RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 A0A286YE49 62 aa11.02□□□□□ -0.65
Trim58-201ENSMUST00000075084 Gm2310J3QNJ2 377 aa11□□□□□ -0.65
Trim58-201ENSMUST00000075084 Pkhd1E9PZ36 4059 aa10.99□□□□□ -0.65
Trim58-201ENSMUST00000075084 Rps28P62858 69 aaKnown RBP10.99□□□□□ -0.65
Trim58-201ENSMUST00000075084 Krtap13O88375 197 aa10.98□□□□□ -0.65
Trim58-201ENSMUST00000075084 SnurfQ9WU12 71 aa10.98□□□□□ -0.65
Trim58-201ENSMUST00000075084 Bean1Q9EQG5 255 aa10.94□□□□□ -0.66
Trim58-201ENSMUST00000075084 Smlr1J3QMJ4 66 aa10.94□□□□□ -0.66
Trim58-201ENSMUST00000075084 Coa6Q8BGD8 79 aa10.94□□□□□ -0.66
Trim58-201ENSMUST00000075084 Hectd4E9Q2E4 4418 aa10.93□□□□□ -0.66
Trim58-201ENSMUST00000075084 Gm16253D3Z167 63 aa10.92□□□□□ -0.66
Trim58-201ENSMUST00000075084 Pet100P0DJE0 76 aa10.9□□□□□ -0.66
Trim58-201ENSMUST00000075084 Spint4Q9D263 159 aa10.9□□□□□ -0.66
Trim58-201ENSMUST00000075084 1700074P13RikQ9D9G7 251 aa10.9□□□□□ -0.66
Trim58-201ENSMUST00000075084 SacsQ9JLC8 4582 aa10.88□□□□□ -0.67
Trim58-201ENSMUST00000075084 Atox1O08997 68 aaKnown RBP10.87□□□□□ -0.67
Trim58-201ENSMUST00000075084 Brk1Q91VR8 75 aa10.87□□□□□ -0.67
Trim58-201ENSMUST00000075084 Defb12Q8K4N3 78 aa10.84□□□□□ -0.67
Trim58-201ENSMUST00000075084 Serp1Q9Z1W5 66 aa10.84□□□□□ -0.67
Trim58-201ENSMUST00000075084 Lrp1bQ9JI18 4599 aa10.82□□□□□ -0.68
Trim58-201ENSMUST00000075084 Igkv3-3A0A140T8Q0 119 aa10.81□□□□□ -0.68
Trim58-201ENSMUST00000075084 Ryr1E9PZQ0 5035 aa10.79□□□□□ -0.68
Trim58-201ENSMUST00000075084 Gm10267M0QWD8 85 aa10.77□□□□□ -0.69
Trim58-201ENSMUST00000075084 Coa5Q99M07 74 aa10.74□□□□□ -0.69
Trim58-201ENSMUST00000075084 Spaca4Q80ZQ0 127 aa10.73□□□□□ -0.69
Trim58-201ENSMUST00000075084 Chtf8P0CG14 533 aa10.68□□□□□ -0.7
Trim58-201ENSMUST00000075084 SvipQ3UZP4 77 aa10.67□□□□□ -0.7
Trim58-201ENSMUST00000075084 Dph3Q8K0W9 82 aa10.67□□□□□ -0.7
Trim58-201ENSMUST00000075084 Cdc42se1Q8BHL7 80 aa10.66□□□□□ -0.7
Trim58-201ENSMUST00000075084 Fat2Q5F226 4351 aa10.66□□□□□ -0.7
Trim58-201ENSMUST00000075084 Cypt15B1AXS0 87 aa10.64□□□□□ -0.71
Trim58-201ENSMUST00000075084 A530084C06RikQ3UTW2 186 aa10.63□□□□□ -0.71
Trim58-201ENSMUST00000075084 Vps13bQ80TY5 3993 aa10.63□□□□□ -0.71
Trim58-201ENSMUST00000075084 Kmt2cQ8BRH4 4903 aa10.63□□□□□ -0.71
Trim58-201ENSMUST00000075084 H2al1aQ5M8Q2 105 aa10.6□□□□□ -0.71
Trim58-201ENSMUST00000075084 Pkhd1l1Q80ZA4 4249 aa10.59□□□□□ -0.71
Trim58-201ENSMUST00000075084 Mrpl55Q9CZ83 127 aa10.59□□□□□ -0.71
Trim58-201ENSMUST00000075084 Defb13Q8R2I4 64 aa10.58□□□□□ -0.72
Trim58-201ENSMUST00000075084 Gm10197F6QEY5 67 aa10.56□□□□□ -0.72
Trim58-201ENSMUST00000075084 Gm10160F6Y577 67 aa10.56□□□□□ -0.72
Trim58-201ENSMUST00000075084 Defb38Q7TNV7 63 aa10.54□□□□□ -0.72
Trim58-201ENSMUST00000075084 Dnah8Q91XQ0 4731 aa10.53□□□□□ -0.72
Trim58-201ENSMUST00000075084 RetnlbQ99P86 105 aa10.49□□□□□ -0.73
Trim58-201ENSMUST00000075084 Lrp1Q91ZX7 4545 aaKnown RBP10.43□□□□□ -0.74
Trim58-201ENSMUST00000075084 Fat3Q8BNA6 4555 aa10.41□□□□□ -0.74
Trim58-201ENSMUST00000075084 Gm21798J3QNU5 87 aa10.36□□□□□ -0.75
Trim58-201ENSMUST00000075084 Phxr4P15974 95 aa10.36□□□□□ -0.75
Trim58-201ENSMUST00000075084 Abca13Q5SSE9 5034 aa10.33□□□□□ -0.76
Trim58-201ENSMUST00000075084 Krtap19-5O08632 62 aa10.32□□□□□ -0.76
Trim58-201ENSMUST00000075084 Herc2Q4U2R1 4836 aa10.32□□□□□ -0.76
Trim58-201ENSMUST00000075084 Gm10643Q3URG9 111 aa10.31□□□□□ -0.76
Trim58-201ENSMUST00000075084 Rps29P62274 56 aa10.29□□□□□ -0.76
Trim58-201ENSMUST00000075084 Gm10337F7DEP7 55 aa10.27□□□□□ -0.77
Trim58-201ENSMUST00000075084 Gm20661K7N787 53 aa10.25□□□□□ -0.77
Trim58-201ENSMUST00000075084 Gm10999F6Q4M4 69 aa10.24□□□□□ -0.77
Trim58-201ENSMUST00000075084 Birc6O88738 4882 aa10.23□□□□□ -0.77
Trim58-201ENSMUST00000075084 H2al1eQ810S6 105 aa10.22□□□□□ -0.77
Trim58-201ENSMUST00000075084 Gm26620Q9CY65 116 aa10.22□□□□□ -0.77
Trim58-201ENSMUST00000075084 Krtap3-2Q9D638 99 aa10.22□□□□□ -0.77
Trim58-201ENSMUST00000075084 Krtap3-3Q9D7P0 99 aa10.22□□□□□ -0.77
Trim58-201ENSMUST00000075084 Kiaa1109A2AAE1 5005 aa10.21□□□□□ -0.78
Trim58-201ENSMUST00000075084 H2al1bA0A087WP11 105 aa10.18□□□□□ -0.78
Trim58-201ENSMUST00000075084 H2al1kJ3QP08 105 aa10.18□□□□□ -0.78
Trim58-201ENSMUST00000075084 Q8BGJ3 129 aa10.18□□□□□ -0.78
Trim58-201ENSMUST00000075084 H2al1mQ9DAD9 105 aa10.18□□□□□ -0.78
Trim58-201ENSMUST00000075084 Gm11939A2A592 99 aa10.17□□□□□ -0.78
Trim58-201ENSMUST00000075084 Dnhd1D3Z2X2 4750 aa10.16□□□□□ -0.78
Trim58-201ENSMUST00000075084 2310034C09RikQ9D746 214 aa10.14□□□□□ -0.79
Trim58-201ENSMUST00000075084 Mycbp2Q7TPH6 4711 aa10.09□□□□□ -0.79
Trim58-201ENSMUST00000075084 2310079G19RikQ9D6L6 185 aa10.08□□□□□ -0.8
Trim58-201ENSMUST00000075084 HydinQ80W93 5154 aa10.08□□□□□ -0.8
Trim58-201ENSMUST00000075084 A930033H14RikG5E8X6 103 aa10.08□□□□□ -0.8
Trim58-201ENSMUST00000075084 4933415A04RikQ9D443 101 aa10.04□□□□□ -0.8
Trim58-201ENSMUST00000075084 Gm4491E0CX42 125 aa10.03□□□□□ -0.8
Trim58-201ENSMUST00000075084 Sox16Q62247 57 aa10.03□□□□□ -0.8
Trim58-201ENSMUST00000075084 Ndufb1P0DN34 57 aa10.01□□□□□ -0.81
Trim58-201ENSMUST00000075084 D6Ertd527eA0A0N4SWI3 464 aa9.99□□□□□ -0.81
Trim58-201ENSMUST00000075084 SptssbQ925E8 76 aa9.98□□□□□ -0.81
Trim58-201ENSMUST00000075084 4930507D05RikQ8C9C9 103 aa9.97□□□□□ -0.81
Trim58-201ENSMUST00000075084 Uqcr11Q9CPX8 56 aa9.97□□□□□ -0.81
Trim58-201ENSMUST00000075084 Defb1P56386 69 aa9.95□□□□□ -0.82
Trim58-201ENSMUST00000075084 Gm9736A0A1W2P7N1 277 aa9.95□□□□□ -0.82
Trim58-201ENSMUST00000075084 Limd2Q8BGB5 128 aa9.95□□□□□ -0.82
Trim58-201ENSMUST00000075084 Gm5767A0A0J9YTU8 78 aa9.93□□□□□ -0.82
Trim58-201ENSMUST00000075084 PcloQ9QYX7 5068 aa9.87□□□□□ -0.83
Trim58-201ENSMUST00000075084 Lrp2A2ARV4 4660 aa9.8□□□□□ -0.84
Trim58-201ENSMUST00000075084 Gm5965D3Z724 196 aa9.78□□□□□ -0.84
Trim58-201ENSMUST00000075084 Krtap15-1Q9QZU5 150 aa9.69□□□□□ -0.86
Trim58-201ENSMUST00000075084 Rpl37Q9D823 97 aa9.65□□□□□ -0.86
Trim58-201ENSMUST00000075084 9230102O04RikA2ASX7 82 aa9.64□□□□□ -0.87
Trim58-201ENSMUST00000075084 Gm3646F6S692 53 aa9.63□□□□□ -0.87
Trim58-201ENSMUST00000075084 Rnase13Q5GAM7 153 aa9.63□□□□□ -0.87
Trim58-201ENSMUST00000075084 Herc1E9PZP8 4859 aa9.62□□□□□ -0.87
Trim58-201ENSMUST00000075084 Lce1mQ9CR91 182 aa9.61□□□□□ -0.87
Trim58-201ENSMUST00000075084 Cox6b2Q80ZN9 88 aa9.6□□□□□ -0.87
Trim58-201ENSMUST00000075084 Sec61gP60060 68 aa9.48□□□□□ -0.89
Trim58-201ENSMUST00000075084 Gm9821Q8K076 103 aa9.47□□□□□ -0.89
Trim58-201ENSMUST00000075084 Ndufs5Q99LY9 106 aa9.46□□□□□ -0.89
Trim58-201ENSMUST00000075084 Gm17416Q30KP4 66 aa9.41□□□□□ -0.9
Trim58-201ENSMUST00000075084 Gm17606F6ZL36 78 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms