RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Pkd1l1Q8R526 2615 aa6.23□□□□□ -1.41
Gtf3c1-201ENSMUST00000055506 D6Ertd527eA0A0N4SWI3 464 aa6.22□□□□□ -1.41
Gtf3c1-201ENSMUST00000055506 LrbaQ9ESE1 2856 aa6.21□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Prm2P07978 107 aa6.21□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Trank1Q8BV79 2999 aa6.21□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Tex15F8VPN2 2785 aa6.19□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Itpr1P11881 2749 aa6.17□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Csmd1Q923L3 3564 aa6.16□□□□□ -1.42
Gtf3c1-201ENSMUST00000055506 Srrm2Q8BTI8 2703 aaKnown RBP6.15□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Gm2696A0A1W2P709 240 aa6.14□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Igfn1Q3KNY0 2849 aa6.11□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Col6a5A6H584 2640 aa6.11□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Tnp1P10856 55 aa6.09□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 Gm5965D3Z724 196 aa6.09□□□□□ -1.43
Gtf3c1-201ENSMUST00000055506 2310057N15RikQ9D6T8 200 aa6.09□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Gm11565A2A4M7 156 aa6.08□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Gm20537G3UYK7 97 aa6.08□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 NbeaQ9EPN1 2936 aa6.08□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Itpr2Q9Z329 2701 aa6.06□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 TgO08710 2766 aa6.06□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Celsr2Q9R0M0 2920 aa6.04□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Tnp2P11378 117 aa6.04□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 2310061N02RikQ9D6S9 174 aa6.03□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Akap9Q70FJ1 3797 aa6.03□□□□□ -1.44
Gtf3c1-201ENSMUST00000055506 Chd9Q8BYH8 2885 aa6.02□□□□□ -1.45
Gtf3c1-201ENSMUST00000055506 RelnQ60841 3461 aa5.97□□□□□ -1.45
Gtf3c1-201ENSMUST00000055506 Muc2Q80Z19 2680 aa5.96□□□□□ -1.46
Gtf3c1-201ENSMUST00000055506 Gm40193A0A1B0GT39 78 aa5.91□□□□□ -1.46
Gtf3c1-201ENSMUST00000055506 FcgbpE9Q0B5 2583 aa5.91□□□□□ -1.46
Gtf3c1-201ENSMUST00000055506 Hivep1Q03172 2688 aa5.9□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Zfhx4Q9JJN2 3550 aa5.89□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Rps29P62274 56 aa5.88□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Muc5acE9QAQ8 3455 aa5.85□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 SpenQ62504 3644 aaKnown RBP5.85□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 B930094E09RikQ8C4T2 136 aa5.85□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Gm9918Q8BUR5 174 aa5.84□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Smg1Q8BKX6 3658 aaKnown RBP5.84□□□□□ -1.47
Gtf3c1-201ENSMUST00000055506 Vps13cQ8BX70 3748 aa5.83□□□□□ -1.48
Gtf3c1-201ENSMUST00000055506 Helz2E9QAM5 2947 aaKnown RBP5.81□□□□□ -1.48
Gtf3c1-201ENSMUST00000055506 Nf1Q04690 2841 aa5.8□□□□□ -1.48
Gtf3c1-201ENSMUST00000055506 DmdP11531 3678 aa5.78□□□□□ -1.48
Gtf3c1-201ENSMUST00000055506 Pdzd2E9Q1M1 2796 aa5.75□□□□□ -1.49
Gtf3c1-201ENSMUST00000055506 FlncQ8VHX6 2726 aaKnown RBP5.73□□□□□ -1.49
Gtf3c1-201ENSMUST00000055506 Tenm1Q9WTS4 2731 aa5.72□□□□□ -1.49
Gtf3c1-201ENSMUST00000055506 Cmya5Q70KF4 3739 aa5.7□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 Gm10318A0A1W2P728 225 aa5.67□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 2310079G19RikQ9D6L6 185 aa5.66□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 Megf8P60882 2789 aa5.65□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 Gm9736A0A1W2P7N1 277 aa5.65□□□□□ -1.5
Gtf3c1-201ENSMUST00000055506 Tenm4Q3UHK6 2771 aa5.65□□□□□ -1.51
Gtf3c1-201ENSMUST00000055506 Tenm3Q9WTS6 2715 aa5.61□□□□□ -1.51
Gtf3c1-201ENSMUST00000055506 OtogO55225 2910 aa5.55□□□□□ -1.52
Gtf3c1-201ENSMUST00000055506 A930033H14RikG5E8X6 103 aa5.55□□□□□ -1.52
Gtf3c1-201ENSMUST00000055506 Lama5Q61001 3718 aa5.5□□□□□ -1.53
Gtf3c1-201ENSMUST00000055506 VwfQ8CIZ8 2813 aa5.49□□□□□ -1.53
Gtf3c1-201ENSMUST00000055506 Tenm2Q9WTS5 2764 aa5.46□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Svep1A2AVA0 3567 aa5.45□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Gm884A2A9H6 3643 aa5.44□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Csmd2V9GX34 3611 aa5.44□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Muc4Q8JZM8 3443 aa5.41□□□□□ -1.54
Gtf3c1-201ENSMUST00000055506 Crct1Q6PAI5 102 aa5.37□□□□□ -1.55
Gtf3c1-201ENSMUST00000055506 Fbn1Q61554 2873 aaKnown RBP5.35□□□□□ -1.55
Gtf3c1-201ENSMUST00000055506 4933428G20RikQ9D3X4 101 aa5.31□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 2210017I01RikA0A0A6YVV1 95 aa5.31□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 Gm19668J3QMD1 248 aa5.31□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 Gm17416Q30KP4 66 aa5.3□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 LystP97412 3788 aa5.29□□□□□ -1.56
Gtf3c1-201ENSMUST00000055506 CubnQ9JLB4 3623 aa5.27□□□□□ -1.57
Gtf3c1-201ENSMUST00000055506 Gm17402F6Z0L5 76 aa5.25□□□□□ -1.57
Gtf3c1-201ENSMUST00000055506 Col7a1Q63870 2944 aa5.21□□□□□ -1.58
Gtf3c1-201ENSMUST00000055506 Csmd3Q80T79 3707 aa5.16□□□□□ -1.58
Gtf3c1-201ENSMUST00000055506 Krtap13-1Q8K198 168 aa5.16□□□□□ -1.58
Gtf3c1-201ENSMUST00000055506 Gm6358A0A087WPH4 74 aa5.11□□□□□ -1.59
Gtf3c1-201ENSMUST00000055506 Gm11939A2A592 99 aa5.1□□□□□ -1.59
Gtf3c1-201ENSMUST00000055506 Gm18596A0A1W2P860 280 aa5.03□□□□□ -1.6
Gtf3c1-201ENSMUST00000055506 Krtap3-1A2A591 98 aa5.01□□□□□ -1.61
Gtf3c1-201ENSMUST00000055506 Hspg2Q05793 3707 aaKnown RBP4.99□□□□□ -1.61
Gtf3c1-201ENSMUST00000055506 Ank2Q8C8R3 3898 aa4.99□□□□□ -1.61
Gtf3c1-201ENSMUST00000055506 Krtap3-2Q9D638 99 aa4.93□□□□□ -1.62
Gtf3c1-201ENSMUST00000055506 Krtap3-3Q9D7P0 99 aa4.93□□□□□ -1.62
Gtf3c1-201ENSMUST00000055506 Krtap19-5O08632 62 aa4.93□□□□□ -1.62
Gtf3c1-201ENSMUST00000055506 Muc6Q80T03 2850 aa4.85□□□□□ -1.63
Gtf3c1-201ENSMUST00000055506 Krtap7-1Q9D3I6 87 aa4.82□□□□□ -1.64
Gtf3c1-201ENSMUST00000055506 Huwe1Q7TMY8 4377 aaKnown RBP4.76□□□□□ -1.65
Gtf3c1-201ENSMUST00000055506 Xirp2Q4U4S6 3784 aa4.76□□□□□ -1.65
Gtf3c1-201ENSMUST00000055506 Sprr2kO70562 68 aa4.73□□□□□ -1.65
Gtf3c1-201ENSMUST00000055506 Gm19402J3QJV4 266 aa4.69□□□□□ -1.66
Gtf3c1-201ENSMUST00000055506 Sprr2a3Q4KL71 83 aa4.63□□□□□ -1.67
Gtf3c1-201ENSMUST00000055506 Sprr2a1Q9CQK8 83 aa4.63□□□□□ -1.67
Gtf3c1-201ENSMUST00000055506 BsnO88737 3942 aa4.6□□□□□ -1.67
Gtf3c1-201ENSMUST00000055506 Dnah10D3YYQ8 4591 aa4.59□□□□□ -1.67
Gtf3c1-201ENSMUST00000055506 Dnah14A0A140LIJ4 4489 aa4.59□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 LorP18165 486 aa4.59□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 Krtap8-1O08633 61 aa4.58□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 Krtap19-9aF8WH65 55 aa4.57□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 Krtap12-1Q9Z287 130 aa4.56□□□□□ -1.68
Gtf3c1-201ENSMUST00000055506 Krtap1-5A2A590 122 aa4.51□□□□□ -1.69
Gtf3c1-201ENSMUST00000055506 Krtap19-9bQ99NG9 58 aa4.49□□□□□ -1.69
Gtf3c1-201ENSMUST00000055506 Lce1mQ9CR91 182 aa4.49□□□□□ -1.69
Gtf3c1-201ENSMUST00000055506 Krtap1-4Q3V2D6 188 aa4.47□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms