RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Defb12Q8K4N3 78 aa7.29□□□□□ -1.24
Trim50-202ENSMUST00000111180 4930535I16RikQ9CUI2 172 aa7.29□□□□□ -1.24
Trim50-202ENSMUST00000111180 HrnrQ8VHD8 2496 aa7.28□□□□□ -1.24
Trim50-202ENSMUST00000111180 Gm16253D3Z167 63 aa7.27□□□□□ -1.25
Trim50-202ENSMUST00000111180 Ush2AQ2QI47 5193 aa7.27□□□□□ -1.25
Trim50-202ENSMUST00000111180 C130032M10RikQ8C888 123 aa7.26□□□□□ -1.25
Trim50-202ENSMUST00000111180 Gm21886J3QJU9 214 aa7.25□□□□□ -1.25
Trim50-202ENSMUST00000111180 4932415D10RikA0A1W2P6U8 4986 aa7.25□□□□□ -1.25
Trim50-202ENSMUST00000111180 Gm9736A0A1W2P7N1 277 aa7.24□□□□□ -1.25
Trim50-202ENSMUST00000111180 A930033H14RikG5E8X6 103 aa7.24□□□□□ -1.25
Trim50-202ENSMUST00000111180 Gm17689B3GLJ4 109 aa7.21□□□□□ -1.26
Trim50-202ENSMUST00000111180 Spaca4Q80ZQ0 127 aa7.21□□□□□ -1.26
Trim50-202ENSMUST00000111180 Gm9789Q8BIG3 52 aa7.21□□□□□ -1.26
Trim50-202ENSMUST00000111180 Atp5eP56382 52 aa7.2□□□□□ -1.26
Trim50-202ENSMUST00000111180 Dph3Q8K0W9 82 aa7.19□□□□□ -1.26
Trim50-202ENSMUST00000111180 Hist1h4aP62806 103 aaKnown RBP7.17□□□□□ -1.26
Trim50-202ENSMUST00000111180 Reg3aO09037 175 aa7.16□□□□□ -1.26
Trim50-202ENSMUST00000111180 Rps29P62274 56 aa7.16□□□□□ -1.26
Trim50-202ENSMUST00000111180 Igkv8-19A0A0G2JFN8 121 aa7.15□□□□□ -1.27
Trim50-202ENSMUST00000111180 Gm2310J3QNJ2 377 aa7.12□□□□□ -1.27
Trim50-202ENSMUST00000111180 GhrhP16043 103 aa7.12□□□□□ -1.27
Trim50-202ENSMUST00000111180 Hmcn2A2AJ76 5100 aa7.12□□□□□ -1.27
Trim50-202ENSMUST00000111180 Ubr4A2AN08 5180 aa7.12□□□□□ -1.27
Trim50-202ENSMUST00000111180 Defa21Q8C1P2 93 aa7.11□□□□□ -1.27
Trim50-202ENSMUST00000111180 Prr15lQ8JZM2 100 aa7.09□□□□□ -1.27
Trim50-202ENSMUST00000111180 Ndufc1Q9CQY9 76 aa7.08□□□□□ -1.28
Trim50-202ENSMUST00000111180 Anapc13Q8R034 74 aa7.07□□□□□ -1.28
Trim50-202ENSMUST00000111180 Igkv3-3A0A140T8Q0 119 aa7.06□□□□□ -1.28
Trim50-202ENSMUST00000111180 Cypt15B1AXS0 87 aa7.05□□□□□ -1.28
Trim50-202ENSMUST00000111180 Cystm1Q8K353 104 aa7.02□□□□□ -1.29
Trim50-202ENSMUST00000111180 Samd13D3YUG0 102 aa7.01□□□□□ -1.29
Trim50-202ENSMUST00000111180 A0A286YE49 62 aa7□□□□□ -1.29
Trim50-202ENSMUST00000111180 BikO70337 150 aa6.98□□□□□ -1.29
Trim50-202ENSMUST00000111180 Fam229bQ8CF36 80 aa6.97□□□□□ -1.29
Trim50-202ENSMUST00000111180 Spink8Q09TK9 105 aa6.96□□□□□ -1.3
Trim50-202ENSMUST00000111180 Naa38Q9D2U5 125 aa6.94□□□□□ -1.3
Trim50-202ENSMUST00000111180 4930518I15RikQ3V2W7 57 aa6.92□□□□□ -1.3
Trim50-202ENSMUST00000111180 7530416G11RikJ3QJX6 159 aa6.92□□□□□ -1.3
Trim50-202ENSMUST00000111180 Serp2Q6TAW2 65 aa6.92□□□□□ -1.3
Trim50-202ENSMUST00000111180 Gm26620Q9CY65 116 aa6.92□□□□□ -1.3
Trim50-202ENSMUST00000111180 Gm5965D3Z724 196 aa6.91□□□□□ -1.3
Trim50-202ENSMUST00000111180 Defb13Q8R2I4 64 aa6.91□□□□□ -1.3
Trim50-202ENSMUST00000111180 Scgb1b2O35176 93 aa6.88□□□□□ -1.31
Trim50-202ENSMUST00000111180 Gm10267M0QWD8 85 aa6.86□□□□□ -1.31
Trim50-202ENSMUST00000111180 1700074P13RikQ9D9G7 251 aa6.86□□□□□ -1.31
Trim50-202ENSMUST00000111180 Gm11939A2A592 99 aa6.85□□□□□ -1.31
Trim50-202ENSMUST00000111180 Gm5767A0A0J9YTU8 78 aa6.84□□□□□ -1.31
Trim50-202ENSMUST00000111180 B230307C23RikQ8BLB2 64 aa6.8□□□□□ -1.32
Trim50-202ENSMUST00000111180 Atox1O08997 68 aaKnown RBP6.79□□□□□ -1.32
Trim50-202ENSMUST00000111180 Krtap17-1A2A5X6 109 aa6.76□□□□□ -1.33
Trim50-202ENSMUST00000111180 Apoc4Q61268 124 aa6.75□□□□□ -1.33
Trim50-202ENSMUST00000111180 Coa6Q8BGD8 79 aa6.75□□□□□ -1.33
Trim50-202ENSMUST00000111180 Spint4Q9D263 159 aa6.73□□□□□ -1.33
Trim50-202ENSMUST00000111180 Krtap1-3A2A588 173 aa6.7□□□□□ -1.34
Trim50-202ENSMUST00000111180 Gm9821Q8K076 103 aa6.7□□□□□ -1.34
Trim50-202ENSMUST00000111180 ZanO88799 5376 aa6.68□□□□□ -1.34
Trim50-202ENSMUST00000111180 Prr13Q9CQJ5 137 aa6.67□□□□□ -1.34
Trim50-202ENSMUST00000111180 Krtap3-2Q9D638 99 aa6.67□□□□□ -1.34
Trim50-202ENSMUST00000111180 2310057N15RikQ9D6T8 200 aa6.67□□□□□ -1.34
Trim50-202ENSMUST00000111180 Krtap3-3Q9D7P0 99 aa6.67□□□□□ -1.34
Trim50-202ENSMUST00000111180 Rpl37Q9D823 97 aa6.66□□□□□ -1.34
Trim50-202ENSMUST00000111180 Smlr1J3QMJ4 66 aa6.65□□□□□ -1.35
Trim50-202ENSMUST00000111180 Krtap15-1Q9QZU5 150 aa6.65□□□□□ -1.35
Trim50-202ENSMUST00000111180 Fat4Q2PZL6 4981 aa6.63□□□□□ -1.35
Trim50-202ENSMUST00000111180 Chtf8P0CG14 533 aa6.63□□□□□ -1.35
Trim50-202ENSMUST00000111180 Gm28539A0A087WSL9 92 aa6.62□□□□□ -1.35
Trim50-202ENSMUST00000111180 Gm10160F6Y577 67 aa6.61□□□□□ -1.35
Trim50-202ENSMUST00000111180 Tmem258P61166 79 aa6.61□□□□□ -1.35
Trim50-202ENSMUST00000111180 Crct1Q6PAI5 102 aa6.61□□□□□ -1.35
Trim50-202ENSMUST00000111180 Gm4491E0CX42 125 aa6.6□□□□□ -1.35
Trim50-202ENSMUST00000111180 Gm10999F6Q4M4 69 aa6.59□□□□□ -1.36
Trim50-202ENSMUST00000111180 Sec61bQ9CQS8 96 aaKnown RBP6.59□□□□□ -1.36
Trim50-202ENSMUST00000111180 Q8BGJ3 129 aa6.58□□□□□ -1.36
Trim50-202ENSMUST00000111180 LorP18165 486 aa6.57□□□□□ -1.36
Trim50-202ENSMUST00000111180 Gm10643Q3URG9 111 aa6.56□□□□□ -1.36
Trim50-202ENSMUST00000111180 Rnase13Q5GAM7 153 aa6.56□□□□□ -1.36
Trim50-202ENSMUST00000111180 Defb38Q7TNV7 63 aa6.56□□□□□ -1.36
Trim50-202ENSMUST00000111180 Gm19402J3QJV4 266 aa6.55□□□□□ -1.36
Trim50-202ENSMUST00000111180 Coa5Q99M07 74 aa6.55□□□□□ -1.36
Trim50-202ENSMUST00000111180 Gm19935A0A1B0GSF9 52 aa6.54□□□□□ -1.36
Trim50-202ENSMUST00000111180 Pet100P0DJE0 76 aa6.53□□□□□ -1.36
Trim50-202ENSMUST00000111180 9230102O04RikA2ASX7 82 aa6.53□□□□□ -1.36
Trim50-202ENSMUST00000111180 Gm11562A0PK51 136 aa6.52□□□□□ -1.37
Trim50-202ENSMUST00000111180 Gm21798J3QNU5 87 aa6.52□□□□□ -1.37
Trim50-202ENSMUST00000111180 4930507D05RikQ8C9C9 103 aa6.51□□□□□ -1.37
Trim50-202ENSMUST00000111180 2310034C09RikQ9D746 214 aa6.51□□□□□ -1.37
Trim50-202ENSMUST00000111180 SnurfQ9WU12 71 aa6.47□□□□□ -1.37
Trim50-202ENSMUST00000111180 2310079G19RikQ9D6L6 185 aa6.46□□□□□ -1.38
Trim50-202ENSMUST00000111180 SmcpP15265 143 aa6.43□□□□□ -1.38
Trim50-202ENSMUST00000111180 Rnf213E9Q555 5152 aaKnown RBP6.42□□□□□ -1.38
Trim50-202ENSMUST00000111180 Gm17416Q30KP4 66 aa6.41□□□□□ -1.38
Trim50-202ENSMUST00000111180 Cdc42se1Q8BHL7 80 aa6.41□□□□□ -1.38
Trim50-202ENSMUST00000111180 Gm10061D3Z714 54 aa6.4□□□□□ -1.39
Trim50-202ENSMUST00000111180 Serp1Q9Z1W5 66 aa6.38□□□□□ -1.39
Trim50-202ENSMUST00000111180 Gm10318A0A1W2P728 225 aa6.37□□□□□ -1.39
Trim50-202ENSMUST00000111180 Smim20D3Z7Q2 69 aa6.36□□□□□ -1.39
Trim50-202ENSMUST00000111180 SptssbQ925E8 76 aa6.34□□□□□ -1.4
Trim50-202ENSMUST00000111180 Krtap4-2B1AQ85 167 aa6.33□□□□□ -1.4
Trim50-202ENSMUST00000111180 Rps28P62858 69 aaKnown RBP6.33□□□□□ -1.4
Trim50-202ENSMUST00000111180 Brk1Q91VR8 75 aa6.33□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms