RNA–Protein interactions for RNA: ENSMUST00000060274.6

Traf3-202, Transcript of TNF receptor-associated factor 3, mousemouse

TSL 5 BASIC

Gene Traf3, Length 6,896 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-202ENSMUST00000060274 Xirp2Q4U4S6 3784 aa5.16□□□□□ -1.58
Traf3-202ENSMUST00000060274 Hspg2Q05793 3707 aaKnown RBP5.15□□□□□ -1.58
Traf3-202ENSMUST00000060274 Stab1Q8R4Y4 2571 aa5.15□□□□□ -1.59
Traf3-202ENSMUST00000060274 Sprr1aQ62266 144 aa5.14□□□□□ -1.59
Traf3-202ENSMUST00000060274 Tep1P97499 2629 aa5.14□□□□□ -1.59
Traf3-202ENSMUST00000060274 Gm9195A0A140LHT4 2805 aa5.13□□□□□ -1.59
Traf3-202ENSMUST00000060274 Igsf10Q3V1M1 2594 aa5.11□□□□□ -1.59
Traf3-202ENSMUST00000060274 Krtap13O88375 197 aa5.09□□□□□ -1.59
Traf3-202ENSMUST00000060274 Tnp2P11378 117 aa5.09□□□□□ -1.59
Traf3-202ENSMUST00000060274 Col7a1Q63870 2944 aa5.09□□□□□ -1.6
Traf3-202ENSMUST00000060274 Myo18bE9PV66 2605 aa5.08□□□□□ -1.6
Traf3-202ENSMUST00000060274 Gcn1E9PVA8 2671 aaKnown RBP5.08□□□□□ -1.6
Traf3-202ENSMUST00000060274 Ank2Q8C8R3 3898 aa5.07□□□□□ -1.6
Traf3-202ENSMUST00000060274 Krtap14O08640 167 aa5.05□□□□□ -1.6
Traf3-202ENSMUST00000060274 Utp20Q5XG71 2788 aaKnown RBP5.03□□□□□ -1.6
Traf3-202ENSMUST00000060274 Gm2310J3QNJ2 377 aa5.03□□□□□ -1.6
Traf3-202ENSMUST00000060274 Mast4Q811L6 2618 aa5.02□□□□□ -1.61
Traf3-202ENSMUST00000060274 Gm2696A0A1W2P709 240 aa5.01□□□□□ -1.61
Traf3-202ENSMUST00000060274 Ubr5Q80TP3 2792 aa5□□□□□ -1.61
Traf3-202ENSMUST00000060274 OtogO55225 2910 aa4.99□□□□□ -1.61
Traf3-202ENSMUST00000060274 2310057N15RikQ9D6T8 200 aa4.99□□□□□ -1.61
Traf3-202ENSMUST00000060274 Gm40193A0A1B0GT39 78 aa4.98□□□□□ -1.61
Traf3-202ENSMUST00000060274 Celsr2Q9R0M0 2920 aa4.98□□□□□ -1.61
Traf3-202ENSMUST00000060274 Notch1Q01705 2531 aa4.98□□□□□ -1.61
Traf3-202ENSMUST00000060274 Map1aQ9QYR6 2776 aa4.97□□□□□ -1.61
Traf3-202ENSMUST00000060274 Prm2P07978 107 aa4.96□□□□□ -1.62
Traf3-202ENSMUST00000060274 Nbeal2Q6ZQA0 2742 aa4.96□□□□□ -1.62
Traf3-202ENSMUST00000060274 9530053A07RikE9PVG8 2581 aa4.94□□□□□ -1.62
Traf3-202ENSMUST00000060274 LrbaQ9ESE1 2856 aa4.91□□□□□ -1.62
Traf3-202ENSMUST00000060274 Gm5965D3Z724 196 aa4.9□□□□□ -1.62
Traf3-202ENSMUST00000060274 Muc2Q80Z19 2680 aa4.9□□□□□ -1.62
Traf3-202ENSMUST00000060274 Rps29P62274 56 aa4.88□□□□□ -1.63
Traf3-202ENSMUST00000060274 FlnaQ8BTM8 2647 aaKnown RBP4.88□□□□□ -1.63
Traf3-202ENSMUST00000060274 Csmd3Q80T79 3707 aa4.87□□□□□ -1.63
Traf3-202ENSMUST00000060274 D6Ertd527eA0A0N4SWI3 464 aa4.86□□□□□ -1.63
Traf3-202ENSMUST00000060274 Gm9918Q8BUR5 174 aa4.84□□□□□ -1.64
Traf3-202ENSMUST00000060274 Helz2E9QAM5 2947 aaKnown RBP4.83□□□□□ -1.64
Traf3-202ENSMUST00000060274 Chd6A3KFM7 2711 aa4.79□□□□□ -1.64
Traf3-202ENSMUST00000060274 NipblQ6KCD5 2798 aaKnown RBP4.78□□□□□ -1.64
Traf3-202ENSMUST00000060274 Gm20537G3UYK7 97 aa4.76□□□□□ -1.65
Traf3-202ENSMUST00000060274 4933428G20RikQ9D3X4 101 aa4.76□□□□□ -1.65
Traf3-202ENSMUST00000060274 Chd9Q8BYH8 2885 aa4.76□□□□□ -1.65
Traf3-202ENSMUST00000060274 FlncQ8VHX6 2726 aaKnown RBP4.76□□□□□ -1.65
Traf3-202ENSMUST00000060274 Igfn1Q3KNY0 2849 aa4.75□□□□□ -1.65
Traf3-202ENSMUST00000060274 Nf1Q04690 2841 aa4.74□□□□□ -1.65
Traf3-202ENSMUST00000060274 Gm10318A0A1W2P728 225 aa4.7□□□□□ -1.66
Traf3-202ENSMUST00000060274 B930094E09RikQ8C4T2 136 aa4.69□□□□□ -1.66
Traf3-202ENSMUST00000060274 Pdzd2E9Q1M1 2796 aa4.68□□□□□ -1.66
Traf3-202ENSMUST00000060274 Tenm4Q3UHK6 2771 aa4.67□□□□□ -1.66
Traf3-202ENSMUST00000060274 ApcQ61315 2845 aa4.67□□□□□ -1.66
Traf3-202ENSMUST00000060274 Pkd1l1Q8R526 2615 aa4.66□□□□□ -1.66
Traf3-202ENSMUST00000060274 Gm11565A2A4M7 156 aa4.66□□□□□ -1.66
Traf3-202ENSMUST00000060274 Fras1Q80T14 4010 aa4.62□□□□□ -1.67
Traf3-202ENSMUST00000060274 2310061N02RikQ9D6S9 174 aa4.62□□□□□ -1.67
Traf3-202ENSMUST00000060274 Fbn1Q61554 2873 aaKnown RBP4.6□□□□□ -1.67
Traf3-202ENSMUST00000060274 Stab2Q8R4U0 2559 aa4.59□□□□□ -1.67
Traf3-202ENSMUST00000060274 A930033H14RikG5E8X6 103 aa4.58□□□□□ -1.68
Traf3-202ENSMUST00000060274 Col6a5A6H584 2640 aa4.57□□□□□ -1.68
Traf3-202ENSMUST00000060274 Dnah6E9Q0B6 4144 aa4.57□□□□□ -1.68
Traf3-202ENSMUST00000060274 Itpr2Q9Z329 2701 aa4.56□□□□□ -1.68
Traf3-202ENSMUST00000060274 FcgbpE9Q0B5 2583 aa4.56□□□□□ -1.68
Traf3-202ENSMUST00000060274 TgO08710 2766 aa4.56□□□□□ -1.68
Traf3-202ENSMUST00000060274 Tenm3Q9WTS6 2715 aa4.54□□□□□ -1.68
Traf3-202ENSMUST00000060274 Tex15F8VPN2 2785 aa4.54□□□□□ -1.68
Traf3-202ENSMUST00000060274 Kmt2aP55200 3966 aa4.5□□□□□ -1.69
Traf3-202ENSMUST00000060274 Crct1Q6PAI5 102 aa4.5□□□□□ -1.69
Traf3-202ENSMUST00000060274 2310079G19RikQ9D6L6 185 aa4.49□□□□□ -1.69
Traf3-202ENSMUST00000060274 Srrm2Q8BTI8 2703 aaKnown RBP4.49□□□□□ -1.69
Traf3-202ENSMUST00000060274 VwfQ8CIZ8 2813 aa4.48□□□□□ -1.69
Traf3-202ENSMUST00000060274 Gm9736A0A1W2P7N1 277 aa4.46□□□□□ -1.7
Traf3-202ENSMUST00000060274 Sprr2kO70562 68 aa4.42□□□□□ -1.7
Traf3-202ENSMUST00000060274 PrkdcP97313 4128 aa4.41□□□□□ -1.7
Traf3-202ENSMUST00000060274 Hivep1Q03172 2688 aa4.4□□□□□ -1.7
Traf3-202ENSMUST00000060274 Dnah7bL7N1Y0 4068 aa4.39□□□□□ -1.71
Traf3-202ENSMUST00000060274 Dnah7aE9Q0T8 4024 aa4.35□□□□□ -1.71
Traf3-202ENSMUST00000060274 Gm18596A0A1W2P860 280 aa4.35□□□□□ -1.71
Traf3-202ENSMUST00000060274 Gm19668J3QMD1 248 aa4.34□□□□□ -1.71
Traf3-202ENSMUST00000060274 Tenm1Q9WTS4 2731 aa4.34□□□□□ -1.71
Traf3-202ENSMUST00000060274 Dnah10D3YYQ8 4591 aa4.32□□□□□ -1.72
Traf3-202ENSMUST00000060274 TnxbO35452 4006 aa4.31□□□□□ -1.72
Traf3-202ENSMUST00000060274 Gm17402F6Z0L5 76 aa4.31□□□□□ -1.72
Traf3-202ENSMUST00000060274 Gm6358A0A087WPH4 74 aa4.28□□□□□ -1.72
Traf3-202ENSMUST00000060274 Dnah3Q8BW94 4083 aa4.27□□□□□ -1.73
Traf3-202ENSMUST00000060274 Dnah7cA0A087WR13 4024 aa4.27□□□□□ -1.73
Traf3-202ENSMUST00000060274 Gm17416Q30KP4 66 aa4.27□□□□□ -1.73
Traf3-202ENSMUST00000060274 Dnah14A0A140LIJ4 4489 aa4.27□□□□□ -1.73
Traf3-202ENSMUST00000060274 Tenm2Q9WTS5 2764 aa4.26□□□□□ -1.73
Traf3-202ENSMUST00000060274 2210017I01RikA0A0A6YVV1 95 aa4.25□□□□□ -1.73
Traf3-202ENSMUST00000060274 Huwe1Q7TMY8 4377 aaKnown RBP4.25□□□□□ -1.73
Traf3-202ENSMUST00000060274 Muc6Q80T03 2850 aa4.25□□□□□ -1.73
Traf3-202ENSMUST00000060274 Dnah1E9Q8T7 4250 aa4.13□□□□□ -1.75
Traf3-202ENSMUST00000060274 Megf8P60882 2789 aa4.12□□□□□ -1.75
Traf3-202ENSMUST00000060274 Sprr2gO70558 76 aa4.1□□□□□ -1.75
Traf3-202ENSMUST00000060274 Gm19402J3QJV4 266 aa4.1□□□□□ -1.75
Traf3-202ENSMUST00000060274 Dync2h1Q45VK7 4306 aa4.08□□□□□ -1.76
Traf3-202ENSMUST00000060274 Vps13dB1ART2 4390 aa4.01□□□□□ -1.77
Traf3-202ENSMUST00000060274 Dnah9B1AR51 4484 aa4.01□□□□□ -1.77
Traf3-202ENSMUST00000060274 Dnah5Q8VHE6 4621 aa4.01□□□□□ -1.77
Traf3-202ENSMUST00000060274 Krtap13-1Q8K198 168 aa3.99□□□□□ -1.77
Traf3-202ENSMUST00000060274 Dnah11E9Q7N9 4488 aa3.99□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms