RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Gm3238W4VSP7 230 aa5.65□□□□□ -1.5
Col4a4-201ENSMUST00000087050 Gm17349F7BGH6 99 aa5.65□□□□□ -1.51
Col4a4-201ENSMUST00000087050 Tnp1P10856 55 aa5.63□□□□□ -1.51
Col4a4-201ENSMUST00000087050 D6Ertd527eA0A0N4SWI3 464 aa5.63□□□□□ -1.51
Col4a4-201ENSMUST00000087050 Tnp2P11378 117 aa5.61□□□□□ -1.51
Col4a4-201ENSMUST00000087050 HttP42859 3119 aa5.6□□□□□ -1.51
Col4a4-201ENSMUST00000087050 Tenm4Q3UHK6 2771 aa5.6□□□□□ -1.51
Col4a4-201ENSMUST00000087050 Col12a1Q60847 3120 aa5.59□□□□□ -1.52
Col4a4-201ENSMUST00000087050 Helz2E9QAM5 2947 aaKnown RBP5.57□□□□□ -1.52
Col4a4-201ENSMUST00000087050 Gm9508A0A1W2P7W0 230 aa5.57□□□□□ -1.52
Col4a4-201ENSMUST00000087050 Krtap13O88375 197 aa5.57□□□□□ -1.52
Col4a4-201ENSMUST00000087050 AspmQ8CJ27 3122 aa5.54□□□□□ -1.52
Col4a4-201ENSMUST00000087050 Unc80Q8BLN6 3261 aa5.51□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Gm7137J3QMW1 236 aa5.51□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Vps13cQ8BX70 3748 aa5.51□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Tenm2Q9WTS5 2764 aa5.5□□□□□ -1.53
Col4a4-201ENSMUST00000087050 2310061N02RikQ9D6S9 174 aa5.49□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Celsr3Q91ZI0 3301 aa5.48□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Akap9Q70FJ1 3797 aa5.45□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Prm2P07978 107 aa5.45□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Gm36176A0A1W2P8D5 158 aa5.44□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Gm20537G3UYK7 97 aa5.43□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Zfhx3Q61329 3726 aa5.41□□□□□ -1.54
Col4a4-201ENSMUST00000087050 DmdP11531 3678 aa5.4□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Szt2A2A9C3 3431 aa5.38□□□□□ -1.55
Col4a4-201ENSMUST00000087050 OtogO55225 2910 aa5.37□□□□□ -1.55
Col4a4-201ENSMUST00000087050 Adgrg4B7ZCC9 3073 aa5.37□□□□□ -1.55
Col4a4-201ENSMUST00000087050 Gm5965D3Z724 196 aa5.34□□□□□ -1.55
Col4a4-201ENSMUST00000087050 B930094E09RikQ8C4T2 136 aa5.33□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Lrrc37aB1AWG4 3215 aa5.32□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Col7a1Q63870 2944 aa5.31□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Fbn1Q61554 2873 aaKnown RBP5.31□□□□□ -1.56
Col4a4-201ENSMUST00000087050 A930033H14RikG5E8X6 103 aa5.3□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Brca2P97929 3329 aa5.3□□□□□ -1.56
Col4a4-201ENSMUST00000087050 2310057N15RikQ9D6T8 200 aa5.29□□□□□ -1.56
Col4a4-201ENSMUST00000087050 SpenQ62504 3644 aaKnown RBP5.29□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Dchs2A0A0A6YW72 3346 aa5.29□□□□□ -1.56
Col4a4-201ENSMUST00000087050 VcanQ62059 3357 aa5.28□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Myo15aQ9QZZ4 3511 aa5.26□□□□□ -1.57
Col4a4-201ENSMUST00000087050 Gm17402F6Z0L5 76 aa5.23□□□□□ -1.57
Col4a4-201ENSMUST00000087050 Gm9507D3Z5T3 223 aa5.22□□□□□ -1.57
Col4a4-201ENSMUST00000087050 2310079G19RikQ9D6L6 185 aa5.22□□□□□ -1.57
Col4a4-201ENSMUST00000087050 Col6a3E9PWQ3 3284 aa5.2□□□□□ -1.58
Col4a4-201ENSMUST00000087050 Gm17416Q30KP4 66 aa5.18□□□□□ -1.58
Col4a4-201ENSMUST00000087050 Wdfy3Q6VNB8 3508 aa5.16□□□□□ -1.58
Col4a4-201ENSMUST00000087050 Cmya5Q70KF4 3739 aa5.15□□□□□ -1.59
Col4a4-201ENSMUST00000087050 Ank2Q8C8R3 3898 aa5.14□□□□□ -1.59
Col4a4-201ENSMUST00000087050 Krtap10-4Q08EG8 221 aa5.09□□□□□ -1.59
Col4a4-201ENSMUST00000087050 Gm884A2A9H6 3643 aa5.08□□□□□ -1.6
Col4a4-201ENSMUST00000087050 Smg1Q8BKX6 3658 aaKnown RBP5.07□□□□□ -1.6
Col4a4-201ENSMUST00000087050 Lama5Q61001 3718 aa5.06□□□□□ -1.6
Col4a4-201ENSMUST00000087050 Krtap10-10A0A1W2P7T6 217 aa5.04□□□□□ -1.6
Col4a4-201ENSMUST00000087050 SpegQ62407 3262 aa5.04□□□□□ -1.6
Col4a4-201ENSMUST00000087050 Dchs1E9PVD3 3291 aa5.03□□□□□ -1.6
Col4a4-201ENSMUST00000087050 2210017I01RikA0A0A6YVV1 95 aa5.01□□□□□ -1.61
Col4a4-201ENSMUST00000087050 Csmd1Q923L3 3564 aa5□□□□□ -1.61
Col4a4-201ENSMUST00000087050 4933428G20RikQ9D3X4 101 aa5□□□□□ -1.61
Col4a4-201ENSMUST00000087050 Zfhx4Q9JJN2 3550 aa4.96□□□□□ -1.62
Col4a4-201ENSMUST00000087050 RelnQ60841 3461 aa4.96□□□□□ -1.62
Col4a4-201ENSMUST00000087050 Gm2696A0A1W2P709 240 aa4.94□□□□□ -1.62
Col4a4-201ENSMUST00000087050 Muc6Q80T03 2850 aa4.92□□□□□ -1.62
Col4a4-201ENSMUST00000087050 BsnO88737 3942 aa4.87□□□□□ -1.63
Col4a4-201ENSMUST00000087050 Gm19668J3QMD1 248 aa4.83□□□□□ -1.64
Col4a4-201ENSMUST00000087050 LystP97412 3788 aa4.79□□□□□ -1.64
Col4a4-201ENSMUST00000087050 Muc5acE9QAQ8 3455 aa4.79□□□□□ -1.64
Col4a4-201ENSMUST00000087050 Xirp2Q4U4S6 3784 aa4.74□□□□□ -1.65
Col4a4-201ENSMUST00000087050 Csmd2V9GX34 3611 aa4.72□□□□□ -1.65
Col4a4-201ENSMUST00000087050 Gm11939A2A592 99 aa4.62□□□□□ -1.67
Col4a4-201ENSMUST00000087050 Muc4Q8JZM8 3443 aa4.62□□□□□ -1.67
Col4a4-201ENSMUST00000087050 Svep1A2AVA0 3567 aa4.61□□□□□ -1.67
Col4a4-201ENSMUST00000087050 Krtap13-1Q8K198 168 aa4.57□□□□□ -1.68
Col4a4-201ENSMUST00000087050 Krtap3-1A2A591 98 aa4.56□□□□□ -1.68
Col4a4-201ENSMUST00000087050 Gm9918Q8BUR5 174 aa4.56□□□□□ -1.68
Col4a4-201ENSMUST00000087050 Gm9736A0A1W2P7N1 277 aa4.55□□□□□ -1.68
Col4a4-201ENSMUST00000087050 Krtap3-2Q9D638 99 aa4.52□□□□□ -1.69
Col4a4-201ENSMUST00000087050 Krtap3-3Q9D7P0 99 aa4.52□□□□□ -1.69
Col4a4-201ENSMUST00000087050 Dnah3Q8BW94 4083 aa4.49□□□□□ -1.69
Col4a4-201ENSMUST00000087050 Hspg2Q05793 3707 aaKnown RBP4.42□□□□□ -1.7
Col4a4-201ENSMUST00000087050 Krtap7-1Q9D3I6 87 aa4.4□□□□□ -1.7
Col4a4-201ENSMUST00000087050 Krtap19-5O08632 62 aa4.38□□□□□ -1.71
Col4a4-201ENSMUST00000087050 Csmd3Q80T79 3707 aa4.37□□□□□ -1.71
Col4a4-201ENSMUST00000087050 CubnQ9JLB4 3623 aa4.35□□□□□ -1.71
Col4a4-201ENSMUST00000087050 Sprr2a3Q4KL71 83 aa4.32□□□□□ -1.72
Col4a4-201ENSMUST00000087050 Sprr2a1Q9CQK8 83 aa4.32□□□□□ -1.72
Col4a4-201ENSMUST00000087050 Krtap1-5A2A590 122 aa4.31□□□□□ -1.72
Col4a4-201ENSMUST00000087050 Gm10318A0A1W2P728 225 aa4.28□□□□□ -1.73
Col4a4-201ENSMUST00000087050 Dnah7bL7N1Y0 4068 aa4.25□□□□□ -1.73
Col4a4-201ENSMUST00000087050 Krtap19-9aF8WH65 55 aa4.24□□□□□ -1.73
Col4a4-201ENSMUST00000087050 Kmt2aP55200 3966 aa4.23□□□□□ -1.73
Col4a4-201ENSMUST00000087050 Krtap19-9bQ99NG9 58 aa4.2□□□□□ -1.74
Col4a4-201ENSMUST00000087050 Crct1Q6PAI5 102 aa4.2□□□□□ -1.74
Col4a4-201ENSMUST00000087050 Gm6358A0A087WPH4 74 aa4.15□□□□□ -1.75
Col4a4-201ENSMUST00000087050 Huwe1Q7TMY8 4377 aaKnown RBP4.12□□□□□ -1.75
Col4a4-201ENSMUST00000087050 Vps13bQ80TY5 3993 aa4.1□□□□□ -1.75
Col4a4-201ENSMUST00000087050 Krtap8-1O08633 61 aa4.1□□□□□ -1.75
Col4a4-201ENSMUST00000087050 Krtap1-4Q3V2D6 188 aa4.09□□□□□ -1.76
Col4a4-201ENSMUST00000087050 Dnah7cA0A087WR13 4024 aa4.08□□□□□ -1.76
Col4a4-201ENSMUST00000087050 Dnah7aE9Q0T8 4024 aa4.07□□□□□ -1.76
Col4a4-201ENSMUST00000087050 PrkdcP97313 4128 aa4.02□□□□□ -1.77
Col4a4-201ENSMUST00000087050 Dnah6E9Q0B6 4144 aa4.02□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 87.8 ms