RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Vps13dB1ART2 4390 aa6.91□□□□□ -1.3
Vamp1-202ENSMUST00000063588 Phxr4P15974 95 aa6.91□□□□□ -1.3
Vamp1-202ENSMUST00000063588 4933415A04RikQ9D443 101 aa6.91□□□□□ -1.3
Vamp1-202ENSMUST00000063588 Gm28230A0A0A0MQ91 144 aa6.9□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Gm10197F6QEY5 67 aa6.9□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Rpl37aP61514 92 aa6.9□□□□□ -1.31
Vamp1-202ENSMUST00000063588 1600014C23RikQ9DAX4 101 aa6.9□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Prr15lQ8JZM2 100 aa6.88□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Coa5Q99M07 74 aa6.88□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Dnah2P0C6F1 4456 aa6.87□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Gm28374F6SG70 93 aa6.87□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Gm21886J3QJU9 214 aa6.87□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Defb39Q70KL3 74 aa6.86□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Cypt14J3QPF7 87 aa6.85□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Igkv8-19A0A0G2JFN8 121 aa6.84□□□□□ -1.31
Vamp1-202ENSMUST00000063588 Krtap14O08640 167 aa6.84□□□□□ -1.32
Vamp1-202ENSMUST00000063588 Ndufb1P0DN34 57 aa6.84□□□□□ -1.32
Vamp1-202ENSMUST00000063588 Krtap10-4Q08EG8 221 aa6.84□□□□□ -1.32
Vamp1-202ENSMUST00000063588 Pkd1O08852 4293 aa6.79□□□□□ -1.32
Vamp1-202ENSMUST00000063588 A0A286YE49 62 aa6.79□□□□□ -1.32
Vamp1-202ENSMUST00000063588 Dnah5Q8VHE6 4621 aa6.79□□□□□ -1.32
Vamp1-202ENSMUST00000063588 1700042G07RikB1AUF7 90 aa6.77□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Krtap4-1Q3UUY3 169 aa6.77□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Reg3aO09037 175 aa6.76□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Krtap13O88375 197 aa6.76□□□□□ -1.33
Vamp1-202ENSMUST00000063588 ApobE9Q414 4505 aa6.76□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Gm16253D3Z167 63 aa6.75□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Gm26620Q9CY65 116 aa6.75□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Wfdc3Q14AE4 130 aa6.73□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Gm2310J3QNJ2 377 aa6.72□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Anapc11Q9CPX9 84 aa6.72□□□□□ -1.33
Vamp1-202ENSMUST00000063588 Hectd4E9Q2E4 4418 aa6.71□□□□□ -1.34
Vamp1-202ENSMUST00000063588 Limd2Q8BGB5 128 aa6.7□□□□□ -1.34
Vamp1-202ENSMUST00000063588 Dync1h1Q9JHU4 4644 aaKnown RBP6.67□□□□□ -1.34
Vamp1-202ENSMUST00000063588 Gm2696A0A1W2P709 240 aa6.67□□□□□ -1.34
Vamp1-202ENSMUST00000063588 Igkv3-3A0A140T8Q0 119 aa6.66□□□□□ -1.34
Vamp1-202ENSMUST00000063588 1700074P13RikQ9D9G7 251 aa6.66□□□□□ -1.34
Vamp1-202ENSMUST00000063588 Defb12Q8K4N3 78 aa6.6□□□□□ -1.35
Vamp1-202ENSMUST00000063588 SptssbQ925E8 76 aa6.6□□□□□ -1.35
Vamp1-202ENSMUST00000063588 Uqcr11Q9CPX8 56 aa6.6□□□□□ -1.35
Vamp1-202ENSMUST00000063588 Fat1A0A1L1SQU7 4645 aa6.6□□□□□ -1.35
Vamp1-202ENSMUST00000063588 Gm3646F6S692 53 aa6.59□□□□□ -1.35
Vamp1-202ENSMUST00000063588 Lrp1bQ9JI18 4599 aa6.59□□□□□ -1.35
Vamp1-202ENSMUST00000063588 9230102O04RikA2ASX7 82 aa6.59□□□□□ -1.36
Vamp1-202ENSMUST00000063588 Pkhd1E9PZ36 4059 aa6.58□□□□□ -1.36
Vamp1-202ENSMUST00000063588 Spaca4Q80ZQ0 127 aa6.56□□□□□ -1.36
Vamp1-202ENSMUST00000063588 Ndufs5Q99LY9 106 aa6.55□□□□□ -1.36
Vamp1-202ENSMUST00000063588 Stard9Q80TF6 4561 aa6.54□□□□□ -1.36
Vamp1-202ENSMUST00000063588 Cypt15B1AXS0 87 aa6.54□□□□□ -1.36
Vamp1-202ENSMUST00000063588 Chtf8P0CG14 533 aa6.54□□□□□ -1.36
Vamp1-202ENSMUST00000063588 Gm20661K7N787 53 aa6.53□□□□□ -1.36
Vamp1-202ENSMUST00000063588 Gm11939A2A592 99 aa6.52□□□□□ -1.37
Vamp1-202ENSMUST00000063588 Pkhd1l1Q80ZA4 4249 aa6.51□□□□□ -1.37
Vamp1-202ENSMUST00000063588 Ryr3A2AGL3 4863 aa6.51□□□□□ -1.37
Vamp1-202ENSMUST00000063588 Rps29P62274 56 aa6.5□□□□□ -1.37
Vamp1-202ENSMUST00000063588 Fat2Q5F226 4351 aa6.49□□□□□ -1.37
Vamp1-202ENSMUST00000063588 SacsQ9JLC8 4582 aa6.47□□□□□ -1.37
Vamp1-202ENSMUST00000063588 Gm10267M0QWD8 85 aa6.47□□□□□ -1.37
Vamp1-202ENSMUST00000063588 Defb13Q8R2I4 64 aa6.47□□□□□ -1.37
Vamp1-202ENSMUST00000063588 Ryr2E9Q401 4966 aaKnown RBP6.46□□□□□ -1.37
Vamp1-202ENSMUST00000063588 Ryr1E9PZQ0 5035 aa6.46□□□□□ -1.38
Vamp1-202ENSMUST00000063588 RetnlbQ99P86 105 aa6.44□□□□□ -1.38
Vamp1-202ENSMUST00000063588 Q8BGJ3 129 aa6.41□□□□□ -1.38
Vamp1-202ENSMUST00000063588 Vps13bQ80TY5 3993 aa6.39□□□□□ -1.39
Vamp1-202ENSMUST00000063588 Pla2g10Q9QXX3 151 aa6.36□□□□□ -1.39
Vamp1-202ENSMUST00000063588 Krtap19-5O08632 62 aa6.33□□□□□ -1.4
Vamp1-202ENSMUST00000063588 Gm9821Q8K076 103 aa6.33□□□□□ -1.4
Vamp1-202ENSMUST00000063588 Gm11563B1AQ90 168 aa6.31□□□□□ -1.4
Vamp1-202ENSMUST00000063588 Krtap4-7Q9D732 168 aa6.31□□□□□ -1.4
Vamp1-202ENSMUST00000063588 2310034C09RikQ9D746 214 aa6.31□□□□□ -1.4
Vamp1-202ENSMUST00000063588 Dnah8Q91XQ0 4731 aa6.28□□□□□ -1.4
Vamp1-202ENSMUST00000063588 Krtap3-2Q9D638 99 aa6.28□□□□□ -1.4
Vamp1-202ENSMUST00000063588 Krtap3-3Q9D7P0 99 aa6.28□□□□□ -1.4
Vamp1-202ENSMUST00000063588 Kmt2cQ8BRH4 4903 aa6.28□□□□□ -1.4
Vamp1-202ENSMUST00000063588 Defb38Q7TNV7 63 aa6.27□□□□□ -1.41
Vamp1-202ENSMUST00000063588 Gm21798J3QNU5 87 aa6.26□□□□□ -1.41
Vamp1-202ENSMUST00000063588 D6Ertd527eA0A0N4SWI3 464 aa6.24□□□□□ -1.41
Vamp1-202ENSMUST00000063588 Gm11555B1AQ89 175 aa6.23□□□□□ -1.41
Vamp1-202ENSMUST00000063588 Fat3Q8BNA6 4555 aa6.22□□□□□ -1.41
Vamp1-202ENSMUST00000063588 Gm12216A0A1W2P827 62 aa6.22□□□□□ -1.41
Vamp1-202ENSMUST00000063588 A930033H14RikG5E8X6 103 aa6.22□□□□□ -1.41
Vamp1-202ENSMUST00000063588 Lrp1Q91ZX7 4545 aaKnown RBP6.2□□□□□ -1.42
Vamp1-202ENSMUST00000063588 Gm10999F6Q4M4 69 aa6.2□□□□□ -1.42
Vamp1-202ENSMUST00000063588 Gm5767A0A0J9YTU8 78 aa6.18□□□□□ -1.42
Vamp1-202ENSMUST00000063588 2310079G19RikQ9D6L6 185 aa6.15□□□□□ -1.43
Vamp1-202ENSMUST00000063588 Gm4491E0CX42 125 aa6.14□□□□□ -1.43
Vamp1-202ENSMUST00000063588 4930507D05RikQ8C9C9 103 aa6.14□□□□□ -1.43
Vamp1-202ENSMUST00000063588 Dnhd1D3Z2X2 4750 aa6.12□□□□□ -1.43
Vamp1-202ENSMUST00000063588 Gm20538F6Z9R1 75 aa6.1□□□□□ -1.43
Vamp1-202ENSMUST00000063588 Lce1mQ9CR91 182 aa6.09□□□□□ -1.43
Vamp1-202ENSMUST00000063588 Gm9736A0A1W2P7N1 277 aa6.07□□□□□ -1.44
Vamp1-202ENSMUST00000063588 Gm5965D3Z724 196 aa6.02□□□□□ -1.45
Vamp1-202ENSMUST00000063588 Rpl37Q9D823 97 aa6.02□□□□□ -1.45
Vamp1-202ENSMUST00000063588 Abca13Q5SSE9 5034 aa6.02□□□□□ -1.45
Vamp1-202ENSMUST00000063588 Herc2Q4U2R1 4836 aa6.01□□□□□ -1.45
Vamp1-202ENSMUST00000063588 Gm18596A0A1W2P860 280 aa5.99□□□□□ -1.45
Vamp1-202ENSMUST00000063588 Birc6O88738 4882 aa5.99□□□□□ -1.45
Vamp1-202ENSMUST00000063588 Mp68P56379 58 aa5.99□□□□□ -1.45
Vamp1-202ENSMUST00000063588 Rnase13Q5GAM7 153 aa5.97□□□□□ -1.45
Vamp1-202ENSMUST00000063588 Mycbp2Q7TPH6 4711 aa5.96□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 251.9 ms