RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Igkv3-3A0A140T8Q0 119 aa6.91□□□□□ -1.3
Vps54-202ENSMUST00000109578 Q8K1L6 76 aa6.91□□□□□ -1.3
Vps54-202ENSMUST00000109578 1600014C23RikQ9DAX4 101 aa6.91□□□□□ -1.3
Vps54-202ENSMUST00000109578 Krtap29-1A2A5X4 342 aa6.9□□□□□ -1.3
Vps54-202ENSMUST00000109578 4933415A04RikQ9D443 101 aa6.89□□□□□ -1.31
Vps54-202ENSMUST00000109578 Gm9918Q8BUR5 174 aa6.88□□□□□ -1.31
Vps54-202ENSMUST00000109578 Gm4707V9GXN5 68 aa6.88□□□□□ -1.31
Vps54-202ENSMUST00000109578 Dnah7aE9Q0T8 4024 aa6.86□□□□□ -1.31
Vps54-202ENSMUST00000109578 Krtap10-4Q08EG8 221 aa6.85□□□□□ -1.31
Vps54-202ENSMUST00000109578 NbdyA0A0N4SUI7 68 aa6.84□□□□□ -1.31
Vps54-202ENSMUST00000109578 Cypt14J3QPF7 87 aa6.84□□□□□ -1.31
Vps54-202ENSMUST00000109578 Gm20661K7N787 53 aa6.82□□□□□ -1.32
Vps54-202ENSMUST00000109578 Gm16253D3Z167 63 aa6.82□□□□□ -1.32
Vps54-202ENSMUST00000109578 Stard9Q80TF6 4561 aa6.8□□□□□ -1.32
Vps54-202ENSMUST00000109578 Krtap14O08640 167 aa6.8□□□□□ -1.32
Vps54-202ENSMUST00000109578 Znf706Q9D115 76 aaKnown RBP6.8□□□□□ -1.32
Vps54-202ENSMUST00000109578 Defb39Q70KL3 74 aa6.79□□□□□ -1.32
Vps54-202ENSMUST00000109578 Hectd4E9Q2E4 4418 aa6.78□□□□□ -1.32
Vps54-202ENSMUST00000109578 2310050C09RikG5E8Z3 280 aa6.78□□□□□ -1.32
Vps54-202ENSMUST00000109578 Sox16Q62247 57 aa6.78□□□□□ -1.32
Vps54-202ENSMUST00000109578 Gm21798J3QNU5 87 aa6.78□□□□□ -1.32
Vps54-202ENSMUST00000109578 SptssbQ925E8 76 aa6.77□□□□□ -1.33
Vps54-202ENSMUST00000109578 FcgbpE9Q0B5 2583 aa6.77□□□□□ -1.33
Vps54-202ENSMUST00000109578 Defb13Q8R2I4 64 aa6.77□□□□□ -1.33
Vps54-202ENSMUST00000109578 Krtap13O88375 197 aa6.76□□□□□ -1.33
Vps54-202ENSMUST00000109578 Tnp2P11378 117 aa6.75□□□□□ -1.33
Vps54-202ENSMUST00000109578 Ly6g6cQ9Z1Q4 126 aa6.75□□□□□ -1.33
Vps54-202ENSMUST00000109578 Wfdc3Q14AE4 130 aa6.75□□□□□ -1.33
Vps54-202ENSMUST00000109578 Spaca4Q80ZQ0 127 aa6.74□□□□□ -1.33
Vps54-202ENSMUST00000109578 Gpr15lA0A0B4J1N3 78 aa6.74□□□□□ -1.33
Vps54-202ENSMUST00000109578 Vps13dB1ART2 4390 aa6.74□□□□□ -1.33
Vps54-202ENSMUST00000109578 Cypt15B1AXS0 87 aa6.71□□□□□ -1.34
Vps54-202ENSMUST00000109578 Ccdc179J3QM76 67 aa6.71□□□□□ -1.34
Vps54-202ENSMUST00000109578 Pkd1O08852 4293 aa6.71□□□□□ -1.34
Vps54-202ENSMUST00000109578 Lrp1bQ9JI18 4599 aa6.7□□□□□ -1.34
Vps54-202ENSMUST00000109578 Dnah2P0C6F1 4456 aa6.69□□□□□ -1.34
Vps54-202ENSMUST00000109578 9230102O04RikA2ASX7 82 aa6.67□□□□□ -1.34
Vps54-202ENSMUST00000109578 Krtap10-10A0A1W2P7T6 217 aa6.65□□□□□ -1.34
Vps54-202ENSMUST00000109578 Ndufb1P0DN34 57 aa6.64□□□□□ -1.35
Vps54-202ENSMUST00000109578 Gm10999F6Q4M4 69 aa6.64□□□□□ -1.35
Vps54-202ENSMUST00000109578 Gm3646F6S692 53 aa6.64□□□□□ -1.35
Vps54-202ENSMUST00000109578 Gm10643Q3URG9 111 aa6.61□□□□□ -1.35
Vps54-202ENSMUST00000109578 ApobE9Q414 4505 aa6.58□□□□□ -1.36
Vps54-202ENSMUST00000109578 Gm2696A0A1W2P709 240 aa6.58□□□□□ -1.36
Vps54-202ENSMUST00000109578 Defb1P56386 69 aa6.58□□□□□ -1.36
Vps54-202ENSMUST00000109578 Defb11Q8R2I7 77 aa6.57□□□□□ -1.36
Vps54-202ENSMUST00000109578 Q8BGJ3 129 aa6.57□□□□□ -1.36
Vps54-202ENSMUST00000109578 Pkhd1E9PZ36 4059 aa6.57□□□□□ -1.36
Vps54-202ENSMUST00000109578 Sec61gP60060 68 aa6.57□□□□□ -1.36
Vps54-202ENSMUST00000109578 Uqcr11Q9CPX8 56 aa6.55□□□□□ -1.36
Vps54-202ENSMUST00000109578 Limd2Q8BGB5 128 aa6.55□□□□□ -1.36
Vps54-202ENSMUST00000109578 2310034C09RikQ9D746 214 aa6.54□□□□□ -1.36
Vps54-202ENSMUST00000109578 Gm26620Q9CY65 116 aa6.54□□□□□ -1.36
Vps54-202ENSMUST00000109578 1700042G07RikB1AUF7 90 aa6.53□□□□□ -1.36
Vps54-202ENSMUST00000109578 Ndufs5Q99LY9 106 aa6.52□□□□□ -1.37
Vps54-202ENSMUST00000109578 2310079G19RikQ9D6L6 185 aa6.47□□□□□ -1.37
Vps54-202ENSMUST00000109578 Krtap3-2Q9D638 99 aa6.45□□□□□ -1.38
Vps54-202ENSMUST00000109578 Krtap3-3Q9D7P0 99 aa6.45□□□□□ -1.38
Vps54-202ENSMUST00000109578 Fat1A0A1L1SQU7 4645 aa6.41□□□□□ -1.38
Vps54-202ENSMUST00000109578 Fat2Q5F226 4351 aa6.41□□□□□ -1.38
Vps54-202ENSMUST00000109578 RetnlbQ99P86 105 aa6.39□□□□□ -1.39
Vps54-202ENSMUST00000109578 SacsQ9JLC8 4582 aa6.39□□□□□ -1.39
Vps54-202ENSMUST00000109578 Gm4491E0CX42 125 aa6.35□□□□□ -1.39
Vps54-202ENSMUST00000109578 4930507D05RikQ8C9C9 103 aa6.34□□□□□ -1.39
Vps54-202ENSMUST00000109578 D6Ertd527eA0A0N4SWI3 464 aa6.34□□□□□ -1.39
Vps54-202ENSMUST00000109578 A930033H14RikG5E8X6 103 aa6.34□□□□□ -1.39
Vps54-202ENSMUST00000109578 Vps13bQ80TY5 3993 aa6.33□□□□□ -1.4
Vps54-202ENSMUST00000109578 Ryr3A2AGL3 4863 aa6.33□□□□□ -1.4
Vps54-202ENSMUST00000109578 Dync1h1Q9JHU4 4644 aaKnown RBP6.31□□□□□ -1.4
Vps54-202ENSMUST00000109578 Gm9821Q8K076 103 aa6.3□□□□□ -1.4
Vps54-202ENSMUST00000109578 Lrp1Q91ZX7 4545 aaKnown RBP6.29□□□□□ -1.4
Vps54-202ENSMUST00000109578 Gm11939A2A592 99 aa6.29□□□□□ -1.4
Vps54-202ENSMUST00000109578 Pkhd1l1Q80ZA4 4249 aa6.27□□□□□ -1.41
Vps54-202ENSMUST00000109578 OxtP35454 125 aa6.24□□□□□ -1.41
Vps54-202ENSMUST00000109578 Rps29P62274 56 aa6.16□□□□□ -1.42
Vps54-202ENSMUST00000109578 Gm20537G3UYK7 97 aa6.13□□□□□ -1.43
Vps54-202ENSMUST00000109578 Cox6b2Q80ZN9 88 aa6.13□□□□□ -1.43
Vps54-202ENSMUST00000109578 Gm3880A0A1B0GSB3 72 aa6.12□□□□□ -1.43
Vps54-202ENSMUST00000109578 Pla2g10Q9QXX3 151 aa6.11□□□□□ -1.43
Vps54-202ENSMUST00000109578 Gm9736A0A1W2P7N1 277 aa6.09□□□□□ -1.43
Vps54-202ENSMUST00000109578 Kmt2cQ8BRH4 4903 aa6.08□□□□□ -1.44
Vps54-202ENSMUST00000109578 Mycbp2Q7TPH6 4711 aa6.08□□□□□ -1.44
Vps54-202ENSMUST00000109578 Gm5767A0A0J9YTU8 78 aa6.06□□□□□ -1.44
Vps54-202ENSMUST00000109578 Abca13Q5SSE9 5034 aa6.02□□□□□ -1.45
Vps54-202ENSMUST00000109578 Fat3Q8BNA6 4555 aa6□□□□□ -1.45
Vps54-202ENSMUST00000109578 Gm10382Q3V0T5 144 aa6□□□□□ -1.45
Vps54-202ENSMUST00000109578 Krtap19-5O08632 62 aa5.99□□□□□ -1.45
Vps54-202ENSMUST00000109578 Gm5965D3Z724 196 aa5.99□□□□□ -1.45
Vps54-202ENSMUST00000109578 Krtap15-1Q9QZU5 150 aa5.99□□□□□ -1.45
Vps54-202ENSMUST00000109578 CriptO70333 101 aa5.97□□□□□ -1.45
Vps54-202ENSMUST00000109578 Ryr2E9Q401 4966 aaKnown RBP5.96□□□□□ -1.46
Vps54-202ENSMUST00000109578 Rnase13Q5GAM7 153 aa5.94□□□□□ -1.46
Vps54-202ENSMUST00000109578 Gm12216A0A1W2P827 62 aa5.93□□□□□ -1.46
Vps54-202ENSMUST00000109578 Gm17606F6ZL36 78 aa5.92□□□□□ -1.46
Vps54-202ENSMUST00000109578 Gm9955Q8CEJ8 102 aa5.91□□□□□ -1.46
Vps54-202ENSMUST00000109578 Dnah8Q91XQ0 4731 aa5.88□□□□□ -1.47
Vps54-202ENSMUST00000109578 Rpl37Q9D823 97 aa5.87□□□□□ -1.47
Vps54-202ENSMUST00000109578 Ryr1E9PZQ0 5035 aa5.82□□□□□ -1.48
Vps54-202ENSMUST00000109578 Krtap3-1A2A591 98 aa5.79□□□□□ -1.48
Vps54-202ENSMUST00000109578 Romo1P60603 79 aa5.74□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 105.9 ms