17402F6Z0L5 76 aa3.4□□□□□ -1.86
Ube4a-201ENSMUST00000117506 Myo15aQ9QZZ4 3511 aa3.4□□□□□ -1.86
Ube4a-201ENSMUST00000117506 Prm2P07978 107 aa3.4□□□□□ -1.87
Ube4a-201ENSMUST00000117506 Zfhx3Q61329 3726 aa3.39□□□□□ -1.87
Ube4a-201ENSMUST00000117506 Gm2696A0A1W2P709 240 aa3.39□□□□□ -1.87
Ube4a-201ENSMUST00000117506 Gm884A2A9H6 3643 aa3.38□□□□□ -1.87
Ube4a-201ENSMUST00000117506 Fbn1Q61554 2873 aaKnown RBP3.38□□□□□ -1.87
Ube4a-201ENSMUST00000117506 A930033H14RikG5E8X6 103 aa3.36□□□□□ -1.87
Ube4a-201ENSMUST00000117506 Lama5Q61001 3718 aa3.35□□□□□ -1.87
Ube4a-201ENSMUST00000117506 Dchs1E9PVD3 3291 aa3.35□□□□□ -1.87
Ube4a-201ENSMUST00000117506 Gm9918Q8BUR5 174 aa3.34□□□□□ -1.87
Ube4a-201ENSMUST00000117506 Gm17416Q30KP4 66 aa3.31□□□□□ -1.88
Ube4a-201ENSMUST00000117506 Tenm1Q9WTS4 2731 aa3.3□□□□□ -1.88
Ube4a-201ENSMUST00000117506 Muc5acE9QAQ8 3455 aa3.28□□□□□ -1.88
Ube4a-201ENSMUST00000117506 Smg1Q8BKX6 3658 aaKnown RBP3.24□□□□□ -1.89
Ube4a-201ENSMUST00000117506 2310079G19RikQ9D6L6 185 aa3.24□□□□□ -1.89
Ube4a-201ENSMUST00000117506 SpenQ62504 3644 aaKnown RBP3.24□□□□□ -1.89
Ube4a-201ENSMUST00000117506 Dnah17Q69Z23 4481 aa3.23□□□□□ -1.89
Ube4a-201ENSMUST00000117506 Svep1A2AVA0 3567 aa3.23□□□□□ -1.89
Ube4a-201ENSMUST00000117506 Helz2E9QAM5 2947 aaKnown RBP3.23□□□□□ -1.89
Ube4a-201ENSMUST00000117506 Col7a1Q63870 2944 aa3.23□□□□□ -1.89
Ube4a-201ENSMUST00000117506 Dnah14A0A140LIJ4 4489 aa3.2□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Tenm2Q9WTS5 2764 aa3.19□□□□□ -1.9
Ube4a-201ENSMUST00000117506 2210017I01RikA0A0A6YVV1 95 aa3.19□□□□□ -1.9
Ube4a-201ENSMUST00000117506 LystP97412 3788 aa3.19□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Gm18596A0A1W2P860 280 aa3.18□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Huwe1Q7TMY8 4377 aaKnown RBP3.18□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Krtap19-5O08632 62 aa3.18□□□□□ -1.9
Ube4a-201ENSMUST00000117506 TnxbO35452 4006 aa3.18□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Megf8P60882 2789 aa3.17□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Csmd1Q923L3 3564 aa3.17□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Gm11939A2A592 99 aa3.17□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Gm19668J3QMD1 248 aa3.16□□□□□ -1.9
Ube4a-201ENSMUST00000117506 Vps13dB1ART2 4390 aa3.11□□□□□ -1.91
Ube4a-201ENSMUST00000117506 Lce1mQ9CR91 182 aa3.11□□□□□ -1.91
Ube4a-201ENSMUST00000117506 VwfQ8CIZ8 2813 aa3.11□□□□□ -1.91
Ube4a-201ENSMUST00000117506 Krtap3-2Q9D638 99 aa3.1□□□□□ -1.91
Ube4a-201ENSMUST00000117506 Krtap3-3Q9D7P0 99 aa3.1□□□□□ -1.91
Ube4a-201ENSMUST00000117506 Dnah3Q8BW94 4083 aa3.1□□□□□ -1.91
Ube4a-201ENSMUST00000117506 Dync2h1Q45VK7 4306 aa3.09□□□□□ -1.91
Ube4a-201ENSMUST00000117506 PlecQ9QXS1 4691 aaKnown RBP3.08□□□□□ -1.92
Ube4a-201ENSMUST00000117506 Gm9736A0A1W2P7N1 277 aa3.08□□□□□ -1.92
Ube4a-201ENSMUST00000117506 Cmya5Q70KF4 3739 aa3.08□□□□□ -1.92
Ube4a-201ENSMUST00000117506 BsnO88737 3942 aa3.07□□□□□ -1.92
Ube4a-201ENSMUST00000117506 Dnah1E9Q8T7 4250 aa3.04□□□□□ -1.92
Ube4a-201ENSMUST00000117506 Muc6Q80T03 2850 aa3.03□□□□□ -1.92
Ube4a-201ENSMUST00000117506 Pkd1O08852 4293 aa3.03□□□□□ -1.92
Ube4a-201ENSMUST00000117506 Stard9Q80TF6 4561 aa3.02□□□□□ -1.93
Ube4a-201ENSMUST00000117506 Dnah5Q8VHE6 4621 aa3.02□□□□□ -1.93
Ube4a-201ENSMUST00000117506 PrkdcP97313 4128 aa3.01□□□□□ -1.93
Ube4a-201ENSMUST00000117506 Kmt2aP55200 3966 aa3□□□□□ -1.93
Ube4a-201ENSMUST00000117506 Dnah2P0C6F1 4456 aa3□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms