RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Fbn1Q61554 2873 aaKnown RBP6.81□□□□□ -1.32
Trim9-202ENSMUST00000110522 Gm26620Q9CY65 116 aa6.8□□□□□ -1.32
Trim9-202ENSMUST00000110522 2310034C09RikQ9D746 214 aa6.79□□□□□ -1.32
Trim9-202ENSMUST00000110522 Krtap10-10A0A1W2P7T6 217 aa6.76□□□□□ -1.33
Trim9-202ENSMUST00000110522 Krtap29-1A2A5X4 342 aa6.76□□□□□ -1.33
Trim9-202ENSMUST00000110522 Gm16253D3Z167 63 aa6.74□□□□□ -1.33
Trim9-202ENSMUST00000110522 Col7a1Q63870 2944 aa6.73□□□□□ -1.33
Trim9-202ENSMUST00000110522 Gm21798J3QNU5 87 aa6.71□□□□□ -1.33
Trim9-202ENSMUST00000110522 Uqcr11Q9CPX8 56 aa6.7□□□□□ -1.34
Trim9-202ENSMUST00000110522 SmcpP15265 143 aa6.7□□□□□ -1.34
Trim9-202ENSMUST00000110522 Csmd2V9GX34 3611 aa6.7□□□□□ -1.34
Trim9-202ENSMUST00000110522 Krtap14O08640 167 aa6.7□□□□□ -1.34
Trim9-202ENSMUST00000110522 VwfQ8CIZ8 2813 aa6.69□□□□□ -1.34
Trim9-202ENSMUST00000110522 Tenm2Q9WTS5 2764 aa6.67□□□□□ -1.34
Trim9-202ENSMUST00000110522 Gm37013Q8K491 104 aa6.67□□□□□ -1.34
Trim9-202ENSMUST00000110522 Rnase13Q5GAM7 153 aa6.64□□□□□ -1.35
Trim9-202ENSMUST00000110522 Gm2696A0A1W2P709 240 aa6.62□□□□□ -1.35
Trim9-202ENSMUST00000110522 Gm4491E0CX42 125 aa6.62□□□□□ -1.35
Trim9-202ENSMUST00000110522 Gm12216A0A1W2P827 62 aa6.61□□□□□ -1.35
Trim9-202ENSMUST00000110522 Gm10643Q3URG9 111 aa6.6□□□□□ -1.35
Trim9-202ENSMUST00000110522 Krtap15-1Q9QZU5 150 aa6.56□□□□□ -1.36
Trim9-202ENSMUST00000110522 Tnp2P11378 117 aa6.53□□□□□ -1.36
Trim9-202ENSMUST00000110522 Gm2310J3QNJ2 377 aa6.53□□□□□ -1.36
Trim9-202ENSMUST00000110522 CubnQ9JLB4 3623 aa6.52□□□□□ -1.37
Trim9-202ENSMUST00000110522 Gm9821Q8K076 103 aa6.52□□□□□ -1.37
Trim9-202ENSMUST00000110522 Muc6Q80T03 2850 aa6.5□□□□□ -1.37
Trim9-202ENSMUST00000110522 Gm3880A0A1B0GSB3 72 aa6.43□□□□□ -1.38
Trim9-202ENSMUST00000110522 Gm5767A0A0J9YTU8 78 aa6.4□□□□□ -1.38
Trim9-202ENSMUST00000110522 Gm3646F6S692 53 aa6.38□□□□□ -1.39
Trim9-202ENSMUST00000110522 Ank2Q8C8R3 3898 aa6.37□□□□□ -1.39
Trim9-202ENSMUST00000110522 LystP97412 3788 aa6.37□□□□□ -1.39
Trim9-202ENSMUST00000110522 Megf8P60882 2789 aa6.36□□□□□ -1.39
Trim9-202ENSMUST00000110522 4933415A04RikQ9D443 101 aa6.34□□□□□ -1.39
Trim9-202ENSMUST00000110522 Gm9955Q8CEJ8 102 aa6.32□□□□□ -1.4
Trim9-202ENSMUST00000110522 Mp68P56379 58 aa6.27□□□□□ -1.41
Trim9-202ENSMUST00000110522 Spink7Q6IE32 76 aa6.26□□□□□ -1.41
Trim9-202ENSMUST00000110522 CriptO70333 101 aa6.23□□□□□ -1.41
Trim9-202ENSMUST00000110522 Rps29P62274 56 aa6.22□□□□□ -1.41
Trim9-202ENSMUST00000110522 Gm5965D3Z724 196 aa6.19□□□□□ -1.42
Trim9-202ENSMUST00000110522 Sec61bQ9CQS8 96 aaKnown RBP6.17□□□□□ -1.42
Trim9-202ENSMUST00000110522 D6Ertd527eA0A0N4SWI3 464 aa6.17□□□□□ -1.42
Trim9-202ENSMUST00000110522 1700042G07RikB1AUF7 90 aa6.16□□□□□ -1.42
Trim9-202ENSMUST00000110522 Xirp2Q4U4S6 3784 aa6.16□□□□□ -1.42
Trim9-202ENSMUST00000110522 Fam229aB2KGE5 128 aa6.15□□□□□ -1.43
Trim9-202ENSMUST00000110522 Cox6b2Q80ZN9 88 aa6.14□□□□□ -1.43
Trim9-202ENSMUST00000110522 Gm9918Q8BUR5 174 aa6.14□□□□□ -1.43
Trim9-202ENSMUST00000110522 Rpl37Q9D823 97 aa6.1□□□□□ -1.43
Trim9-202ENSMUST00000110522 Gm10382Q3V0T5 144 aa6.09□□□□□ -1.43
Trim9-202ENSMUST00000110522 BC029722A0A0N4SW31 51 aa6.07□□□□□ -1.44
Trim9-202ENSMUST00000110522 BsnO88737 3942 aa6.06□□□□□ -1.44
Trim9-202ENSMUST00000110522 Dnah14A0A140LIJ4 4489 aa6.05□□□□□ -1.44
Trim9-202ENSMUST00000110522 Hspg2Q05793 3707 aaKnown RBP6.04□□□□□ -1.44
Trim9-202ENSMUST00000110522 Gm9736A0A1W2P7N1 277 aa6.02□□□□□ -1.45
Trim9-202ENSMUST00000110522 2310057N15RikQ9D6T8 200 aa6□□□□□ -1.45
Trim9-202ENSMUST00000110522 Gm19426M0QWC7 77 aa6□□□□□ -1.45
Trim9-202ENSMUST00000110522 Pla2g10Q9QXX3 151 aa5.98□□□□□ -1.45
Trim9-202ENSMUST00000110522 Romo1P60603 79 aa5.97□□□□□ -1.45
Trim9-202ENSMUST00000110522 Csmd3Q80T79 3707 aa5.93□□□□□ -1.46
Trim9-202ENSMUST00000110522 2310079G19RikQ9D6L6 185 aa5.92□□□□□ -1.46
Trim9-202ENSMUST00000110522 Camk2n1Q6QWF9 78 aa5.92□□□□□ -1.46
Trim9-202ENSMUST00000110522 A930033H14RikG5E8X6 103 aa5.9□□□□□ -1.47
Trim9-202ENSMUST00000110522 Dnah10D3YYQ8 4591 aa5.85□□□□□ -1.47
Trim9-202ENSMUST00000110522 Gm20537G3UYK7 97 aa5.82□□□□□ -1.48
Trim9-202ENSMUST00000110522 Gm11939A2A592 99 aa5.8□□□□□ -1.48
Trim9-202ENSMUST00000110522 Huwe1Q7TMY8 4377 aaKnown RBP5.79□□□□□ -1.48
Trim9-202ENSMUST00000110522 Krtap19-5O08632 62 aa5.78□□□□□ -1.48
Trim9-202ENSMUST00000110522 Gm17416Q30KP4 66 aa5.67□□□□□ -1.5
Trim9-202ENSMUST00000110522 Dnah7bL7N1Y0 4068 aa5.67□□□□□ -1.5
Trim9-202ENSMUST00000110522 Krtap3-2Q9D638 99 aa5.66□□□□□ -1.5
Trim9-202ENSMUST00000110522 Krtap3-3Q9D7P0 99 aa5.66□□□□□ -1.5
Trim9-202ENSMUST00000110522 Dnah5Q8VHE6 4621 aa5.64□□□□□ -1.51
Trim9-202ENSMUST00000110522 PlecQ9QXS1 4691 aaKnown RBP5.64□□□□□ -1.51
Trim9-202ENSMUST00000110522 Gm10318A0A1W2P728 225 aa5.63□□□□□ -1.51
Trim9-202ENSMUST00000110522 Gm20538F6Z9R1 75 aa5.63□□□□□ -1.51
Trim9-202ENSMUST00000110522 Dnah17Q69Z23 4481 aa5.61□□□□□ -1.51
Trim9-202ENSMUST00000110522 Gm21887J3QQ04 176 aa5.6□□□□□ -1.51
Trim9-202ENSMUST00000110522 2210017I01RikA0A0A6YVV1 95 aa5.6□□□□□ -1.51
Trim9-202ENSMUST00000110522 B930094E09RikQ8C4T2 136 aa5.57□□□□□ -1.52
Trim9-202ENSMUST00000110522 Dnah11E9Q7N9 4488 aa5.55□□□□□ -1.52
Trim9-202ENSMUST00000110522 Vps13dB1ART2 4390 aa5.54□□□□□ -1.52
Trim9-202ENSMUST00000110522 Crct1Q6PAI5 102 aa5.54□□□□□ -1.52
Trim9-202ENSMUST00000110522 Stard9Q80TF6 4561 aa5.53□□□□□ -1.52
Trim9-202ENSMUST00000110522 Dnah9B1AR51 4484 aa5.52□□□□□ -1.53
Trim9-202ENSMUST00000110522 Ryr1E9PZQ0 5035 aa5.47□□□□□ -1.53
Trim9-202ENSMUST00000110522 Krtap13-1Q8K198 168 aa5.46□□□□□ -1.54
Trim9-202ENSMUST00000110522 TnxbO35452 4006 aa5.43□□□□□ -1.54
Trim9-202ENSMUST00000110522 Ndufaf8A2AMZ4 74 aa5.42□□□□□ -1.54
Trim9-202ENSMUST00000110522 Kmt2aP55200 3966 aa5.41□□□□□ -1.54
Trim9-202ENSMUST00000110522 PrkdcP97313 4128 aa5.4□□□□□ -1.55
Trim9-202ENSMUST00000110522 Krtap3-1A2A591 98 aa5.38□□□□□ -1.55
Trim9-202ENSMUST00000110522 Lrp1bQ9JI18 4599 aa5.37□□□□□ -1.55
Trim9-202ENSMUST00000110522 Dync2h1Q45VK7 4306 aa5.34□□□□□ -1.55
Trim9-202ENSMUST00000110522 Ryr3A2AGL3 4863 aa5.33□□□□□ -1.56
Trim9-202ENSMUST00000110522 Dnah6E9Q0B6 4144 aa5.32□□□□□ -1.56
Trim9-202ENSMUST00000110522 ApobE9Q414 4505 aa5.32□□□□□ -1.56
Trim9-202ENSMUST00000110522 Dnah3Q8BW94 4083 aa5.3□□□□□ -1.56
Trim9-202ENSMUST00000110522 Mycbp2Q7TPH6 4711 aa5.3□□□□□ -1.56
Trim9-202ENSMUST00000110522 Gm40193A0A1B0GT39 78 aa5.29□□□□□ -1.56
Trim9-202ENSMUST00000110522 Tnp1P10856 55 aa5.28□□□□□ -1.56
Trim9-202ENSMUST00000110522 Dync1h1Q9JHU4 4644 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms