RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Gm17521F6QAC8 156 aa4.73□□□□□ -1.65
Trim40-201ENSMUST00000087158 Dnah11E9Q7N9 4488 aa4.73□□□□□ -1.65
Trim40-201ENSMUST00000087158 Vpreb3D3Z6J4 130 aa4.72□□□□□ -1.65
Trim40-201ENSMUST00000087158 Wfdc10Q3V2J9 124 aa4.72□□□□□ -1.65
Trim40-201ENSMUST00000087158 Prr15lQ8JZM2 100 aa4.72□□□□□ -1.65
Trim40-201ENSMUST00000087158 Dnah7aE9Q0T8 4024 aa4.72□□□□□ -1.65
Trim40-201ENSMUST00000087158 Dnah9B1AR51 4484 aa4.72□□□□□ -1.65
Trim40-201ENSMUST00000087158 Phf5aP83870 110 aaKnown RBP4.72□□□□□ -1.65
Trim40-201ENSMUST00000087158 C130032M10RikQ8C888 123 aa4.72□□□□□ -1.65
Trim40-201ENSMUST00000087158 Ryr3A2AGL3 4863 aa4.71□□□□□ -1.66
Trim40-201ENSMUST00000087158 Defb9Q8R2I6 67 aa4.71□□□□□ -1.66
Trim40-201ENSMUST00000087158 Krtap29-1A2A5X4 342 aa4.7□□□□□ -1.66
Trim40-201ENSMUST00000087158 Coa6Q8BGD8 79 aa4.7□□□□□ -1.66
Trim40-201ENSMUST00000087158 Mrpl34Q99N91 92 aa4.7□□□□□ -1.66
Trim40-201ENSMUST00000087158 Q8K1L6 76 aa4.7□□□□□ -1.66
Trim40-201ENSMUST00000087158 Igkv3-4A0A140T8Q4 119 aa4.69□□□□□ -1.66
Trim40-201ENSMUST00000087158 Igkv8-19A0A0G2JFN8 121 aa4.69□□□□□ -1.66
Trim40-201ENSMUST00000087158 Gm10139O88245 57 aa4.69□□□□□ -1.66
Trim40-201ENSMUST00000087158 Gm12353A2AGJ4 60 aa4.68□□□□□ -1.66
Trim40-201ENSMUST00000087158 6030445D17RikE9Q8F9 148 aa4.67□□□□□ -1.66
Trim40-201ENSMUST00000087158 Gm44790A0A0N4SV91 103 aa4.67□□□□□ -1.66
Trim40-201ENSMUST00000087158 Ube2aQ9Z255 152 aa4.66□□□□□ -1.66
Trim40-201ENSMUST00000087158 HrnrQ8VHD8 2496 aa4.66□□□□□ -1.66
Trim40-201ENSMUST00000087158 Ryr2E9Q401 4966 aaKnown RBP4.66□□□□□ -1.66
Trim40-201ENSMUST00000087158 Gpr15lA0A0B4J1N3 78 aa4.65□□□□□ -1.67
Trim40-201ENSMUST00000087158 Gm27235Q3UW50 83 aa4.65□□□□□ -1.67
Trim40-201ENSMUST00000087158 Wfdc13Q5DQQ6 81 aa4.64□□□□□ -1.67
Trim40-201ENSMUST00000087158 Krtap31-2Q8CAY5 177 aa4.64□□□□□ -1.67
Trim40-201ENSMUST00000087158 Krtap15-1Q9QZU5 150 aa4.64□□□□□ -1.67
Trim40-201ENSMUST00000087158 NbdyA0A0N4SUI7 68 aa4.64□□□□□ -1.67
Trim40-201ENSMUST00000087158 Chchd10Q7TNL9 138 aa4.63□□□□□ -1.67
Trim40-201ENSMUST00000087158 Dnah7cA0A087WR13 4024 aa4.63□□□□□ -1.67
Trim40-201ENSMUST00000087158 Coa5Q99M07 74 aa4.63□□□□□ -1.67
Trim40-201ENSMUST00000087158 Gm10642Q3TWM1 71 aa4.62□□□□□ -1.67
Trim40-201ENSMUST00000087158 Adm2Q7TNK8 150 aa4.62□□□□□ -1.67
Trim40-201ENSMUST00000087158 1600014C23RikQ9DAX4 101 aa4.62□□□□□ -1.67
Trim40-201ENSMUST00000087158 1700018G05RikA0A1B0GSI2 66 aa4.61□□□□□ -1.67
Trim40-201ENSMUST00000087158 Atox1O08997 68 aaKnown RBP4.61□□□□□ -1.67
Trim40-201ENSMUST00000087158 Igkv3-7A0A0G2JE31 119 aa4.61□□□□□ -1.67
Trim40-201ENSMUST00000087158 Igkv3-5A0A140T8M6 119 aa4.61□□□□□ -1.67
Trim40-201ENSMUST00000087158 Gm21886J3QJU9 214 aa4.61□□□□□ -1.67
Trim40-201ENSMUST00000087158 Odf3bQ5M8M2 238 aa4.61□□□□□ -1.67
Trim40-201ENSMUST00000087158 Tnp2P11378 117 aa4.6□□□□□ -1.67
Trim40-201ENSMUST00000087158 Wfdc3Q14AE4 130 aa4.6□□□□□ -1.67
Trim40-201ENSMUST00000087158 Gm28230A0A0A0MQ91 144 aa4.58□□□□□ -1.68
Trim40-201ENSMUST00000087158 Igkv3-3A0A140T8Q0 119 aa4.58□□□□□ -1.68
Trim40-201ENSMUST00000087158 A030014E15RikA0A1Y7VJV2 120 aa4.58□□□□□ -1.68
Trim40-201ENSMUST00000087158 Gm3646F6S692 53 aa4.58□□□□□ -1.68
Trim40-201ENSMUST00000087158 Znf706Q9D115 76 aaKnown RBP4.58□□□□□ -1.68
Trim40-201ENSMUST00000087158 A0A286YE49 62 aa4.57□□□□□ -1.68
Trim40-201ENSMUST00000087158 Stard9Q80TF6 4561 aa4.57□□□□□ -1.68
Trim40-201ENSMUST00000087158 Phxr4P15974 95 aa4.57□□□□□ -1.68
Trim40-201ENSMUST00000087158 Defb39Q70KL3 74 aa4.57□□□□□ -1.68
Trim40-201ENSMUST00000087158 Defb12Q8K4N3 78 aa4.57□□□□□ -1.68
Trim40-201ENSMUST00000087158 1700074P13RikQ9D9G7 251 aa4.57□□□□□ -1.68
Trim40-201ENSMUST00000087158 Dnah5Q8VHE6 4621 aa4.56□□□□□ -1.68
Trim40-201ENSMUST00000087158 Krtap14O08640 167 aa4.56□□□□□ -1.68
Trim40-201ENSMUST00000087158 Reg3aO09037 175 aa4.56□□□□□ -1.68
Trim40-201ENSMUST00000087158 Gm19668J3QMD1 248 aa4.55□□□□□ -1.68
Trim40-201ENSMUST00000087158 Vps13dB1ART2 4390 aa4.55□□□□□ -1.68
Trim40-201ENSMUST00000087158 Gm2310J3QNJ2 377 aa4.55□□□□□ -1.68
Trim40-201ENSMUST00000087158 Chtf8P0CG14 533 aa4.55□□□□□ -1.68
Trim40-201ENSMUST00000087158 Gm38119A0A0A6YX29 146 aa4.54□□□□□ -1.68
Trim40-201ENSMUST00000087158 Rpl37aP61514 92 aa4.54□□□□□ -1.68
Trim40-201ENSMUST00000087158 Krtap13O88375 197 aa4.54□□□□□ -1.68
Trim40-201ENSMUST00000087158 Cypt14J3QPF7 87 aa4.53□□□□□ -1.68
Trim40-201ENSMUST00000087158 2310034C09RikQ9D746 214 aa4.53□□□□□ -1.68
Trim40-201ENSMUST00000087158 Dnah2P0C6F1 4456 aa4.51□□□□□ -1.69
Trim40-201ENSMUST00000087158 Anapc11Q9CPX9 84 aa4.5□□□□□ -1.69
Trim40-201ENSMUST00000087158 Gm2696A0A1W2P709 240 aa4.49□□□□□ -1.69
Trim40-201ENSMUST00000087158 Pkd1O08852 4293 aa4.48□□□□□ -1.69
Trim40-201ENSMUST00000087158 Gm16253D3Z167 63 aa4.47□□□□□ -1.69
Trim40-201ENSMUST00000087158 Krtap31-1Q9D644 177 aa4.46□□□□□ -1.7
Trim40-201ENSMUST00000087158 Lce1jD3YUU5 139 aa4.45□□□□□ -1.7
Trim40-201ENSMUST00000087158 ApobE9Q414 4505 aa4.45□□□□□ -1.7
Trim40-201ENSMUST00000087158 Prm2P07978 107 aa4.43□□□□□ -1.7
Trim40-201ENSMUST00000087158 Gm10267M0QWD8 85 aa4.43□□□□□ -1.7
Trim40-201ENSMUST00000087158 Hectd4E9Q2E4 4418 aa4.42□□□□□ -1.7
Trim40-201ENSMUST00000087158 Lrp1bQ9JI18 4599 aa4.42□□□□□ -1.7
Trim40-201ENSMUST00000087158 Gm12216A0A1W2P827 62 aa4.42□□□□□ -1.7
Trim40-201ENSMUST00000087158 Fat1A0A1L1SQU7 4645 aa4.41□□□□□ -1.7
Trim40-201ENSMUST00000087158 Dync1h1Q9JHU4 4644 aaKnown RBP4.4□□□□□ -1.71
Trim40-201ENSMUST00000087158 Cypt15B1AXS0 87 aa4.4□□□□□ -1.71
Trim40-201ENSMUST00000087158 SacsQ9JLC8 4582 aa4.4□□□□□ -1.71
Trim40-201ENSMUST00000087158 Birc6O88738 4882 aa4.39□□□□□ -1.71
Trim40-201ENSMUST00000087158 Gm20661K7N787 53 aa4.39□□□□□ -1.71
Trim40-201ENSMUST00000087158 Spaca4Q80ZQ0 127 aa4.39□□□□□ -1.71
Trim40-201ENSMUST00000087158 Gm20538F6Z9R1 75 aa4.37□□□□□ -1.71
Trim40-201ENSMUST00000087158 SptssbQ925E8 76 aa4.37□□□□□ -1.71
Trim40-201ENSMUST00000087158 Herc2Q4U2R1 4836 aa4.37□□□□□ -1.71
Trim40-201ENSMUST00000087158 Pkhd1E9PZ36 4059 aa4.37□□□□□ -1.71
Trim40-201ENSMUST00000087158 Ndufb1P0DN34 57 aa4.36□□□□□ -1.71
Trim40-201ENSMUST00000087158 PcloQ9QYX7 5068 aa4.34□□□□□ -1.71
Trim40-201ENSMUST00000087158 Kmt2cQ8BRH4 4903 aa4.34□□□□□ -1.71
Trim40-201ENSMUST00000087158 Ndufs5Q99LY9 106 aa4.34□□□□□ -1.71
Trim40-201ENSMUST00000087158 RetnlbQ99P86 105 aa4.33□□□□□ -1.72
Trim40-201ENSMUST00000087158 Defb38Q7TNV7 63 aa4.33□□□□□ -1.72
Trim40-201ENSMUST00000087158 Limd2Q8BGB5 128 aa4.31□□□□□ -1.72
Trim40-201ENSMUST00000087158 Fat2Q5F226 4351 aa4.31□□□□□ -1.72
Trim40-201ENSMUST00000087158 Gm21798J3QNU5 87 aa4.3□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 107.3 ms