RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 6030445D17RikE9Q8F9 148 aa6.39□□□□□ -1.39
Tro-201ENSMUST00000087253 Gm4707V9GXN5 68 aa6.39□□□□□ -1.39
Tro-201ENSMUST00000087253 Gm20661K7N787 53 aa6.38□□□□□ -1.39
Tro-201ENSMUST00000087253 Gm9918Q8BUR5 174 aa6.38□□□□□ -1.39
Tro-201ENSMUST00000087253 Gm27235Q3UW50 83 aa6.37□□□□□ -1.39
Tro-201ENSMUST00000087253 Sec61gP60060 68 aa6.36□□□□□ -1.39
Tro-201ENSMUST00000087253 Adm2Q7TNK8 150 aa6.33□□□□□ -1.4
Tro-201ENSMUST00000087253 Vps13dB1ART2 4390 aa6.32□□□□□ -1.4
Tro-201ENSMUST00000087253 Q8K1L6 76 aa6.3□□□□□ -1.4
Tro-201ENSMUST00000087253 Dnah2P0C6F1 4456 aa6.3□□□□□ -1.4
Tro-201ENSMUST00000087253 1600014C23RikQ9DAX4 101 aa6.29□□□□□ -1.4
Tro-201ENSMUST00000087253 Defb13Q8R2I4 64 aa6.28□□□□□ -1.4
Tro-201ENSMUST00000087253 Gm9507D3Z5T3 223 aa6.27□□□□□ -1.41
Tro-201ENSMUST00000087253 Gm21798J3QNU5 87 aa6.26□□□□□ -1.41
Tro-201ENSMUST00000087253 Ndufb1P0DN34 57 aa6.25□□□□□ -1.41
Tro-201ENSMUST00000087253 Wfdc3Q14AE4 130 aa6.25□□□□□ -1.41
Tro-201ENSMUST00000087253 Gm3646F6S692 53 aa6.24□□□□□ -1.41
Tro-201ENSMUST00000087253 ApobE9Q414 4505 aa6.23□□□□□ -1.41
Tro-201ENSMUST00000087253 Defb39Q70KL3 74 aa6.23□□□□□ -1.41
Tro-201ENSMUST00000087253 Defb11Q8R2I7 77 aa6.23□□□□□ -1.41
Tro-201ENSMUST00000087253 Gm10065F6TJM2 114 aa6.22□□□□□ -1.41
Tro-201ENSMUST00000087253 Ccdc179J3QM76 67 aa6.22□□□□□ -1.41
Tro-201ENSMUST00000087253 Cypt14J3QPF7 87 aa6.21□□□□□ -1.41
Tro-201ENSMUST00000087253 Znf706Q9D115 76 aaKnown RBP6.21□□□□□ -1.41
Tro-201ENSMUST00000087253 Pkd1O08852 4293 aa6.21□□□□□ -1.42
Tro-201ENSMUST00000087253 Ndufs5Q99LY9 106 aa6.21□□□□□ -1.42
Tro-201ENSMUST00000087253 Krtap29-1A2A5X4 342 aa6.2□□□□□ -1.42
Tro-201ENSMUST00000087253 Gm16253D3Z167 63 aa6.2□□□□□ -1.42
Tro-201ENSMUST00000087253 Hectd4E9Q2E4 4418 aa6.19□□□□□ -1.42
Tro-201ENSMUST00000087253 Spaca4Q80ZQ0 127 aa6.18□□□□□ -1.42
Tro-201ENSMUST00000087253 NbdyA0A0N4SUI7 68 aa6.18□□□□□ -1.42
Tro-201ENSMUST00000087253 1700042G07RikB1AUF7 90 aa6.18□□□□□ -1.42
Tro-201ENSMUST00000087253 Gm26620Q9CY65 116 aa6.18□□□□□ -1.42
Tro-201ENSMUST00000087253 Gm10999F6Q4M4 69 aa6.16□□□□□ -1.42
Tro-201ENSMUST00000087253 Cypt15B1AXS0 87 aa6.15□□□□□ -1.43
Tro-201ENSMUST00000087253 Dnah5Q8VHE6 4621 aa6.15□□□□□ -1.43
Tro-201ENSMUST00000087253 2310050C09RikG5E8Z3 280 aa6.14□□□□□ -1.43
Tro-201ENSMUST00000087253 Defb1P56386 69 aa6.14□□□□□ -1.43
Tro-201ENSMUST00000087253 Gm10643Q3URG9 111 aa6.14□□□□□ -1.43
Tro-201ENSMUST00000087253 Krtap10-4Q08EG8 221 aa6.13□□□□□ -1.43
Tro-201ENSMUST00000087253 Krtap13O88375 197 aa6.13□□□□□ -1.43
Tro-201ENSMUST00000087253 Pkhd1E9PZ36 4059 aa6.13□□□□□ -1.43
Tro-201ENSMUST00000087253 Krtap14O08640 167 aa6.12□□□□□ -1.43
Tro-201ENSMUST00000087253 Limd2Q8BGB5 128 aa6.12□□□□□ -1.43
Tro-201ENSMUST00000087253 Uqcr11Q9CPX8 56 aa6.11□□□□□ -1.43
Tro-201ENSMUST00000087253 Gpr15lA0A0B4J1N3 78 aa6.08□□□□□ -1.44
Tro-201ENSMUST00000087253 Q8BGJ3 129 aa6.08□□□□□ -1.44
Tro-201ENSMUST00000087253 Ly6g6cQ9Z1Q4 126 aa6.08□□□□□ -1.44
Tro-201ENSMUST00000087253 FcgbpE9Q0B5 2583 aa6.07□□□□□ -1.44
Tro-201ENSMUST00000087253 Pkhd1l1Q80ZA4 4249 aa6.07□□□□□ -1.44
Tro-201ENSMUST00000087253 Tnp2P11378 117 aa6.06□□□□□ -1.44
Tro-201ENSMUST00000087253 2310034C09RikQ9D746 214 aa6.04□□□□□ -1.44
Tro-201ENSMUST00000087253 Dync1h1Q9JHU4 4644 aaKnown RBP6.02□□□□□ -1.45
Tro-201ENSMUST00000087253 Stard9Q80TF6 4561 aa5.99□□□□□ -1.45
Tro-201ENSMUST00000087253 Fat1A0A1L1SQU7 4645 aa5.99□□□□□ -1.45
Tro-201ENSMUST00000087253 Gm9821Q8K076 103 aa5.98□□□□□ -1.45
Tro-201ENSMUST00000087253 Fat2Q5F226 4351 aa5.97□□□□□ -1.45
Tro-201ENSMUST00000087253 Krtap10-10A0A1W2P7T6 217 aa5.96□□□□□ -1.46
Tro-201ENSMUST00000087253 SacsQ9JLC8 4582 aa5.96□□□□□ -1.46
Tro-201ENSMUST00000087253 Lrp1bQ9JI18 4599 aa5.95□□□□□ -1.46
Tro-201ENSMUST00000087253 OxtP35454 125 aa5.95□□□□□ -1.46
Tro-201ENSMUST00000087253 Vps13bQ80TY5 3993 aa5.92□□□□□ -1.46
Tro-201ENSMUST00000087253 2310079G19RikQ9D6L6 185 aa5.9□□□□□ -1.47
Tro-201ENSMUST00000087253 Gm2696A0A1W2P709 240 aa5.87□□□□□ -1.47
Tro-201ENSMUST00000087253 4930507D05RikQ8C9C9 103 aa5.87□□□□□ -1.47
Tro-201ENSMUST00000087253 Ryr2E9Q401 4966 aaKnown RBP5.86□□□□□ -1.47
Tro-201ENSMUST00000087253 Gm4491E0CX42 125 aa5.83□□□□□ -1.48
Tro-201ENSMUST00000087253 Ryr3A2AGL3 4863 aa5.81□□□□□ -1.48
Tro-201ENSMUST00000087253 D6Ertd527eA0A0N4SWI3 464 aa5.81□□□□□ -1.48
Tro-201ENSMUST00000087253 Krtap3-2Q9D638 99 aa5.81□□□□□ -1.48
Tro-201ENSMUST00000087253 Krtap3-3Q9D7P0 99 aa5.81□□□□□ -1.48
Tro-201ENSMUST00000087253 RetnlbQ99P86 105 aa5.8□□□□□ -1.48
Tro-201ENSMUST00000087253 Gm3880A0A1B0GSB3 72 aa5.76□□□□□ -1.49
Tro-201ENSMUST00000087253 A930033H14RikG5E8X6 103 aa5.75□□□□□ -1.49
Tro-201ENSMUST00000087253 Kmt2cQ8BRH4 4903 aa5.75□□□□□ -1.49
Tro-201ENSMUST00000087253 Pla2g10Q9QXX3 151 aa5.7□□□□□ -1.5
Tro-201ENSMUST00000087253 Gm12216A0A1W2P827 62 aa5.69□□□□□ -1.5
Tro-201ENSMUST00000087253 Gm20537G3UYK7 97 aa5.68□□□□□ -1.5
Tro-201ENSMUST00000087253 Dnah8Q91XQ0 4731 aa5.66□□□□□ -1.5
Tro-201ENSMUST00000087253 Ryr1E9PZQ0 5035 aa5.66□□□□□ -1.5
Tro-201ENSMUST00000087253 CriptO70333 101 aa5.65□□□□□ -1.5
Tro-201ENSMUST00000087253 Gm11939A2A592 99 aa5.64□□□□□ -1.51
Tro-201ENSMUST00000087253 Rps29P62274 56 aa5.63□□□□□ -1.51
Tro-201ENSMUST00000087253 Cox6b2Q80ZN9 88 aa5.62□□□□□ -1.51
Tro-201ENSMUST00000087253 Fat3Q8BNA6 4555 aa5.61□□□□□ -1.51
Tro-201ENSMUST00000087253 Dnhd1D3Z2X2 4750 aa5.55□□□□□ -1.52
Tro-201ENSMUST00000087253 Lrp1Q91ZX7 4545 aaKnown RBP5.54□□□□□ -1.52
Tro-201ENSMUST00000087253 Krtap19-5O08632 62 aa5.53□□□□□ -1.52
Tro-201ENSMUST00000087253 Gm10382Q3V0T5 144 aa5.53□□□□□ -1.52
Tro-201ENSMUST00000087253 Gm17606F6ZL36 78 aa5.51□□□□□ -1.53
Tro-201ENSMUST00000087253 Gm21887J3QQ04 176 aa5.5□□□□□ -1.53
Tro-201ENSMUST00000087253 Gm9955Q8CEJ8 102 aa5.5□□□□□ -1.53
Tro-201ENSMUST00000087253 Gm5767A0A0J9YTU8 78 aa5.49□□□□□ -1.53
Tro-201ENSMUST00000087253 Gm9736A0A1W2P7N1 277 aa5.46□□□□□ -1.54
Tro-201ENSMUST00000087253 Krtap15-1Q9QZU5 150 aa5.46□□□□□ -1.54
Tro-201ENSMUST00000087253 Rnase13Q5GAM7 153 aa5.45□□□□□ -1.54
Tro-201ENSMUST00000087253 Abca13Q5SSE9 5034 aa5.43□□□□□ -1.54
Tro-201ENSMUST00000087253 Romo1P60603 79 aa5.41□□□□□ -1.54
Tro-201ENSMUST00000087253 Birc6O88738 4882 aa5.41□□□□□ -1.54
Tro-201ENSMUST00000087253 Gm5965D3Z724 196 aa5.4□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms