RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Gm2696A0A1W2P709 240 aa5.43□□□□□ -1.54
Vcan-202ENSMUST00000109544 2210017I01RikA0A0A6YVV1 95 aa5.42□□□□□ -1.54
Vcan-202ENSMUST00000109544 Vps13aQ5H8C4 3166 aa5.38□□□□□ -1.55
Vcan-202ENSMUST00000109544 Utp20Q5XG71 2788 aaKnown RBP5.37□□□□□ -1.55
Vcan-202ENSMUST00000109544 4933428G20RikQ9D3X4 101 aa5.37□□□□□ -1.55
Vcan-202ENSMUST00000109544 Wdfy4E9Q2M9 3149 aa5.36□□□□□ -1.55
Vcan-202ENSMUST00000109544 AspmQ8CJ27 3122 aa5.36□□□□□ -1.55
Vcan-202ENSMUST00000109544 Srrm2Q8BTI8 2703 aaKnown RBP5.35□□□□□ -1.55
Vcan-202ENSMUST00000109544 AtmQ62388 3066 aa5.35□□□□□ -1.55
Vcan-202ENSMUST00000109544 Lrrc37aB1AWG4 3215 aa5.35□□□□□ -1.55
Vcan-202ENSMUST00000109544 BptfA2A654 3036 aaKnown RBP5.35□□□□□ -1.55
Vcan-202ENSMUST00000109544 NbeaQ9EPN1 2936 aa5.34□□□□□ -1.56
Vcan-202ENSMUST00000109544 Celsr1O35161 3034 aa5.31□□□□□ -1.56
Vcan-202ENSMUST00000109544 FlncQ8VHX6 2726 aaKnown RBP5.3□□□□□ -1.56
Vcan-202ENSMUST00000109544 Dmxl2Q8BPN8 3032 aa5.28□□□□□ -1.56
Vcan-202ENSMUST00000109544 FrylF8VQ05 3007 aa5.27□□□□□ -1.57
Vcan-202ENSMUST00000109544 Adgrg4B7ZCC9 3073 aa5.26□□□□□ -1.57
Vcan-202ENSMUST00000109544 DspE9Q557 2883 aaKnown RBP5.26□□□□□ -1.57
Vcan-202ENSMUST00000109544 Lama1P19137 3084 aa5.26□□□□□ -1.57
Vcan-202ENSMUST00000109544 Tex15F8VPN2 2785 aa5.25□□□□□ -1.57
Vcan-202ENSMUST00000109544 ApcQ61315 2845 aa5.24□□□□□ -1.57
Vcan-202ENSMUST00000109544 Unc80Q8BLN6 3261 aa5.23□□□□□ -1.57
Vcan-202ENSMUST00000109544 Zzef1Q5SSH7 2924 aa5.21□□□□□ -1.58
Vcan-202ENSMUST00000109544 Gm19668J3QMD1 248 aa5.19□□□□□ -1.58
Vcan-202ENSMUST00000109544 Celsr3Q91ZI0 3301 aa5.15□□□□□ -1.59
Vcan-202ENSMUST00000109544 Tenm3Q9WTS6 2715 aa5.14□□□□□ -1.59
Vcan-202ENSMUST00000109544 Frem2Q6NVD0 3160 aa5.13□□□□□ -1.59
Vcan-202ENSMUST00000109544 Trank1Q8BV79 2999 aa5.12□□□□□ -1.59
Vcan-202ENSMUST00000109544 Celsr2Q9R0M0 2920 aa5.11□□□□□ -1.59
Vcan-202ENSMUST00000109544 Col6a3E9PWQ3 3284 aa5.1□□□□□ -1.59
Vcan-202ENSMUST00000109544 Chd9Q8BYH8 2885 aa5.09□□□□□ -1.59
Vcan-202ENSMUST00000109544 Nf1Q04690 2841 aa5.08□□□□□ -1.6
Vcan-202ENSMUST00000109544 Dchs2A0A0A6YW72 3346 aa5.05□□□□□ -1.6
Vcan-202ENSMUST00000109544 Pdzd2E9Q1M1 2796 aa5.05□□□□□ -1.6
Vcan-202ENSMUST00000109544 Brca2P97929 3329 aa5.05□□□□□ -1.6
Vcan-202ENSMUST00000109544 Gm11939A2A592 99 aa5.02□□□□□ -1.61
Vcan-202ENSMUST00000109544 Gm9736A0A1W2P7N1 277 aa4.98□□□□□ -1.61
Vcan-202ENSMUST00000109544 Gm9918Q8BUR5 174 aa4.98□□□□□ -1.61
Vcan-202ENSMUST00000109544 Megf8P60882 2789 aa4.97□□□□□ -1.61
Vcan-202ENSMUST00000109544 Krtap13-1Q8K198 168 aa4.96□□□□□ -1.62
Vcan-202ENSMUST00000109544 Wdfy3Q6VNB8 3508 aa4.95□□□□□ -1.62
Vcan-202ENSMUST00000109544 LrbaQ9ESE1 2856 aa4.94□□□□□ -1.62
Vcan-202ENSMUST00000109544 VcanQ62059 3357 aa4.93□□□□□ -1.62
Vcan-202ENSMUST00000109544 Krtap3-1A2A591 98 aa4.93□□□□□ -1.62
Vcan-202ENSMUST00000109544 Tenm1Q9WTS4 2731 aa4.92□□□□□ -1.62
Vcan-202ENSMUST00000109544 Krtap3-2Q9D638 99 aa4.9□□□□□ -1.63
Vcan-202ENSMUST00000109544 Krtap3-3Q9D7P0 99 aa4.9□□□□□ -1.63
Vcan-202ENSMUST00000109544 RelnQ60841 3461 aa4.86□□□□□ -1.63
Vcan-202ENSMUST00000109544 Helz2E9QAM5 2947 aaKnown RBP4.83□□□□□ -1.64
Vcan-202ENSMUST00000109544 SpegQ62407 3262 aa4.83□□□□□ -1.64
Vcan-202ENSMUST00000109544 Dchs1E9PVD3 3291 aa4.83□□□□□ -1.64
Vcan-202ENSMUST00000109544 Tenm2Q9WTS5 2764 aa4.82□□□□□ -1.64
Vcan-202ENSMUST00000109544 Csmd2V9GX34 3611 aa4.82□□□□□ -1.64
Vcan-202ENSMUST00000109544 Vps13cQ8BX70 3748 aa4.81□□□□□ -1.64
Vcan-202ENSMUST00000109544 OtogO55225 2910 aa4.78□□□□□ -1.64
Vcan-202ENSMUST00000109544 Krtap19-5O08632 62 aa4.77□□□□□ -1.65
Vcan-202ENSMUST00000109544 DmdP11531 3678 aa4.74□□□□□ -1.65
Vcan-202ENSMUST00000109544 Myo15aQ9QZZ4 3511 aa4.73□□□□□ -1.65
Vcan-202ENSMUST00000109544 Akap9Q70FJ1 3797 aa4.72□□□□□ -1.65
Vcan-202ENSMUST00000109544 Sprr2a3Q4KL71 83 aa4.66□□□□□ -1.66
Vcan-202ENSMUST00000109544 Sprr2a1Q9CQK8 83 aa4.66□□□□□ -1.66
Vcan-202ENSMUST00000109544 Muc5acE9QAQ8 3455 aa4.65□□□□□ -1.66
Vcan-202ENSMUST00000109544 Gm10318A0A1W2P728 225 aa4.65□□□□□ -1.67
Vcan-202ENSMUST00000109544 Gm18596A0A1W2P860 280 aa4.64□□□□□ -1.67
Vcan-202ENSMUST00000109544 Fbn1Q61554 2873 aaKnown RBP4.64□□□□□ -1.67
Vcan-202ENSMUST00000109544 Krtap7-1Q9D3I6 87 aa4.63□□□□□ -1.67
Vcan-202ENSMUST00000109544 Zfhx4Q9JJN2 3550 aa4.61□□□□□ -1.67
Vcan-202ENSMUST00000109544 Krtap1-5A2A590 122 aa4.6□□□□□ -1.67
Vcan-202ENSMUST00000109544 Crct1Q6PAI5 102 aa4.58□□□□□ -1.68
Vcan-202ENSMUST00000109544 VwfQ8CIZ8 2813 aa4.57□□□□□ -1.68
Vcan-202ENSMUST00000109544 Ank2Q8C8R3 3898 aa4.57□□□□□ -1.68
Vcan-202ENSMUST00000109544 Gm6358A0A087WPH4 74 aa4.54□□□□□ -1.68
Vcan-202ENSMUST00000109544 Col7a1Q63870 2944 aa4.54□□□□□ -1.68
Vcan-202ENSMUST00000109544 Lama5Q61001 3718 aa4.53□□□□□ -1.68
Vcan-202ENSMUST00000109544 Krtap19-9aF8WH65 55 aa4.53□□□□□ -1.68
Vcan-202ENSMUST00000109544 Smg1Q8BKX6 3658 aaKnown RBP4.51□□□□□ -1.69
Vcan-202ENSMUST00000109544 Krtap19-9bQ99NG9 58 aa4.5□□□□□ -1.69
Vcan-202ENSMUST00000109544 Csmd1Q923L3 3564 aa4.5□□□□□ -1.69
Vcan-202ENSMUST00000109544 SpenQ62504 3644 aaKnown RBP4.49□□□□□ -1.69
Vcan-202ENSMUST00000109544 Muc6Q80T03 2850 aa4.46□□□□□ -1.7
Vcan-202ENSMUST00000109544 Krtap8-1O08633 61 aa4.45□□□□□ -1.7
Vcan-202ENSMUST00000109544 Krtap1-4Q3V2D6 188 aa4.42□□□□□ -1.7
Vcan-202ENSMUST00000109544 Gm884A2A9H6 3643 aa4.41□□□□□ -1.7
Vcan-202ENSMUST00000109544 Lce1mQ9CR91 182 aa4.4□□□□□ -1.71
Vcan-202ENSMUST00000109544 TnxbO35452 4006 aa4.35□□□□□ -1.71
Vcan-202ENSMUST00000109544 Muc4Q8JZM8 3443 aa4.32□□□□□ -1.72
Vcan-202ENSMUST00000109544 Krtap12-1Q9Z287 130 aa4.31□□□□□ -1.72
Vcan-202ENSMUST00000109544 Svep1A2AVA0 3567 aa4.25□□□□□ -1.73
Vcan-202ENSMUST00000109544 Dnah14A0A140LIJ4 4489 aa4.23□□□□□ -1.73
Vcan-202ENSMUST00000109544 Cmya5Q70KF4 3739 aa4.23□□□□□ -1.73
Vcan-202ENSMUST00000109544 Huwe1Q7TMY8 4377 aaKnown RBP4.22□□□□□ -1.73
Vcan-202ENSMUST00000109544 Sprr2kO70562 68 aa4.21□□□□□ -1.74
Vcan-202ENSMUST00000109544 Gm19402J3QJV4 266 aa4.2□□□□□ -1.74
Vcan-202ENSMUST00000109544 Prm1P02319 51 aa4.17□□□□□ -1.74
Vcan-202ENSMUST00000109544 Dnah17Q69Z23 4481 aa4.15□□□□□ -1.75
Vcan-202ENSMUST00000109544 Vps13dB1ART2 4390 aa4.12□□□□□ -1.75
Vcan-202ENSMUST00000109544 Dnah5Q8VHE6 4621 aa4.1□□□□□ -1.75
Vcan-202ENSMUST00000109544 LorP18165 486 aa4.09□□□□□ -1.75
Vcan-202ENSMUST00000109544 Stard9Q80TF6 4561 aa4.08□□□□□ -1.76
Vcan-202ENSMUST00000109544 Ryr1E9PZQ0 5035 aa4.08□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms