RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 SmcpP15265 143 aa9.02□□□□□ -0.96
Col18a1-202ENSMUST00000081654 Unc80Q8BLN6 3261 aa9.02□□□□□ -0.97
Col18a1-202ENSMUST00000081654 D6Ertd527eA0A0N4SWI3 464 aa9□□□□□ -0.97
Col18a1-202ENSMUST00000081654 1700042G07RikB1AUF7 90 aa8.99□□□□□ -0.97
Col18a1-202ENSMUST00000081654 Frem2Q6NVD0 3160 aa8.97□□□□□ -0.97
Col18a1-202ENSMUST00000081654 ApcQ61315 2845 aa8.95□□□□□ -0.98
Col18a1-202ENSMUST00000081654 Lama1P19137 3084 aa8.95□□□□□ -0.98
Col18a1-202ENSMUST00000081654 Celsr3Q91ZI0 3301 aa8.93□□□□□ -0.98
Col18a1-202ENSMUST00000081654 Celsr2Q9R0M0 2920 aa8.93□□□□□ -0.98
Col18a1-202ENSMUST00000081654 Tenm3Q9WTS6 2715 aa8.92□□□□□ -0.98
Col18a1-202ENSMUST00000081654 Pdzd2E9Q1M1 2796 aa8.88□□□□□ -0.99
Col18a1-202ENSMUST00000081654 Dchs2A0A0A6YW72 3346 aa8.87□□□□□ -0.99
Col18a1-202ENSMUST00000081654 Trank1Q8BV79 2999 aa8.86□□□□□ -0.99
Col18a1-202ENSMUST00000081654 Gm5965D3Z724 196 aa8.86□□□□□ -0.99
Col18a1-202ENSMUST00000081654 Nf1Q04690 2841 aa8.84□□□□□ -0.99
Col18a1-202ENSMUST00000081654 Chd9Q8BYH8 2885 aa8.82□□□□□ -1
Col18a1-202ENSMUST00000081654 Brca2P97929 3329 aa8.79□□□□□ -1
Col18a1-202ENSMUST00000081654 Gm21887J3QQ04 176 aa8.69□□□□□ -1.02
Col18a1-202ENSMUST00000081654 2310057N15RikQ9D6T8 200 aa8.68□□□□□ -1.02
Col18a1-202ENSMUST00000081654 Col6a3E9PWQ3 3284 aa8.65□□□□□ -1.03
Col18a1-202ENSMUST00000081654 A930033H14RikG5E8X6 103 aa8.57□□□□□ -1.04
Col18a1-202ENSMUST00000081654 VcanQ62059 3357 aa8.57□□□□□ -1.04
Col18a1-202ENSMUST00000081654 LrbaQ9ESE1 2856 aa8.54□□□□□ -1.04
Col18a1-202ENSMUST00000081654 Tenm1Q9WTS4 2731 aa8.54□□□□□ -1.04
Col18a1-202ENSMUST00000081654 Tenm2Q9WTS5 2764 aa8.45□□□□□ -1.06
Col18a1-202ENSMUST00000081654 Dchs1E9PVD3 3291 aa8.43□□□□□ -1.06
Col18a1-202ENSMUST00000081654 Tnp1P10856 55 aa8.42□□□□□ -1.06
Col18a1-202ENSMUST00000081654 Zfhx3Q61329 3726 aa8.42□□□□□ -1.06
Col18a1-202ENSMUST00000081654 Gm40193A0A1B0GT39 78 aa8.41□□□□□ -1.06
Col18a1-202ENSMUST00000081654 Gm17416Q30KP4 66 aa8.41□□□□□ -1.06
Col18a1-202ENSMUST00000081654 Helz2E9QAM5 2947 aaKnown RBP8.41□□□□□ -1.06
Col18a1-202ENSMUST00000081654 Gm20537G3UYK7 97 aa8.39□□□□□ -1.07
Col18a1-202ENSMUST00000081654 2310079G19RikQ9D6L6 185 aa8.39□□□□□ -1.07
Col18a1-202ENSMUST00000081654 RelnQ60841 3461 aa8.37□□□□□ -1.07
Col18a1-202ENSMUST00000081654 B930094E09RikQ8C4T2 136 aa8.32□□□□□ -1.08
Col18a1-202ENSMUST00000081654 Ndufaf8A2AMZ4 74 aa8.27□□□□□ -1.09
Col18a1-202ENSMUST00000081654 Gm9736A0A1W2P7N1 277 aa8.27□□□□□ -1.09
Col18a1-202ENSMUST00000081654 SpegQ62407 3262 aa8.27□□□□□ -1.09
Col18a1-202ENSMUST00000081654 Wdfy3Q6VNB8 3508 aa8.25□□□□□ -1.09
Col18a1-202ENSMUST00000081654 2210017I01RikA0A0A6YVV1 95 aa8.23□□□□□ -1.09
Col18a1-202ENSMUST00000081654 Muc5acE9QAQ8 3455 aa8.21□□□□□ -1.1
Col18a1-202ENSMUST00000081654 Myo15aQ9QZZ4 3511 aa8.2□□□□□ -1.1
Col18a1-202ENSMUST00000081654 Vps13cQ8BX70 3748 aa8.2□□□□□ -1.1
Col18a1-202ENSMUST00000081654 Akap9Q70FJ1 3797 aa8.18□□□□□ -1.1
Col18a1-202ENSMUST00000081654 OtogO55225 2910 aa8.17□□□□□ -1.1
Col18a1-202ENSMUST00000081654 Megf8P60882 2789 aa8.14□□□□□ -1.11
Col18a1-202ENSMUST00000081654 Gm17402F6Z0L5 76 aa8.07□□□□□ -1.12
Col18a1-202ENSMUST00000081654 VwfQ8CIZ8 2813 aa8.05□□□□□ -1.12
Col18a1-202ENSMUST00000081654 DmdP11531 3678 aa8.04□□□□□ -1.12
Col18a1-202ENSMUST00000081654 Gm9918Q8BUR5 174 aa8.01□□□□□ -1.13
Col18a1-202ENSMUST00000081654 Fbn1Q61554 2873 aaKnown RBP8.01□□□□□ -1.13
Col18a1-202ENSMUST00000081654 Gm11939A2A592 99 aa8□□□□□ -1.13
Col18a1-202ENSMUST00000081654 Krtap19-5O08632 62 aa7.99□□□□□ -1.13
Col18a1-202ENSMUST00000081654 Gm9112A2AI92 75 aa7.92□□□□□ -1.14
Col18a1-202ENSMUST00000081654 Prm2P07978 107 aa7.8□□□□□ -1.16
Col18a1-202ENSMUST00000081654 Krtap13-1Q8K198 168 aa7.77□□□□□ -1.17
Col18a1-202ENSMUST00000081654 Lama5Q61001 3718 aa7.77□□□□□ -1.17
Col18a1-202ENSMUST00000081654 Zfhx4Q9JJN2 3550 aa7.72□□□□□ -1.17
Col18a1-202ENSMUST00000081654 Ank2Q8C8R3 3898 aa7.72□□□□□ -1.17
Col18a1-202ENSMUST00000081654 Gm19668J3QMD1 248 aa7.71□□□□□ -1.18
Col18a1-202ENSMUST00000081654 Col7a1Q63870 2944 aa7.71□□□□□ -1.18
Col18a1-202ENSMUST00000081654 Smg1Q8BKX6 3658 aaKnown RBP7.7□□□□□ -1.18
Col18a1-202ENSMUST00000081654 Gm10318A0A1W2P728 225 aa7.7□□□□□ -1.18
Col18a1-202ENSMUST00000081654 Krtap3-2Q9D638 99 aa7.69□□□□□ -1.18
Col18a1-202ENSMUST00000081654 Krtap3-3Q9D7P0 99 aa7.69□□□□□ -1.18
Col18a1-202ENSMUST00000081654 Csmd1Q923L3 3564 aa7.69□□□□□ -1.18
Col18a1-202ENSMUST00000081654 Crct1Q6PAI5 102 aa7.63□□□□□ -1.19
Col18a1-202ENSMUST00000081654 Krtap3-1A2A591 98 aa7.6□□□□□ -1.19
Col18a1-202ENSMUST00000081654 Muc6Q80T03 2850 aa7.58□□□□□ -1.2
Col18a1-202ENSMUST00000081654 SpenQ62504 3644 aaKnown RBP7.48□□□□□ -1.21
Col18a1-202ENSMUST00000081654 Gm884A2A9H6 3643 aa7.41□□□□□ -1.22
Col18a1-202ENSMUST00000081654 4933428G20RikQ9D3X4 101 aa7.36□□□□□ -1.23
Col18a1-202ENSMUST00000081654 Dnah14A0A140LIJ4 4489 aa7.34□□□□□ -1.23
Col18a1-202ENSMUST00000081654 Muc4Q8JZM8 3443 aa7.32□□□□□ -1.24
Col18a1-202ENSMUST00000081654 Huwe1Q7TMY8 4377 aaKnown RBP7.27□□□□□ -1.25
Col18a1-202ENSMUST00000081654 Svep1A2AVA0 3567 aa7.23□□□□□ -1.25
Col18a1-202ENSMUST00000081654 Krtap1-5A2A590 122 aa7.21□□□□□ -1.26
Col18a1-202ENSMUST00000081654 Cmya5Q70KF4 3739 aa7.21□□□□□ -1.26
Col18a1-202ENSMUST00000081654 Dnah5Q8VHE6 4621 aa7.15□□□□□ -1.26
Col18a1-202ENSMUST00000081654 Stard9Q80TF6 4561 aa7.12□□□□□ -1.27
Col18a1-202ENSMUST00000081654 Dnah10D3YYQ8 4591 aa7.1□□□□□ -1.27
Col18a1-202ENSMUST00000081654 Vps13dB1ART2 4390 aa7.09□□□□□ -1.27
Col18a1-202ENSMUST00000081654 Sprr2a3Q4KL71 83 aa7.06□□□□□ -1.28
Col18a1-202ENSMUST00000081654 Sprr2a1Q9CQK8 83 aa7.06□□□□□ -1.28
Col18a1-202ENSMUST00000081654 Csmd2V9GX34 3611 aa7.06□□□□□ -1.28
Col18a1-202ENSMUST00000081654 Krtap19-9aF8WH65 55 aa7.05□□□□□ -1.28
Col18a1-202ENSMUST00000081654 PlecQ9QXS1 4691 aaKnown RBP7.04□□□□□ -1.28
Col18a1-202ENSMUST00000081654 Gm18596A0A1W2P860 280 aa7.03□□□□□ -1.28
Col18a1-202ENSMUST00000081654 Krtap1-4Q3V2D6 188 aa6.98□□□□□ -1.29
Col18a1-202ENSMUST00000081654 Dnah17Q69Z23 4481 aa6.97□□□□□ -1.29
Col18a1-202ENSMUST00000081654 LorP18165 486 aa6.93□□□□□ -1.3
Col18a1-202ENSMUST00000081654 Krtap8-1O08633 61 aa6.9□□□□□ -1.3
Col18a1-202ENSMUST00000081654 Gm6358A0A087WPH4 74 aa6.88□□□□□ -1.31
Col18a1-202ENSMUST00000081654 LystP97412 3788 aa6.86□□□□□ -1.31
Col18a1-202ENSMUST00000081654 Krtap19-9bQ99NG9 58 aa6.79□□□□□ -1.32
Col18a1-202ENSMUST00000081654 Krtap7-1Q9D3I6 87 aa6.78□□□□□ -1.32
Col18a1-202ENSMUST00000081654 Krtap12-1Q9Z287 130 aa6.78□□□□□ -1.32
Col18a1-202ENSMUST00000081654 Gm19402J3QJV4 266 aa6.75□□□□□ -1.33
Col18a1-202ENSMUST00000081654 Dync2h1Q45VK7 4306 aa6.75□□□□□ -1.33
Col18a1-202ENSMUST00000081654 Dync1h1Q9JHU4 4644 aaKnown RBP6.71□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms